@InProceedings{fan_et_al:LIPIcs.WABI.2021.4, author = {Fan, Jason and Chan, Skylar and Patro, Rob}, title = {{Perplexity: Evaluating Transcript Abundance Estimation in the Absence of Ground Truth}}, booktitle = {21st International Workshop on Algorithms in Bioinformatics (WABI 2021)}, pages = {4:1--4:22}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-200-6}, ISSN = {1868-8969}, year = {2021}, volume = {201}, editor = {Carbone, Alessandra and El-Kebir, Mohammed}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2021.4}, URN = {urn:nbn:de:0030-drops-143578}, doi = {10.4230/LIPIcs.WABI.2021.4}, annote = {Keywords: RNA-seq, transcript abundance estimation, model selection} }