@Proceedings{navarro_et_al:LIPIcs.CPM.2018, title = {{LIPIcs, Volume 105, CPM'18, Complete Volume}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018}, URN = {urn:nbn:de:0030-drops-89341}, doi = {10.4230/LIPIcs.CPM.2018}, annote = {Keywords: Mathematics of computing, Discrete mathematics, Information theory,Information systems, Information retrieval, Theory of computation} } @InProceedings{navarro_et_al:LIPIcs.CPM.2018.0, author = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, title = {{Front Matter, Table of Contents, Preface, Conference Organization}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {0:i--0:xvi}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.0}, URN = {urn:nbn:de:0030-drops-86849}, doi = {10.4230/LIPIcs.CPM.2018.0}, annote = {Keywords: Front Matter, Table of Contents, Preface, Conference Organization} } @InProceedings{sakai:LIPIcs.CPM.2018.1, author = {Sakai, Yoshifumi}, title = {{Maximal Common Subsequence Algorithms}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {1:1--1:10}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.1}, URN = {urn:nbn:de:0030-drops-87079}, doi = {10.4230/LIPIcs.CPM.2018.1}, annote = {Keywords: algorithms, string comparison, longest common subsequence, constrained longest common subsequence} } @InProceedings{henriques_et_al:LIPIcs.CPM.2018.2, author = {Henriques, Rui and Francisco, Alexandre P. and Russo, Lu{\'\i}s M. S. and Bannai, Hideo}, title = {{Order-Preserving Pattern Matching Indeterminate Strings}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {2:1--2:15}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.2}, URN = {urn:nbn:de:0030-drops-87087}, doi = {10.4230/LIPIcs.CPM.2018.2}, annote = {Keywords: Order-preserving pattern matching, Indeterminate string analysis, Generic pattern matching, Satisfiability} } @InProceedings{baier:LIPIcs.CPM.2018.3, author = {Baier, Uwe}, title = {{On Undetected Redundancy in the Burrows-Wheeler Transform}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {3:1--3:15}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.3}, URN = {urn:nbn:de:0030-drops-87049}, doi = {10.4230/LIPIcs.CPM.2018.3}, annote = {Keywords: Lossless data compression, BWT, Tunneling} } @InProceedings{amir_et_al:LIPIcs.CPM.2018.4, author = {Amir, Amihood and Levy, Avivit and Porat, Ely}, title = {{Quasi-Periodicity Under Mismatch Errors}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {4:1--4:15}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.4}, URN = {urn:nbn:de:0030-drops-87054}, doi = {10.4230/LIPIcs.CPM.2018.4}, annote = {Keywords: Periodicity, Quasi-Periodicity, Cover, Approximate Cover} } @InProceedings{brubach:LIPIcs.CPM.2018.5, author = {Brubach, Brian}, title = {{Fast Matching-based Approximations for Maximum Duo-Preservation String Mapping and its Weighted Variant}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {5:1--5:14}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.5}, URN = {urn:nbn:de:0030-drops-87066}, doi = {10.4230/LIPIcs.CPM.2018.5}, annote = {Keywords: approximation algorithm, maximum duo-preservation string mapping, minimum common string partition, string comparison, streaming algorithm, comparative genomics} } @InProceedings{blin_et_al:LIPIcs.CPM.2018.6, author = {Blin, Guillaume and Blondin Mass\'{e}, Alexandre and Gasparoux, Marie and Hamel, Sylvie and Vandomme, \'{E}lise}, title = {{Nearest constrained circular words}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {6:1--6:14}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.6}, URN = {urn:nbn:de:0030-drops-87035}, doi = {10.4230/LIPIcs.CPM.2018.6}, annote = {Keywords: Circular constrained alignments, Manhattan distance, Application to brachytherapy} } @InProceedings{bannai_et_al:LIPIcs.CPM.2018.7, author = {Bannai, Hideo and Gagie, Travis and I, Tomohiro}, title = {{Online LZ77 Parsing and Matching Statistics with RLBWTs}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {7:1--7:12}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.7}, URN = {urn:nbn:de:0030-drops-87025}, doi = {10.4230/LIPIcs.CPM.2018.7}, annote = {Keywords: Lempel-Ziv 1977, Matching Statistics, Run-Length Compressed Burrows-Wheeler Transform} } @InProceedings{hooshmand_et_al:LIPIcs.CPM.2018.8, author = {Hooshmand, Sahar and Abedin, Paniz and K\"{u}lekci, M. Oguzhan and Thankachan, Sharma V.}, title = {{Non-Overlapping Indexing - Cache Obliviously}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {8:1--8:9}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.8}, URN = {urn:nbn:de:0030-drops-87009}, doi = {10.4230/LIPIcs.CPM.2018.8}, annote = {Keywords: Suffix Trees, Cache Oblivious, Data Structure, String Algorithms} } @InProceedings{aoyama_et_al:LIPIcs.CPM.2018.9, author = {Aoyama, Kotaro and Nakashima, Yuto and I, Tomohiro and Inenaga, Shunsuke and Bannai, Hideo and Takeda, Masayuki}, title = {{Faster Online Elastic Degenerate String Matching}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {9:1--9:10}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.9}, URN = {urn:nbn:de:0030-drops-87016}, doi = {10.4230/LIPIcs.CPM.2018.9}, annote = {Keywords: elastic degenerate pattern matching, boolean convolution} } @InProceedings{akutsu_et_al:LIPIcs.CPM.2018.10, author = {Akutsu, Tatsuya and de la Higuera, Colin and Tamura, Takeyuki}, title = {{A Simple Linear-Time Algorithm for Computing the Centroid and Canonical Form of a Plane Graph and Its Applications}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {10:1--10:12}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.10}, URN = {urn:nbn:de:0030-drops-86992}, doi = {10.4230/LIPIcs.CPM.2018.10}, annote = {Keywords: Plane graph, Graph isomorphism, Maximum common subgraph} } @InProceedings{amir_et_al:LIPIcs.CPM.2018.11, author = {Amir, Amihood and Boneh, Itai}, title = {{Locally Maximal Common Factors as a Tool for Efficient Dynamic String Algorithms}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {11:1--11:13}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.11}, URN = {urn:nbn:de:0030-drops-86983}, doi = {10.4230/LIPIcs.CPM.2018.11}, annote = {Keywords: Dynamic Algorithms, Periodicity, Longest Common Factor, Priority Queue Data Structures, Suffix Tree, Balanced Search Tree, Range Maximum Queries} } @InProceedings{funakoshi_et_al:LIPIcs.CPM.2018.12, author = {Funakoshi, Mitsuru and Nakashima, Yuto and Inenaga, Shunsuke and Bannai, Hideo and Takeda, Masayuki}, title = {{Longest substring palindrome after edit}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {12:1--12:14}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.12}, URN = {urn:nbn:de:0030-drops-86977}, doi = {10.4230/LIPIcs.CPM.2018.12}, annote = {Keywords: maximal palindromes, edit operations, periodicity, suffix trees} } @InProceedings{brubach_et_al:LIPIcs.CPM.2018.13, author = {Brubach, Brian and Ghurye, Jay}, title = {{A Succinct Four Russians Speedup for Edit Distance Computation and One-against-many Banded Alignment}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {13:1--13:12}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.13}, URN = {urn:nbn:de:0030-drops-86965}, doi = {10.4230/LIPIcs.CPM.2018.13}, annote = {Keywords: edit distance, banded alignment, one-against-many alignment, genomics, method of the Four Russians} } @InProceedings{zhang_et_al:LIPIcs.CPM.2018.14, author = {Zhang, Shu and Zhu, Daming and Jiang, Haitao and Ma, Jingjing and Guo, Jiong and Feng, Haodi}, title = {{Can a permutation be sorted by best short swaps?}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {14:1--14:12}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.14}, URN = {urn:nbn:de:0030-drops-86957}, doi = {10.4230/LIPIcs.CPM.2018.14}, annote = {Keywords: Algorithm, Complexity, Short Swap, Permutation, Reversal} } @InProceedings{inoue_et_al:LIPIcs.CPM.2018.15, author = {Inoue, Takafumi and Inenaga, Shunsuke and Hyyr\"{o}, Heikki and Bannai, Hideo and Takeda, Masayuki}, title = {{Computing longest common square subsequences}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {15:1--15:13}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.15}, URN = {urn:nbn:de:0030-drops-86946}, doi = {10.4230/LIPIcs.CPM.2018.15}, annote = {Keywords: squares, subsequences, matching rectangles, dynamic programming} } @InProceedings{dudek_et_al:LIPIcs.CPM.2018.16, author = {Dudek, Bartlomiej and Gawrychowski, Pawel}, title = {{Slowing Down Top Trees for Better Worst-Case Compression}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {16:1--16:8}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.16}, URN = {urn:nbn:de:0030-drops-86920}, doi = {10.4230/LIPIcs.CPM.2018.16}, annote = {Keywords: top trees, compression, tree grammars} } @InProceedings{fertin_et_al:LIPIcs.CPM.2018.17, author = {Fertin, Guillaume and Fradin, Julien and Komusiewicz, Christian}, title = {{On the Maximum Colorful Arborescence Problem and Color Hierarchy Graph Structure}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {17:1--17:15}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.17}, URN = {urn:nbn:de:0030-drops-86939}, doi = {10.4230/LIPIcs.CPM.2018.17}, annote = {Keywords: Subgraph problem, computational complexity, algorithms, fixed-parameter tractability, kernelization} } @InProceedings{chikhi_et_al:LIPIcs.CPM.2018.18, author = {Chikhi, Rayan and Sch\"{o}nhuth, Alexander}, title = {{Dualities in Tree Representations}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {18:1--18:12}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.18}, URN = {urn:nbn:de:0030-drops-86901}, doi = {10.4230/LIPIcs.CPM.2018.18}, annote = {Keywords: Data Structures, Succinct Tree Representation, Balanced Parenthesis Representation, Isomorphisms} } @InProceedings{urabe_et_al:LIPIcs.CPM.2018.19, author = {Urabe, Yuki and Nakashima, Yuto and Inenaga, Shunsuke and Bannai, Hideo and Takeda, Masayuki}, title = {{Longest Lyndon Substring After Edit}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {19:1--19:10}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.19}, URN = {urn:nbn:de:0030-drops-86913}, doi = {10.4230/LIPIcs.CPM.2018.19}, annote = {Keywords: Lyndon word, Lyndon factorization, Lyndon tree, Edit operation} } @InProceedings{abedin_et_al:LIPIcs.CPM.2018.20, author = {Abedin, Paniz and Hooshmand, Sahar and Ganguly, Arnab and Thankachan, Sharma V.}, title = {{The Heaviest Induced Ancestors Problem Revisited}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {20:1--20:13}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.20}, URN = {urn:nbn:de:0030-drops-86898}, doi = {10.4230/LIPIcs.CPM.2018.20}, annote = {Keywords: Data Structure, String Algorithms, Orthogonal Range Queries} } @InProceedings{cazaux_et_al:LIPIcs.CPM.2018.21, author = {Cazaux, Bastien and Rivals, Eric}, title = {{Superstrings with multiplicities}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {21:1--21:16}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.21}, URN = {urn:nbn:de:0030-drops-86881}, doi = {10.4230/LIPIcs.CPM.2018.21}, annote = {Keywords: greedy algorithm, approximation, overlap, cyclic cover, APX, subset system} } @InProceedings{shin_et_al:LIPIcs.CPM.2018.22, author = {Shin, Kilho and Ishikawa, Taichi}, title = {{Linear-time algorithms for the subpath kernel}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {22:1--22:13}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.22}, URN = {urn:nbn:de:0030-drops-86877}, doi = {10.4230/LIPIcs.CPM.2018.22}, annote = {Keywords: tree, kernel, suffix tree} } @InProceedings{charalampopoulos_et_al:LIPIcs.CPM.2018.23, author = {Charalampopoulos, Panagiotis and Crochemore, Maxime and Iliopoulos, Costas S. and Kociumaka, Tomasz and Pissis, Solon P. and Radoszewski, Jakub and Rytter, Wojciech and Walen, Tomasz}, title = {{Linear-Time Algorithm for Long LCF with k Mismatches}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {23:1--23:16}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.23}, URN = {urn:nbn:de:0030-drops-86869}, doi = {10.4230/LIPIcs.CPM.2018.23}, annote = {Keywords: longest common factor, longest common substring, Hamming distance, heavy-light decomposition, difference cover} } @InProceedings{furuya_et_al:LIPIcs.CPM.2018.24, author = {Furuya, Isamu and Nakashima, Yuto and I, Tomohiro and Inenaga, Shunsuke and Bannai, Hideo and Takeda, Masayuki}, title = {{Lyndon Factorization of Grammar Compressed Texts Revisited}}, booktitle = {29th Annual Symposium on Combinatorial Pattern Matching (CPM 2018)}, pages = {24:1--24:10}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-074-3}, ISSN = {1868-8969}, year = {2018}, volume = {105}, editor = {Navarro, Gonzalo and Sankoff, David and Zhu, Binhai}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2018.24}, URN = {urn:nbn:de:0030-drops-86855}, doi = {10.4230/LIPIcs.CPM.2018.24}, annote = {Keywords: Lyndon word, Lyndon factorization, Straight line program} }