Dagstuhl Seminar Proceedings 05471

Computational Proteomics

C. G. Huber, O. Kohlbacher, K. Reinert (Eds.)

published by LZI
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ISSN  1862 - 4405

Dagstuhl Seminar 05471, 20.11. - 25.11.2005
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Authors
  • Altmeyer, Matthias
  • Böcker, Sebastian
  • Berger, Peter
  • Conrad, Tim
  • Delmotte, Nathanaël
  • Gröpl, Clemens
  • Hildebrandt, Andreas
  • Hofmann, Andreas
  • Huber, Christian G.
  • Klein, Christoph
  • Kohlbacher, Oliver
  • Lange, Eva
  • Lehmann, Wolf D.
  • Leinenbach, Andreas
  • Lenhof, Hans Peter
  • Mäkinen, Veli
  • Müller, Rolf
  • Mayr, Bettina
  • Oberacher, Herbert
  • Pfeifer, Nico
  • Quinten, Sascha
  • Rappsilber, Juri
  • Reinert, Knut
  • Salek, Mojiborahman
  • Schlüter, Hartmut
  • Schley, Christian
  • Schulz-Trieglaff, Ole
  • Sturm, Marc
  • Tholey, Andreas
  • Toll, Hansjörg
  • Wei, Junhua
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    05471 Abstract Collection -- Computational Proteomics
    Authors: Huber, Christian G. ; Kohlbacher, Oliver ; Reinert, Knut

    Abstract | Document (182 KB) | BibTeX

    05471 Executive Summary -- Computational Proteomics
    Authors: Huber, Christian G. ; Kohlbacher, Oliver ; Reinert, Knut

    Abstract | Document (126 KB) | BibTeX

    A machine learning approach for prediction of DNA and peptide HPLC retention times
    Authors: Sturm, Marc ; Quinten, Sascha ; Huber, Christian G. ; Kohlbacher, Oliver

    Abstract | Document (152 KB) | BibTeX

    An Algorithm for Feature Finding in LC/MS Raw Data
    Authors: Gröpl, Clemens

    Abstract | Document (523 KB) | BibTeX

    Combinatorial Approaches for Mass Spectra Recalibration
    Authors: Böcker, Sebastian ; Mäkinen, Veli

    Abstract | Document (126 KB) | BibTeX

    Evaluation of LC-MS data for the absolute quantitative analysis of marker proteins
    Authors: Delmotte, Nathanaël ; Mayr, Bettina ; Leinenbach, Andreas ; Reinert, Knut ; Kohlbacher, Oliver ; Klein, Christoph ; Huber, Christian G.

    Abstract | Document (49 KB) | BibTeX

    Future Challenges in Proteomics
    Authors: Schlüter, Hartmut

    Abstract | Document (63 KB) | BibTeX

    Glycosylation Patterns of Proteins Studied by Liquid Chromatography-Mass Spectrometry and Bioinformatic Tools
    Authors: Toll, Hansjörg ; Berger, Peter ; Hofmann, Andreas ; Hildebrandt, Andreas ; Oberacher, Herbert ; Lenhof, Hans Peter ; Huber, Christian G.

    Abstract | Document (117 KB) | BibTeX

    High-accuracy peak picking of proteomics data
    Authors: Lange, Eva ; Gröpl, Clemens ; Kohlbacher, Oliver ; Hildebrandt, Andreas

    Abstract | Document (102 KB) | BibTeX

    MALDI Mass Spectrometry for Quantitative Proteomics – Approaches, Scopes and Limitations
    Authors: Tholey, Andreas

    Abstract | Document (75 KB) | BibTeX

    MULTIDIMENSIONAL PEPTIDE/PROTEIN ANALYSIS AND IDENTIFICATION BY SEQUENCE DATABASE SEARCH USING MASS SPECTROMETRIC DATA
    Authors: Schley, Christian ; Altmeyer, Matthias ; Müller, Rolf ; Huber, Christian G.

    Abstract | Document (93 KB) | BibTeX

    New statistical algorithms for clinical proteomics
    Authors: Conrad, Tim

    Abstract | Document (128 KB) | BibTeX

    OpenMS - A Framework for Quantitative HPLC/MS-Based Proteomics
    Authors: Reinert, Knut ; Kohlbacher, Oliver ; Gröpl, Clemens ; Lange, Eva ; Schulz-Trieglaff, Ole ; Sturm, Marc ; Pfeifer, Nico

    Abstract | Document (240 KB) | BibTeX

    Software platforms for quantitative proteomics
    Authors: Schulz-Trieglaff, Ole

    Abstract | Document (136 KB) | BibTeX

    The Peptide MS/MS-Fragmentome: A Set of Predictable Fragment Ions with Highly Redundant Sequence Information
    Authors: Lehmann, Wolf D. ; Wei, Junhua ; Rappsilber, Juri ; Salek, Mojiborahman

    Abstract | Document (219 KB) | BibTeX

    		  



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