7 Search Results for "Daniel, Jakub"

Document
DOI: 10.4230/LIPIcs.STACS.2024.7
Computing Twin-Width Parameterized by the Feedback Edge Number

Authors: Jakub Balabán, Robert Ganian, and Mathis Rocton

Published in: LIPIcs, Volume 289, 41st International Symposium on Theoretical Aspects of Computer Science (STACS 2024)

Abstract
The problem of whether and how one can compute the twin-width of a graph - along with an accompanying contraction sequence - lies at the forefront of the area of algorithmic model theory. While significant effort has been aimed at obtaining a fixed-parameter approximation for the problem when parameterized by twin-width, here we approach the question from a different perspective and consider whether one can obtain (near-)optimal contraction sequences under a larger parameterization, notably the feedback edge number k. As our main contributions, under this parameterization we obtain (1) a linear bikernel for the problem of either computing a 2-contraction sequence or determining that none exists and (2) an approximate fixed-parameter algorithm which computes an 𝓁-contraction sequence (for an arbitrary specified 𝓁) or determines that the twin-width of the input graph is at least 𝓁. These algorithmic results rely on newly obtained insights into the structure of optimal contraction sequences, and as a byproduct of these we also slightly tighten the bound on the twin-width of graphs with small feedback edge number.
Cite as

Jakub Balabán, Robert Ganian, and Mathis Rocton. Computing Twin-Width Parameterized by the Feedback Edge Number. In 41st International Symposium on Theoretical Aspects of Computer Science (STACS 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 289, pp. 7:1-7:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@InProceedings{balaban_et_al:LIPIcs.STACS.2024.7,
  author =	{Balab\'{a}n, Jakub and Ganian, Robert and Rocton, Mathis},
  title =	{{Computing Twin-Width Parameterized by the Feedback Edge Number}},
  booktitle =	{41st International Symposium on Theoretical Aspects of Computer Science (STACS 2024)},
  pages =	{7:1--7:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-311-9},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{289},
  editor =	{Beyersdorff, Olaf and Kant\'{e}, Mamadou Moustapha and Kupferman, Orna and Lokshtanov, Daniel},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2024.7},
  URN =		{urn:nbn:de:0030-drops-197170},
  doi =		{10.4230/LIPIcs.STACS.2024.7},
  annote =	{Keywords: twin-width, parameterized complexity, kernelization, feedback edge number}
}
Document
DOI: 10.4230/LIPIcs.STACS.2024.24
Approximate Circular Pattern Matching Under Edit Distance

Authors: Panagiotis Charalampopoulos, Solon P. Pissis, Jakub Radoszewski, Wojciech Rytter, Tomasz Waleń, and Wiktor Zuba

Published in: LIPIcs, Volume 289, 41st International Symposium on Theoretical Aspects of Computer Science (STACS 2024)

Abstract
In the k-Edit Circular Pattern Matching (k-Edit CPM) problem, we are given a length-n text T, a length-m pattern P, and a positive integer threshold k, and we are to report all starting positions of the substrings of T that are at edit distance at most k from some cyclic rotation of P. In the decision version of the problem, we are to check if any such substring exists. Very recently, Charalampopoulos et al. [ESA 2022] presented 𝒪(nk²)-time and 𝒪(nk log³ k)-time solutions for the reporting and decision versions of k-Edit CPM, respectively. Here, we show that the reporting and decision versions of k-Edit CPM can be solved in 𝒪(n+(n/m) k⁶) time and 𝒪(n+(n/m) k⁵ log³ k) time, respectively, thus obtaining the first algorithms with a complexity of the type 𝒪(n+(n/m) poly(k)) for this problem. Notably, our algorithms run in 𝒪(n) time when m = Ω(k⁶) and are superior to the previous respective solutions when m = ω(k⁴). We provide a meta-algorithm that yields efficient algorithms in several other interesting settings, such as when the strings are given in a compressed form (as straight-line programs), when the strings are dynamic, or when we have a quantum computer. We obtain our solutions by exploiting the structure of approximate circular occurrences of P in T, when T is relatively short w.r.t. P. Roughly speaking, either the starting positions of approximate occurrences of rotations of P form 𝒪(k⁴) intervals that can be computed efficiently, or some rotation of P is almost periodic (is at a small edit distance from a string with small period). Dealing with the almost periodic case is the most technically demanding part of this work; we tackle it using properties of locked fragments (originating from [Cole and Hariharan, SICOMP 2002]).
Cite as

Panagiotis Charalampopoulos, Solon P. Pissis, Jakub Radoszewski, Wojciech Rytter, Tomasz Waleń, and Wiktor Zuba. Approximate Circular Pattern Matching Under Edit Distance. In 41st International Symposium on Theoretical Aspects of Computer Science (STACS 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 289, pp. 24:1-24:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@InProceedings{charalampopoulos_et_al:LIPIcs.STACS.2024.24,
  author =	{Charalampopoulos, Panagiotis and Pissis, Solon P. and Radoszewski, Jakub and Rytter, Wojciech and Wale\'{n}, Tomasz and Zuba, Wiktor},
  title =	{{Approximate Circular Pattern Matching Under Edit Distance}},
  booktitle =	{41st International Symposium on Theoretical Aspects of Computer Science (STACS 2024)},
  pages =	{24:1--24:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-311-9},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{289},
  editor =	{Beyersdorff, Olaf and Kant\'{e}, Mamadou Moustapha and Kupferman, Orna and Lokshtanov, Daniel},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2024.24},
  URN =		{urn:nbn:de:0030-drops-197346},
  doi =		{10.4230/LIPIcs.STACS.2024.24},
  annote =	{Keywords: circular pattern matching, approximate pattern matching, edit distance}
}
Document
DOI: 10.4230/LIPIcs.STACS.2024.34
Hardness of Linearly Ordered 4-Colouring of 3-Colourable 3-Uniform Hypergraphs

Authors: Marek Filakovský, Tamio-Vesa Nakajima, Jakub Opršal, Gianluca Tasinato, and Uli Wagner

Published in: LIPIcs, Volume 289, 41st International Symposium on Theoretical Aspects of Computer Science (STACS 2024)

Abstract
A linearly ordered (LO) k-colouring of a hypergraph is a colouring of its vertices with colours 1, … , k such that each edge contains a unique maximal colour. Deciding whether an input hypergraph admits LO k-colouring with a fixed number of colours is NP-complete (and in the special case of graphs, LO colouring coincides with the usual graph colouring). Here, we investigate the complexity of approximating the "linearly ordered chromatic number" of a hypergraph. We prove that the following promise problem is NP-complete: Given a 3-uniform hypergraph, distinguish between the case that it is LO 3-colourable, and the case that it is not even LO 4-colourable. We prove this result by a combination of algebraic, topological, and combinatorial methods, building on and extending a topological approach for studying approximate graph colouring introduced by Krokhin, Opršal, Wrochna, and Živný (2023).
Cite as

Marek Filakovský, Tamio-Vesa Nakajima, Jakub Opršal, Gianluca Tasinato, and Uli Wagner. Hardness of Linearly Ordered 4-Colouring of 3-Colourable 3-Uniform Hypergraphs. In 41st International Symposium on Theoretical Aspects of Computer Science (STACS 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 289, pp. 34:1-34:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@InProceedings{filakovsky_et_al:LIPIcs.STACS.2024.34,
  author =	{Filakovsk\'{y}, Marek and Nakajima, Tamio-Vesa and Opr\v{s}al, Jakub and Tasinato, Gianluca and Wagner, Uli},
  title =	{{Hardness of Linearly Ordered 4-Colouring of 3-Colourable 3-Uniform Hypergraphs}},
  booktitle =	{41st International Symposium on Theoretical Aspects of Computer Science (STACS 2024)},
  pages =	{34:1--34:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-311-9},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{289},
  editor =	{Beyersdorff, Olaf and Kant\'{e}, Mamadou Moustapha and Kupferman, Orna and Lokshtanov, Daniel},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2024.34},
  URN =		{urn:nbn:de:0030-drops-197445},
  doi =		{10.4230/LIPIcs.STACS.2024.34},
  annote =	{Keywords: constraint satisfaction problem, hypergraph colouring, promise problem, topological methods}
}
Document
DOI: 10.4230/LIPIcs.MFCS.2020.22
Simplified Game of Life: Algorithms and Complexity

Authors: Krishnendu Chatterjee, Rasmus Ibsen-Jensen, Ismaël Jecker, and Jakub Svoboda

Published in: LIPIcs, Volume 170, 45th International Symposium on Mathematical Foundations of Computer Science (MFCS 2020)

Abstract
Game of Life is a simple and elegant model to study dynamical system over networks. The model consists of a graph where every vertex has one of two types, namely, dead or alive. A configuration is a mapping of the vertices to the types. An update rule describes how the type of a vertex is updated given the types of its neighbors. In every round, all vertices are updated synchronously, which leads to a configuration update. While in general, Game of Life allows a broad range of update rules, we focus on two simple families of update rules, namely, underpopulation and overpopulation, that model several interesting dynamics studied in the literature. In both settings, a dead vertex requires at least a desired number of live neighbors to become alive. For underpopulation (resp., overpopulation), a live vertex requires at least (resp. at most) a desired number of live neighbors to remain alive. We study the basic computation problems, e.g., configuration reachability, for these two families of rules. For underpopulation rules, we show that these problems can be solved in polynomial time, whereas for overpopulation rules they are PSPACE-complete.
Cite as

Krishnendu Chatterjee, Rasmus Ibsen-Jensen, Ismaël Jecker, and Jakub Svoboda. Simplified Game of Life: Algorithms and Complexity. In 45th International Symposium on Mathematical Foundations of Computer Science (MFCS 2020). Leibniz International Proceedings in Informatics (LIPIcs), Volume 170, pp. 22:1-22:13, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2020)

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@InProceedings{chatterjee_et_al:LIPIcs.MFCS.2020.22,
  author =	{Chatterjee, Krishnendu and Ibsen-Jensen, Rasmus and Jecker, Isma\"{e}l and Svoboda, Jakub},
  title =	{{Simplified Game of Life: Algorithms and Complexity}},
  booktitle =	{45th International Symposium on Mathematical Foundations of Computer Science (MFCS 2020)},
  pages =	{22:1--22:13},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-159-7},
  ISSN =	{1868-8969},
  year =	{2020},
  volume =	{170},
  editor =	{Esparza, Javier and Kr\'{a}l', Daniel},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops-dev.dagstuhl.de/entities/document/10.4230/LIPIcs.MFCS.2020.22},
  URN =		{urn:nbn:de:0030-drops-126903},
  doi =		{10.4230/LIPIcs.MFCS.2020.22},
  annote =	{Keywords: game of life, cellular automata, computational complexity, dynamical systems}
}
Document
DOI: 10.4230/LIPIcs.MFCS.2020.52
A Complexity Dichotomy for Permutation Pattern Matching on Grid Classes

Authors: Vít Jelínek, Michal Opler, and Jakub Pekárek

Published in: LIPIcs, Volume 170, 45th International Symposium on Mathematical Foundations of Computer Science (MFCS 2020)

Abstract
Permutation Pattern Matching (PPM) is the problem of deciding for a given pair of permutations π and τ whether the pattern π is contained in the text τ. Bose, Buss and Lubiw showed that PPM is NP-complete. In view of this result, it is natural to ask how the situation changes when we restrict the pattern π to a fixed permutation class 𝒞; this is known as the 𝒞-Pattern PPM problem. There have been several results in this direction, namely the work of Jelínek and Kynčl who completely resolved the hardness of 𝒞-Pattern PPM when 𝒞 is taken to be the class of σ-avoiding permutations for some σ. Grid classes are special kind of permutation classes, consisting of permutations admitting a grid-like decomposition into simpler building blocks. Of particular interest are the so-called monotone grid classes, in which each building block is a monotone sequence. Recently, it has been discovered that grid classes, especially the monotone ones, play a fundamental role in the understanding of the structure of general permutation classes. This motivates us to study the hardness of 𝒞-Pattern PPM for a (monotone) grid class 𝒞. We provide a complexity dichotomy for 𝒞-Pattern PPM when 𝒞 is taken to be a monotone grid class. Specifically, we show that the problem is polynomial-time solvable if a certain graph associated with 𝒞, called the cell graph, is a forest, and it is NP-complete otherwise. We further generalize our results to grid classes whose blocks belong to classes of bounded grid-width. We show that the 𝒞-Pattern PPM for such a grid class 𝒞 is polynomial-time solvable if the cell graph of 𝒞 avoids a cycle or a certain special type of path, and it is NP-complete otherwise.
Cite as

Vít Jelínek, Michal Opler, and Jakub Pekárek. A Complexity Dichotomy for Permutation Pattern Matching on Grid Classes. In 45th International Symposium on Mathematical Foundations of Computer Science (MFCS 2020). Leibniz International Proceedings in Informatics (LIPIcs), Volume 170, pp. 52:1-52:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2020)

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@InProceedings{jelinek_et_al:LIPIcs.MFCS.2020.52,
  author =	{Jel{\'\i}nek, V{\'\i}t and Opler, Michal and Pek\'{a}rek, Jakub},
  title =	{{A Complexity Dichotomy for Permutation Pattern Matching on Grid Classes}},
  booktitle =	{45th International Symposium on Mathematical Foundations of Computer Science (MFCS 2020)},
  pages =	{52:1--52:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-159-7},
  ISSN =	{1868-8969},
  year =	{2020},
  volume =	{170},
  editor =	{Esparza, Javier and Kr\'{a}l', Daniel},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops-dev.dagstuhl.de/entities/document/10.4230/LIPIcs.MFCS.2020.52},
  URN =		{urn:nbn:de:0030-drops-127186},
  doi =		{10.4230/LIPIcs.MFCS.2020.52},
  annote =	{Keywords: permutations, pattern matching, grid classes}
}
Document
DOI: 10.4230/LIPIcs.MFCS.2018.29
Recovering Sparse Graphs

Authors: Jakub Gajarský and Daniel Král'

Published in: LIPIcs, Volume 117, 43rd International Symposium on Mathematical Foundations of Computer Science (MFCS 2018)

Abstract
We construct a fixed parameter algorithm parameterized by d and k that takes as an input a graph G' obtained from a d-degenerate graph G by complementing on at most k arbitrary subsets of the vertex set of G and outputs a graph H such that G and H agree on all but f(d,k) vertices. Our work is motivated by the first order model checking in graph classes that are first order interpretable in classes of sparse graphs. We derive as a corollary that if G is a graph class with bounded expansion, then the first order model checking is fixed parameter tractable in the class of all graphs that can obtained from a graph G in G by complementing on at most k arbitrary subsets of the vertex set of G; this implies an earlier result that the first order model checking is fixed parameter tractable in graph classes interpretable in classes of graphs with bounded maximum degree.
Cite as

Jakub Gajarský and Daniel Král'. Recovering Sparse Graphs. In 43rd International Symposium on Mathematical Foundations of Computer Science (MFCS 2018). Leibniz International Proceedings in Informatics (LIPIcs), Volume 117, pp. 29:1-29:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2018)

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@InProceedings{gajarsky_et_al:LIPIcs.MFCS.2018.29,
  author =	{Gajarsk\'{y}, Jakub and Kr\'{a}l', Daniel},
  title =	{{Recovering Sparse Graphs}},
  booktitle =	{43rd International Symposium on Mathematical Foundations of Computer Science (MFCS 2018)},
  pages =	{29:1--29:15},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-086-6},
  ISSN =	{1868-8969},
  year =	{2018},
  volume =	{117},
  editor =	{Potapov, Igor and Spirakis, Paul and Worrell, James},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops-dev.dagstuhl.de/entities/document/10.4230/LIPIcs.MFCS.2018.29},
  URN =		{urn:nbn:de:0030-drops-96111},
  doi =		{10.4230/LIPIcs.MFCS.2018.29},
  annote =	{Keywords: model checking, degenerate graphs, interpretations, bounded expansion}
}
Document
DOI: 10.4230/OASIcs.ICCSW.2014.27
Predicate Abstraction in Program Verification: Survey and Current Trends

Authors: Jakub Daniel and Pavel Parízek

Published in: OASIcs, Volume 43, 2014 Imperial College Computing Student Workshop

Abstract
A popular approach to verification of software system correctness is model checking. To achieve scalability needed for large systems, model checking has to be augmented with abstraction. In this paper, we provide an overview of selected techniques of program verification based on predicate abstraction. We focus on techniques that advanced the state-of-the-art in a significant way, including counterexample-guided abstraction refinement, lazy abstraction, and current trends in the form of extensions targeting, for example, data structures and multi-threading. We discuss limitations of these techniques and present our plans for addressing some of them.
Cite as

Jakub Daniel and Pavel Parízek. Predicate Abstraction in Program Verification: Survey and Current Trends. In 2014 Imperial College Computing Student Workshop. Open Access Series in Informatics (OASIcs), Volume 43, pp. 27-35, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2014)

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@InProceedings{daniel_et_al:OASIcs.ICCSW.2014.27,
  author =	{Daniel, Jakub and Par{\'\i}zek, Pavel},
  title =	{{Predicate Abstraction in Program Verification: Survey and Current Trends}},
  booktitle =	{2014 Imperial College Computing Student Workshop},
  pages =	{27--35},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-939897-76-7},
  ISSN =	{2190-6807},
  year =	{2014},
  volume =	{43},
  editor =	{Neykova, Rumyana and Ng, Nicholas},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops-dev.dagstuhl.de/entities/document/10.4230/OASIcs.ICCSW.2014.27},
  URN =		{urn:nbn:de:0030-drops-47706},
  doi =		{10.4230/OASIcs.ICCSW.2014.27},
  annote =	{Keywords: program verification, model checking, predicate abstraction, refinement}
}
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