Peter Heringer, Daniel Doerr. sqz (Software, Source Code). Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)
@misc{dagstuhl-artifact-24320,
title = {{sqz}},
author = {Heringer, Peter and Doerr, Daniel},
note = {Software, swhId: \href{https://archive.softwareheritage.org/swh:1:dir:d7c4cb1cc536abc10166918dda34b0b373987c7b}{\texttt{swh:1:dir:d7c4cb1cc536abc10166918dda34b0b373987c7b}} (visited on 2025-08-15)},
url = {https://github.com/codialab/sqz},
doi = {10.4230/artifacts.24320},
}
Published in: LIPIcs, Volume 344, 25th International Conference on Algorithms for Bioinformatics (WABI 2025)
Peter Heringer and Daniel Doerr. Human Readable Compression of GFA Paths Using Grammar-Based Code. In 25th International Conference on Algorithms for Bioinformatics (WABI 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 344, pp. 14:1-14:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)
@InProceedings{heringer_et_al:LIPIcs.WABI.2025.14,
author = {Heringer, Peter and Doerr, Daniel},
title = {{Human Readable Compression of GFA Paths Using Grammar-Based Code}},
booktitle = {25th International Conference on Algorithms for Bioinformatics (WABI 2025)},
pages = {14:1--14:19},
series = {Leibniz International Proceedings in Informatics (LIPIcs)},
ISBN = {978-3-95977-386-7},
ISSN = {1868-8969},
year = {2025},
volume = {344},
editor = {Brejov\'{a}, Bro\v{n}a and Patro, Rob},
publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
address = {Dagstuhl, Germany},
URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2025.14},
URN = {urn:nbn:de:0030-drops-239395},
doi = {10.4230/LIPIcs.WABI.2025.14},
annote = {Keywords: pangenomics, pangenome graphs, compression, grammar-based code, byte pair encoding}
}