LIPIcs, Volume 172, WABI 2020
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Carl Kingsford and Nadia Pisanti
LIPIcs, Volume 172, WABI 2020, Complete Volume
10.4230/LIPIcs.WABI.2020
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Carl Kingsford and Nadia Pisanti
Front Matter, Table of Contents, Preface, Conference Organization
10.4230/LIPIcs.WABI.2020.0
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Galia R. Zimerman, Dina Svetlitsky, Meirav Zehavi, and Michal Ziv-Ukelson
Approximate Search for Known Gene Clusters in New Genomes Using PQ-Trees
10.4230/LIPIcs.WABI.2020.1
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Hooman Zabeti, Nick Dexter, Amir Hosein Safari, Nafiseh Sedaghat, Maxwell Libbrecht, and Leonid Chindelevitch
An Interpretable Classification Method for Predicting Drug Resistance in M. Tuberculosis
10.4230/LIPIcs.WABI.2020.2
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Diego P. Rubert, Fábio V. Martinez, and Marília D. V. Braga
Natural Family-Free Genomic Distance
10.4230/LIPIcs.WABI.2020.3
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Jens Zentgraf and Sven Rahmann
Fast Lightweight Accurate Xenograft Sorting
10.4230/LIPIcs.WABI.2020.4
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Leah L. Weber and Mohammed El-Kebir
Phyolin: Identifying a Linear Perfect Phylogeny in Single-Cell DNA Sequencing Data of Tumors
10.4230/LIPIcs.WABI.2020.5
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Sven Schrinner, Manish Goel, Michael Wulfert, Philipp Spohr, Korbinian Schneeberger, and Gunnar W. Klau
The Longest Run Subsequence Problem
10.4230/LIPIcs.WABI.2020.6
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Veli Mäkinen, Bastien Cazaux, Massimo Equi, Tuukka Norri, and Alexandru I. Tomescu
Linear Time Construction of Indexable Founder Block Graphs
10.4230/LIPIcs.WABI.2020.7
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Vijini G. Mallawaarachchi, Anuradha S. Wickramarachchi, and Yu Lin
GraphBin2: Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs
10.4230/LIPIcs.WABI.2020.8
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Kingshuk Mukherjee, Massimiliano Rossi, Leena Salmela, and Christina Boucher
Fast and Efficient Rmap Assembly Using the Bi-Labelled de Bruijn Graph
10.4230/LIPIcs.WABI.2020.9
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Thomas Gatter, Sarah von Löhneysen, Polina Drozdova, Tom Hartmann, and Peter F. Stadler
Economic Genome Assembly from Low Coverage Illumina and Nanopore Data
10.4230/LIPIcs.WABI.2020.10
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Yoann Dufresne, Chen Sun, Pierre Marijon, Dominique Lavenier, Cedric Chauve, and Rayan Chikhi
A Graph-Theoretic Barcode Ordering Model for Linked-Reads
10.4230/LIPIcs.WABI.2020.11
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Cong Ma, Hongyu Zheng, and Carl Kingsford
Exact Transcript Quantification Over Splice Graphs
10.4230/LIPIcs.WABI.2020.12
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Leonie Selbach, Tobias Kowalski, Klaus Gerwert, Maike Buchin, and Axel Mosig
Shape Decomposition Algorithms for Laser Capture Microdissection
10.4230/LIPIcs.WABI.2020.13
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Katharina Jahn, Niko Beerenwinkel, and Louxin Zhang
The Bourque Distances for Mutation Trees of Cancers
10.4230/LIPIcs.WABI.2020.14
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Xilin Yu, Thien Le, Sarah Christensen, Erin K. Molloy, and Tandy Warnow
Advancing Divide-And-Conquer Phylogeny Estimation Using Robinson-Foulds Supertrees
10.4230/LIPIcs.WABI.2020.15
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Amatur Rahman, Rayan Chikhi, and Paul Medvedev
Disk Compression of k-mer Sets
10.4230/LIPIcs.WABI.2020.16
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Arun Ganesh and Aaron Sy
Near-Linear Time Edit Distance for Indel Channels
10.4230/LIPIcs.WABI.2020.17
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Trevor S. Frisby and Christopher J. Langmead
Fold Family-Regularized Bayesian Optimization for Directed Protein Evolution
10.4230/LIPIcs.WABI.2020.18
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Domenico Cantone, Simone Faro, and Arianna Pavone
Sequence Searching Allowing for Non-Overlapping Adjacent Unbalanced Translocations
10.4230/LIPIcs.WABI.2020.19