@InProceedings{koster_et_al:OASIcs.GCB.2012.49, author = {K\"{o}ster, Johannes and Rahmann, Sven}, title = {{Building and Documenting Workflows with Python-Based Snakemake}}, booktitle = {German Conference on Bioinformatics 2012}, pages = {49--56}, series = {Open Access Series in Informatics (OASIcs)}, ISBN = {978-3-939897-44-6}, ISSN = {2190-6807}, year = {2012}, volume = {26}, editor = {B\"{o}cker, Sebastian and Hufsky, Franziska and Scheubert, Kerstin and Schleicher, Jana and Schuster, Stefan}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.GCB.2012.49}, URN = {urn:nbn:de:0030-drops-37179}, doi = {10.4230/OASIcs.GCB.2012.49}, annote = {Keywords: workflow engine, dependency graph, knapsack problem, Python, high-throughput sequencing, next-generation sequencing} }