LIPIcs, Volume 113, WABI 2018

• Laxmi Parida and Esko Ukkonen LIPIcs, Volume 113, WABI'18, Complete Volume 10.4230/LIPIcs.WABI.2018
• Laxmi Parida and Esko Ukkonen Front Matter, Table of Contents, Preface, Conference Organization 10.4230/LIPIcs.WABI.2018.0
• Hooman Zabeti, Tamon Stephen, Bonnie Berger, and Leonid Chindelevitch A Duality-Based Method for Identifying Elemental Balance Violations in Metabolic Network Models 10.4230/LIPIcs.WABI.2018.1
• Christina Boucher, Travis Gagie, Alan Kuhnle, and Giovanni Manzini Prefix-Free Parsing for Building Big BWTs 10.4230/LIPIcs.WABI.2018.2
• Nicola Prezza, Nadia Pisanti, Marinella Sciortino, and Giovanna Rosone Detecting Mutations by eBWT 10.4230/LIPIcs.WABI.2018.3
• Jouni Sirén, Erik Garrison, Adam M. Novak, Benedict J. Paten, and Richard Durbin Haplotype-aware graph indexes 10.4230/LIPIcs.WABI.2018.4
• Riccardo Dondi, Manuel Lafond, and Celine Scornavacca Reconciling Multiple Genes Trees via Segmental Duplications and Losses 10.4230/LIPIcs.WABI.2018.5
• Tamal K. Dey and Sayan Mandal Protein Classification with Improved Topological Data Analysis 10.4230/LIPIcs.WABI.2018.6
• Barak Sternberg and Roded Sharan A Dynamic Algorithm for Network Propagation 10.4230/LIPIcs.WABI.2018.7
• Qiuyi (Richard) Zhang, Satish Rao, and Tandy Warnow New Absolute Fast Converging Phylogeny Estimation Methods with Improved Scalability and Accuracy 10.4230/LIPIcs.WABI.2018.8
• Yohei M. Rosen and Benedict J. Paten An Average-Case Sublinear Exact Li and Stephens Forward Algorithm 10.4230/LIPIcs.WABI.2018.9
• Lavinia Egidi, Felipe A. Louza, Giovanni Manzini, and Guilherme P. Telles External memory BWT and LCP computation for sequence collections with applications 10.4230/LIPIcs.WABI.2018.10
• Riku Walve, Pasi Rastas, and Leena Salmela Kermit: Guided Long Read Assembly using Coloured Overlap Graphs 10.4230/LIPIcs.WABI.2018.11
• Martin D. Muggli, Simon J. Puglisi, and Christina Boucher A Succinct Solution to Rmap Alignment 10.4230/LIPIcs.WABI.2018.12
• Till Hartmann and Sven Rahmann Spalter: A Meta Machine Learning Approach to Distinguish True DNA Variants from Sequencing Artefacts 10.4230/LIPIcs.WABI.2018.13
• Saugata Basu, Filippo Utro, and Laxmi Parida Essential Simplices in Persistent Homology and Subtle Admixture Detection 10.4230/LIPIcs.WABI.2018.14
• Tuukka Norri, Bastien Cazaux, Dmitry Kosolobov, and Veli Mäkinen Minimum Segmentation for Pan-genomic Founder Reconstruction in Linear Time 10.4230/LIPIcs.WABI.2018.15
• Martin S. Engler, Bertrand Caron, Lourens Veen, Daan P. Geerke, Alan E. Mark, and Gunnar W. Klau Multiple-Choice Knapsack for Assigning Partial Atomic Charges in Drug-Like Molecules 10.4230/LIPIcs.WABI.2018.16
• Stéphane Chrétien, Christophe Guyeux, and Serge Moulin l1-Penalised Ordinal Polytomous Regression Estimators with Application to Gene Expression Studies 10.4230/LIPIcs.WABI.2018.17
• Morteza Chalabi Hajkarim, Eli Upfal, and Fabio Vandin Differentially Mutated Subnetworks Discovery 10.4230/LIPIcs.WABI.2018.18
• Ryan A. Leo Elworth, Chabrielle Allen, Travis Benedict, Peter Dulworth, and Luay Nakhleh DGEN: A Test Statistic for Detection of General Introgression Scenarios 10.4230/LIPIcs.WABI.2018.19
• Mehrdad Mansouri, Julian Booth, Margaryta Vityaz, Cedric Chauve, and Leonid Chindelevitch PRINCE: Accurate Approximation of the Copy Number of Tandem Repeats 10.4230/LIPIcs.WABI.2018.20
• Mai Alzamel, Lorraine A. K. Ayad, Giulia Bernardini, Roberto Grossi, Costas S. Iliopoulos, Nadia Pisanti, Solon P. Pissis, and Giovanna Rosone Degenerate String Comparison and Applications 10.4230/LIPIcs.WABI.2018.21
• Nikolai Karpov, Salem Malikic, Md. Khaledur Rahman, and S. Cenk Sahinalp A Multi-labeled Tree Edit Distance for Comparing "Clonal Trees" of Tumor Progression 10.4230/LIPIcs.WABI.2018.22
• Kai Dührkop, Marie A. Lataretu, W. Timothy J. White, and Sebastian Böcker Heuristic Algorithms for the Maximum Colorful Subtree Problem 10.4230/LIPIcs.WABI.2018.23
• Mohammed El-Kebir Parsimonious Migration History Problem: Complexity and Algorithms 10.4230/LIPIcs.WABI.2018.24
• Szymon Majewski, Michal Aleksander Ciach, Michal Startek, Wanda Niemyska, Blazej Miasojedow, and Anna Gambin The Wasserstein Distance as a Dissimilarity Measure for Mass Spectra with Application to Spectral Deconvolution 10.4230/LIPIcs.WABI.2018.25