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        <identifier>oai:drops-oai.dagstuhl.de:12130</identifier>
        <datestamp>2024-03-06T10:49:22Z</datestamp>
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          <dc:title>Time-Space Tradeoffs for Finding a Long Common Substring</dc:title>
          <dc:creator>Ben-Nun, Stav</dc:creator>
          <dc:creator>Golan, Shay</dc:creator>
          <dc:creator>Kociumaka, Tomasz</dc:creator>
          <dc:creator>Kraus, Matan</dc:creator>
          <dc:subject>longest common substring</dc:subject>
          <dc:subject>time-space tradeoff</dc:subject>
          <dc:subject>local consistency</dc:subject>
          <dc:subject>periodicity</dc:subject>
          <dc:description>We consider the problem of finding, given two documents of total length n, a longest string occurring as a substring of both documents. This problem, known as the Longest Common Substring (LCS) problem, has a classic 𝒪(n)-time solution dating back to the discovery of suffix trees (Weiner, 1973) and their efficient construction for integer alphabets (Farach-Colton, 1997). However, these solutions require Θ(n) space, which is prohibitive in many applications. To address this issue, Starikovskaya and Vildhøj (CPM 2013) showed that for n^{2/3} ≤ s ≤ n, the LCS problem can be solved in 𝒪(s) space and 𝒪̃(n²/s) time. Kociumaka et al. (ESA 2014) generalized this tradeoff to 1 ≤ s ≤ n, thus providing a smooth time-space tradeoff from constant to linear space. In this paper, we obtain a significant speed-up for instances where the length L of the sought LCS is large. For 1 ≤ s ≤ n, we show that the LCS problem can be solved in 𝒪(s) space and 𝒪̃(n²/(L⋅s) +n) time. The result is based on techniques originating from the LCS with Mismatches problem (Flouri et al., 2015; Charalampopoulos et al., CPM 2018), on space-efficient locally consistent parsing (Birenzwige et al., SODA 2020), and on the structure of maximal repetitions (runs) in the input documents.</dc:description>
          <dc:publisher>Schloss Dagstuhl – Leibniz-Zentrum für Informatik</dc:publisher>
          <dc:contributor>Stav Ben-Nun and Shay Golan and Tomasz Kociumaka and Matan Kraus</dc:contributor>
          <dc:date>2020</dc:date>
          <dc:relation>Is Part Of LIPIcs, Volume 161, 31st Annual Symposium on Combinatorial Pattern Matching (CPM 2020)</dc:relation>
          <dc:type>InProceedings</dc:type>
          <dc:type>Text</dc:type>
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          <dc:identifier>doi:10.4230/LIPIcs.CPM.2020.5</dc:identifier>
          <dc:identifier>urn:nbn:de:0030-drops-121302</dc:identifier>
          <dc:identifier>https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2020.5</dc:identifier>
          <dc:language>eng</dc:language>
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