Published in: LIPIcs, Volume 276, 29th International Conference on DNA Computing and Molecular Programming (DNA 29) (2023)
Ahmed Shalaby, Chris Thachuk, and Damien Woods. Minimum Free Energy, Partition Function and Kinetics Simulation Algorithms for a Multistranded Scaffolded DNA Computer. In 29th International Conference on DNA Computing and Molecular Programming (DNA 29). Leibniz International Proceedings in Informatics (LIPIcs), Volume 276, pp. 1:1-1:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)
@InProceedings{shalaby_et_al:LIPIcs.DNA.29.1, author = {Shalaby, Ahmed and Thachuk, Chris and Woods, Damien}, title = {{Minimum Free Energy, Partition Function and Kinetics Simulation Algorithms for a Multistranded Scaffolded DNA Computer}}, booktitle = {29th International Conference on DNA Computing and Molecular Programming (DNA 29)}, pages = {1:1--1:22}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-297-6}, ISSN = {1868-8969}, year = {2023}, volume = {276}, editor = {Chen, Ho-Lin and Evans, Constantine G.}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops-dev.dagstuhl.de/entities/document/10.4230/LIPIcs.DNA.29.1}, URN = {urn:nbn:de:0030-drops-187840}, doi = {10.4230/LIPIcs.DNA.29.1}, annote = {Keywords: thermodynamic computation, model of computation, molecular computing, minimum free energy, partition function, DNA computing, DNA self-assembly, DNA strand displacement, kinetics simulation} }
Published in: LIPIcs, Volume 205, 27th International Conference on DNA Computing and Molecular Programming (DNA 27) (2021)
Matthew Cook, Tristan Stérin, and Damien Woods. Small Tile Sets That Compute While Solving Mazes. In 27th International Conference on DNA Computing and Molecular Programming (DNA 27). Leibniz International Proceedings in Informatics (LIPIcs), Volume 205, pp. 8:1-8:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2021)
@InProceedings{cook_et_al:LIPIcs.DNA.27.8, author = {Cook, Matthew and St\'{e}rin, Tristan and Woods, Damien}, title = {{Small Tile Sets That Compute While Solving Mazes}}, booktitle = {27th International Conference on DNA Computing and Molecular Programming (DNA 27)}, pages = {8:1--8:20}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-205-1}, ISSN = {1868-8969}, year = {2021}, volume = {205}, editor = {Lakin, Matthew R. and \v{S}ulc, Petr}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops-dev.dagstuhl.de/entities/document/10.4230/LIPIcs.DNA.27.8}, URN = {urn:nbn:de:0030-drops-146758}, doi = {10.4230/LIPIcs.DNA.27.8}, annote = {Keywords: model of computation, self-assembly, small universal tile set, Boolean circuits, maze-solving} }
Published in: LIPIcs, Volume 174, 26th International Conference on DNA Computing and Molecular Programming (DNA 26) (2020)
David Doty, Benjamin L Lee, and Tristan Stérin. scadnano: A Browser-Based, Scriptable Tool for Designing DNA Nanostructures. In 26th International Conference on DNA Computing and Molecular Programming (DNA 26). Leibniz International Proceedings in Informatics (LIPIcs), Volume 174, pp. 9:1-9:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2020)
@InProceedings{doty_et_al:LIPIcs.DNA.2020.9, author = {Doty, David and Lee, Benjamin L and St\'{e}rin, Tristan}, title = {{scadnano: A Browser-Based, Scriptable Tool for Designing DNA Nanostructures}}, booktitle = {26th International Conference on DNA Computing and Molecular Programming (DNA 26)}, pages = {9:1--9:17}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-163-4}, ISSN = {1868-8969}, year = {2020}, volume = {174}, editor = {Geary, Cody and Patitz, Matthew J.}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops-dev.dagstuhl.de/entities/document/10.4230/LIPIcs.DNA.2020.9}, URN = {urn:nbn:de:0030-drops-129624}, doi = {10.4230/LIPIcs.DNA.2020.9}, annote = {Keywords: computer-aided design, structural DNA nanotechnology, DNA origami} }
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