LIPIcs, Volume 242, WABI 2022

• Christina Boucher and Sven Rahmann LIPIcs, Volume 242, WABI 2022, Complete Volume 10.4230/LIPIcs.WABI.2022
• Christina Boucher and Sven Rahmann Front Matter, Table of Contents, Preface, Conference Organization 10.4230/LIPIcs.WABI.2022.0
• Leena Salmela Efficient Solutions to Biological Problems Using de Bruijn Graphs (Invited Talk) 10.4230/LIPIcs.WABI.2022.1
• Sebastian Schmidt and Jarno N. Alanko Eulertigs: Minimum Plain Text Representation of k-mer Sets Without Repetitions in Linear Time 10.4230/LIPIcs.WABI.2022.2
• Alitzel López Sánchez and Manuel Lafond Predicting Horizontal Gene Transfers with Perfect Transfer Networks 10.4230/LIPIcs.WABI.2022.3
• Ahsan Sanaullah, Degui Zhi, and Shaoije Zhang Haplotype Threading Using the Positional Burrows-Wheeler Transform 10.4230/LIPIcs.WABI.2022.4
• Mathieu Gascon and Nadia El-Mabrouk Non-Binary Tree Reconciliation with Endosymbiotic Gene Transfer 10.4230/LIPIcs.WABI.2022.5
• Konstantinn Bonnet, Tobias Marschall, and Daniel Doerr¹ Constructing Founder Sets Under Allelic and Non-Allelic Homologous Recombination 10.4230/LIPIcs.WABI.2022.6
• Bertrand Marchand, Sebastian Will, Sarah J. Berkemer, Laurent Bulteau, and Yann Ponty Automated Design of Dynamic Programming Schemes for RNA Folding with Pseudoknots 10.4230/LIPIcs.WABI.2022.7
• Baqiao Liu and Tandy Warnow Fast and Accurate Species Trees from Weighted Internode Distances 10.4230/LIPIcs.WABI.2022.8
• Giulio Ermanno Pibiri On Weighted k-mer Dictionaries 10.4230/LIPIcs.WABI.2022.9
• Yoshihiko Suzuki and Gene Myers Accurate k-mer Classification Using Read Profiles 10.4230/LIPIcs.WABI.2022.10
• Eden Ozery, Meirav Zehavi, and Michal Ziv-Ukelson New Algorithms for Structure Informed Genome Rearrangement 10.4230/LIPIcs.WABI.2022.11
• Jens Zentgraf and Sven Rahmann Fast Gapped k-mer Counting with Subdivided Multi-Way Bucketed Cuckoo Hash Tables 10.4230/LIPIcs.WABI.2022.12
• Marília D. V. Braga, Leonie R. Brockmann, Katharina Klerx, and Jens Stoye A Linear Time Algorithm for an Extended Version of the Breakpoint Double Distance 10.4230/LIPIcs.WABI.2022.13
• Yoshihiro Shibuya, Djamal Belazzougui, and Gregory Kucherov Efficient Reconciliation of Genomic Datasets of High Similarity 10.4230/LIPIcs.WABI.2022.14
• Wei Wei and David Koslicki WGSUniFrac: Applying UniFrac Metric to Whole Genome Shotgun Data 10.4230/LIPIcs.WABI.2022.15
• Giulia Bernardini, Leo van Iersel, Esther Julien, and Leen Stougie Reconstructing Phylogenetic Networks via Cherry Picking and Machine Learning 10.4230/LIPIcs.WABI.2022.16
• Daniel Gibney, Sharma V. Thankachan, and Srinivas Aluru Feasibility of Flow Decomposition with Subpath Constraints in Linear Time 10.4230/LIPIcs.WABI.2022.17
• Adrián Goga and Andrej Baláž Prefix-Free Parsing for Building Large Tunnelled Wheeler Graphs 10.4230/LIPIcs.WABI.2022.18
• Taher Mun, Naga Sai Kavya Vaddadi, and Ben Langmead Pangenomic Genotyping with the Marker Array 10.4230/LIPIcs.WABI.2022.19
• Zsuzsanna Lipták, Francesco Masillo, and Simon J. Puglisi Suffix Sorting via Matching Statistics 10.4230/LIPIcs.WABI.2022.20
• Pijus Simonaitis and Benjamin J. Raphael A Maximum Parsimony Principle for Multichromosomal Complex Genome Rearrangements 10.4230/LIPIcs.WABI.2022.21
• Ke Chen and Mingfu Shao Locality-Sensitive Bucketing Functions for the Edit Distance 10.4230/LIPIcs.WABI.2022.22
• Veronica Guerrini, Alessio Conte, Roberto Grossi, Gianni Liti, Giovanna Rosone, and Lorenzo Tattini phyBWT: Alignment-Free Phylogeny via eBWT Positional Clustering 10.4230/LIPIcs.WABI.2022.23
• Diego P. Rubert and Marília D. V. Braga Gene Orthology Inference via Large-Scale Rearrangements for Partially Assembled Genomes 10.4230/LIPIcs.WABI.2022.24
• Clément Agret, Bastien Cazaux, and Antoine Limasset Toward Optimal Fingerprint Indexing for Large Scale Genomics 10.4230/LIPIcs.WABI.2022.25