Published in: LIPIcs, Volume 172, 20th International Workshop on Algorithms in Bioinformatics (WABI 2020)
Cong Ma, Hongyu Zheng, and Carl Kingsford. Exact Transcript Quantification Over Splice Graphs. In 20th International Workshop on Algorithms in Bioinformatics (WABI 2020). Leibniz International Proceedings in Informatics (LIPIcs), Volume 172, pp. 12:1-12:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2020)
@InProceedings{ma_et_al:LIPIcs.WABI.2020.12, author = {Ma, Cong and Zheng, Hongyu and Kingsford, Carl}, title = {{Exact Transcript Quantification Over Splice Graphs}}, booktitle = {20th International Workshop on Algorithms in Bioinformatics (WABI 2020)}, pages = {12:1--12:18}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-161-0}, ISSN = {1868-8969}, year = {2020}, volume = {172}, editor = {Kingsford, Carl and Pisanti, Nadia}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops-dev.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2020.12}, URN = {urn:nbn:de:0030-drops-128013}, doi = {10.4230/LIPIcs.WABI.2020.12}, annote = {Keywords: RNA-seq, alternative splicing, transcript quantification, splice graph, network flow} }
Published in: LIPIcs, Volume 143, 19th International Workshop on Algorithms in Bioinformatics (WABI 2019)
Natalie Sauerwald, Yihang Shen, and Carl Kingsford. Topological Data Analysis Reveals Principles of Chromosome Structure in Cellular Differentiation. In 19th International Workshop on Algorithms in Bioinformatics (WABI 2019). Leibniz International Proceedings in Informatics (LIPIcs), Volume 143, pp. 23:1-23:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2019)
@InProceedings{sauerwald_et_al:LIPIcs.WABI.2019.23, author = {Sauerwald, Natalie and Shen, Yihang and Kingsford, Carl}, title = {{Topological Data Analysis Reveals Principles of Chromosome Structure in Cellular Differentiation}}, booktitle = {19th International Workshop on Algorithms in Bioinformatics (WABI 2019)}, pages = {23:1--23:16}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-123-8}, ISSN = {1868-8969}, year = {2019}, volume = {143}, editor = {Huber, Katharina T. and Gusfield, Dan}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops-dev.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2019.23}, URN = {urn:nbn:de:0030-drops-110537}, doi = {10.4230/LIPIcs.WABI.2019.23}, annote = {Keywords: topological data analysis, chromosome structure, Hi-C, topologically associating domains} }
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