@InProceedings{gunady_et_al:LIPIcs.WABI.2017.10, author = {Gunady, Mohamed K. and Cornwell, Steffen and Mount, Stephen M. and Bravo, H\'{e}ctor Corrada}, title = {{Yanagi: Transcript Segment Library Construction for RNA-Seq Quantification}}, booktitle = {17th International Workshop on Algorithms in Bioinformatics (WABI 2017)}, pages = {10:1--10:14}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-050-7}, ISSN = {1868-8969}, year = {2017}, volume = {88}, editor = {Schwartz, Russell and Reinert, Knut}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2017.10}, URN = {urn:nbn:de:0030-drops-76487}, doi = {10.4230/LIPIcs.WABI.2017.10}, annote = {Keywords: RNA-Seq, Genome Sequencing, Kmer-based alignment, Transcriptome Quantification, Differential Alternative Splicing} }