33 Search Results for "Goldberg, Paul"

Document
DOI: 10.4230/OASIcs.ATMOS.2024.1
Landmark Hub Labeling: Improved Bounds and Faster Query Answering

Authors: Justine Cauvi, Ruoying Li, and Sabine Storandt

Published in: OASIcs, Volume 123, 24th Symposium on Algorithmic Approaches for Transportation Modelling, Optimization, and Systems (ATMOS 2024)

Abstract
Hub Labeling (HL) is a state-of-the-art method for answering shortest-distance queries between node pairs in weighted graphs. It provides very fast query times but also requires considerable additional space to store the label information. Recently, a generalization of HL, called Landmark Hub Labeling (LHL), has been proposed, that conceptionally allows a storage of fewer label information without compromising the optimality of the query result. However, query answering with LHL was shown to be slower than with HL, both in theory and practice. Furthermore, it was not clear whether there are graphs with a substantial space reduction when using LHL instead of HL. In this paper, we describe a new way of storing label information of an LHL such that query times are significantly reduced and then asymptotically match those of HL. Thus, we alleviate the so far greatest shortcoming of LHL compared to HL. Moreover, we show that for the practically relevant hierarchical versions (HHL and HLHL), there are graphs in which the label size of an optimal HLHL is a factor of Θ(√ n) smaller than that of an optimal HHL. We establish further novel bounds between different labeling variants. Additionally, we provide a comparative experimental study between approximation algorithms for HL and LHL. We demonstrate that label sizes in an LHL are consistently smaller than those of HL across diverse benchmark graphs, including road networks.
Cite as

Justine Cauvi, Ruoying Li, and Sabine Storandt. Landmark Hub Labeling: Improved Bounds and Faster Query Answering. In 24th Symposium on Algorithmic Approaches for Transportation Modelling, Optimization, and Systems (ATMOS 2024). Open Access Series in Informatics (OASIcs), Volume 123, pp. 1:1-1:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{cauvi_et_al:OASIcs.ATMOS.2024.1,
  author =	{Cauvi, Justine and Li, Ruoying and Storandt, Sabine},
  title =	{{Landmark Hub Labeling: Improved Bounds and Faster Query Answering}},
  booktitle =	{24th Symposium on Algorithmic Approaches for Transportation Modelling, Optimization, and Systems (ATMOS 2024)},
  pages =	{1:1--1:17},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-350-8},
  ISSN =	{2190-6807},
  year =	{2024},
  volume =	{123},
  editor =	{Bouman, Paul C. and Kontogiannis, Spyros C.},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.ATMOS.2024.1},
  URN =		{urn:nbn:de:0030-drops-211892},
  doi =		{10.4230/OASIcs.ATMOS.2024.1},
  annote =	{Keywords: Route Planning, Shortest Path, Hub Labeling}
}
Document
DOI: 10.4230/OASIcs.ATMOS.2024.2
Indexing Graphs for Shortest Beer Path Queries

Authors: David Coudert, Andrea D'Ascenzo, and Mattia D'Emidio

Published in: OASIcs, Volume 123, 24th Symposium on Algorithmic Approaches for Transportation Modelling, Optimization, and Systems (ATMOS 2024)

Abstract
A beer graph is an edge-weighted graph G = (V,E,ω) with beer vertices B ⊆ V. A beer path between two vertices s and t of a beer graph is a path that connects s and t and visits at least one vertex in B. The beer distance between two vertices is the weight of a shortest beer path, i.e. a beer path having minimum total weight. A graph indexing scheme is a two-phase method that constructs an index data structure by a one-time preprocessing of an input graph and then exploits it to compute (or accelerate the computation of) answers to queries on structures of the graph dataset. In the last decade, such indexing schemes have been designed to perform, effectively, many relevant types of queries, e.g. on reachability, and have gained significant popularity in essentially all data-intensive application domains where large number of queries have to be routinely answered (e.g. journey planners), since they have been shown, through many experimental studies, to offer extremely low query times at the price of limited preprocessing time and space overheads. In this paper, we showcase that an indexing scheme, to efficiently execute queries on beer distances or shortest beer paths for pairs of vertices of a beer graph, can be obtained by adapting the highway labeling, a recently introduced indexing method to accelerate the computation of classical shortest paths. We design a preprocessing algorithm to build a whl index, i.e. a weighted highway labeling of a beer graph, and show how it can be queried to compute beer distances and shortest beer paths. Through extensive experimentation on real networks, we empirically demonstrate its practical effectiveness and superiority, in terms of offered trade-off between preprocessing time, space overhead and query time, with respect to the state-of-the-art.
Cite as

David Coudert, Andrea D'Ascenzo, and Mattia D'Emidio. Indexing Graphs for Shortest Beer Path Queries. In 24th Symposium on Algorithmic Approaches for Transportation Modelling, Optimization, and Systems (ATMOS 2024). Open Access Series in Informatics (OASIcs), Volume 123, pp. 2:1-2:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{coudert_et_al:OASIcs.ATMOS.2024.2,
  author =	{Coudert, David and D'Ascenzo, Andrea and D'Emidio, Mattia},
  title =	{{Indexing Graphs for Shortest Beer Path Queries}},
  booktitle =	{24th Symposium on Algorithmic Approaches for Transportation Modelling, Optimization, and Systems (ATMOS 2024)},
  pages =	{2:1--2:18},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-350-8},
  ISSN =	{2190-6807},
  year =	{2024},
  volume =	{123},
  editor =	{Bouman, Paul C. and Kontogiannis, Spyros C.},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.ATMOS.2024.2},
  URN =		{urn:nbn:de:0030-drops-211907},
  doi =		{10.4230/OASIcs.ATMOS.2024.2},
  annote =	{Keywords: Graph Algorithms, Indexing Schemes, Beer Distances, Algorithms Engineering}
}
Document
DOI: 10.4230/LIPIcs.AFT.2024.12
Payment Censorship in the Lightning Network Despite Encrypted Communication

Authors: Charmaine Ndolo and Florian Tschorsch

Published in: LIPIcs, Volume 316, 6th Conference on Advances in Financial Technologies (AFT 2024)

Abstract
The Lightning network (LN) offers a solution to Bitcoin’s scalability limitations by providing fast and private off-chain payments. In addition to the LN’s long known application-level centralisation, recent work has highlighted its centralisation at the network-level which makes it vulnerable to attacks on privacy by malicious actors. In this work, we explore the LN’s susceptibility to censorship by a network-level actor such as a malicious autonomous system. We show that a network-level actor can identify and censor all payments routed via their network by just examining the packet headers. Our results indicate that it is viable to accurately identify LN messages despite the fact that all inter-peer communication is end-to-end encrypted. Additionally, we describe how a network-level observer can determine a node’s role in a payment path based on timing, direction of flow and message type, and demonstrate the approach’s feasibility using experiments in a live instance of the network. Simulations of the attack on a snapshot of the Lightning mainnet suggest that the impact of the attack varies from mild to potentially dramatic depending on the adversary and type of payments that are censored. We analyse countermeasures the network can implement and come to the conclusion that an adequate solution comprises constant message sizes as well as dummy traffic.
Cite as

Charmaine Ndolo and Florian Tschorsch. Payment Censorship in the Lightning Network Despite Encrypted Communication. In 6th Conference on Advances in Financial Technologies (AFT 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 316, pp. 12:1-12:24, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{ndolo_et_al:LIPIcs.AFT.2024.12,
  author =	{Ndolo, Charmaine and Tschorsch, Florian},
  title =	{{Payment Censorship in the Lightning Network Despite Encrypted Communication}},
  booktitle =	{6th Conference on Advances in Financial Technologies (AFT 2024)},
  pages =	{12:1--12:24},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-345-4},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{316},
  editor =	{B\"{o}hme, Rainer and Kiffer, Lucianna},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.AFT.2024.12},
  URN =		{urn:nbn:de:0030-drops-209484},
  doi =		{10.4230/LIPIcs.AFT.2024.12},
  annote =	{Keywords: Lightning network, payment channel networks, censorship resistance}
}
Document
DOI: 10.4230/LIPIcs.COSIT.2024.1
Wayfinding Stages: The Role of Familiarity, Gaze Events, and Visual Attention

Authors: Negar Alinaghi and Ioannis Giannopoulos

Published in: LIPIcs, Volume 315, 16th International Conference on Spatial Information Theory (COSIT 2024)

Abstract
Understanding the cognitive processes involved in wayfinding is crucial for both theoretical advances and practical applications in navigation systems development. This study explores how gaze behavior and visual attention contribute to our understanding of cognitive states during wayfinding. Based on the model proposed by Downs and Stea, which segments wayfinding into four distinct stages: self-localization, route planning, monitoring, and goal recognition, we conducted an outdoor wayfinding experiment with 56 participants. Given the significant role of spatial familiarity in wayfinding behavior, each participant navigated six different routes in both familiar and unfamiliar environments, with their eye movements being recorded. We provide a detailed examination of participants' gaze behavior and the actual objects of focus. Our findings reveal distinct gaze behavior patterns and visual attention, differentiating wayfinding stages while emphasizing the impact of spatial familiarity. This examination of visual engagement during wayfinding explains adaptive cognitive processes, demonstrating how familiarity influences navigation strategies. The results enhance our theoretical understanding of wayfinding and offer practical insights for developing navigation aids capable of predicting different wayfinding stages.
Cite as

Negar Alinaghi and Ioannis Giannopoulos. Wayfinding Stages: The Role of Familiarity, Gaze Events, and Visual Attention. In 16th International Conference on Spatial Information Theory (COSIT 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 315, pp. 1:1-1:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{alinaghi_et_al:LIPIcs.COSIT.2024.1,
  author =	{Alinaghi, Negar and Giannopoulos, Ioannis},
  title =	{{Wayfinding Stages: The Role of Familiarity, Gaze Events, and Visual Attention}},
  booktitle =	{16th International Conference on Spatial Information Theory (COSIT 2024)},
  pages =	{1:1--1:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-330-0},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{315},
  editor =	{Adams, Benjamin and Griffin, Amy L. and Scheider, Simon and McKenzie, Grant},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.COSIT.2024.1},
  URN =		{urn:nbn:de:0030-drops-208161},
  doi =		{10.4230/LIPIcs.COSIT.2024.1},
  annote =	{Keywords: Eye-tracking, Wayfinding, Spatial Familiarity, Visual Attention, Gaze Behavior}
}
Document
DOI: 10.4230/LIPIcs.CP.2024.4
Certifying Without Loss of Generality Reasoning in Solution-Improving Maximum Satisfiability

Authors: Jeremias Berg, Bart Bogaerts, Jakob Nordström, Andy Oertel, Tobias Paxian, and Dieter Vandesande

Published in: LIPIcs, Volume 307, 30th International Conference on Principles and Practice of Constraint Programming (CP 2024)

Abstract
Proof logging has long been the established method to certify correctness of Boolean satisfiability (SAT) solvers, but has only recently been introduced for SAT-based optimization (MaxSAT). The focus of this paper is solution-improving search (SIS), in which a SAT solver is iteratively queried for increasingly better solutions until an optimal one is found. A challenging aspect of modern SIS solvers is that they make use of complex "without loss of generality" arguments that are quite involved to understand even at a human meta-level, let alone to express in a simple, machine-verifiable proof. In this work, we develop pseudo-Boolean proof logging methods for solution-improving MaxSAT solving, and use them to produce a certifying version of the state-of-the-art solver Pacose with VeriPB proofs. Our experimental evaluation demonstrates that this approach works in practice. We hope that this is yet another step towards general adoption of proof logging in MaxSAT solving.
Cite as

Jeremias Berg, Bart Bogaerts, Jakob Nordström, Andy Oertel, Tobias Paxian, and Dieter Vandesande. Certifying Without Loss of Generality Reasoning in Solution-Improving Maximum Satisfiability. In 30th International Conference on Principles and Practice of Constraint Programming (CP 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 307, pp. 4:1-4:28, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{berg_et_al:LIPIcs.CP.2024.4,
  author =	{Berg, Jeremias and Bogaerts, Bart and Nordstr\"{o}m, Jakob and Oertel, Andy and Paxian, Tobias and Vandesande, Dieter},
  title =	{{Certifying Without Loss of Generality Reasoning in Solution-Improving Maximum Satisfiability}},
  booktitle =	{30th International Conference on Principles and Practice of Constraint Programming (CP 2024)},
  pages =	{4:1--4:28},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-336-2},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{307},
  editor =	{Shaw, Paul},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CP.2024.4},
  URN =		{urn:nbn:de:0030-drops-206895},
  doi =		{10.4230/LIPIcs.CP.2024.4},
  annote =	{Keywords: proof logging, certifying algorithms, MaxSAT, solution-improving search, SAT-UNSAT, maximum satisfiability, combinatorial optimization, certification, pseudo-Boolean}
}
Document
DOI: 10.4230/LIPIcs.CP.2024.11
A Multi-Stage Proof Logging Framework to Certify the Correctness of CP Solvers

Authors: Maarten Flippo, Konstantin Sidorov, Imko Marijnissen, Jeff Smits, and Emir Demirović

Published in: LIPIcs, Volume 307, 30th International Conference on Principles and Practice of Constraint Programming (CP 2024)

Abstract
Proof logging is used to increase trust in the optimality and unsatisfiability claims of solvers. However, to this date, no constraint programming solver can practically produce proofs without significantly impacting performance, which hinders mainstream adoption. We address this issue by introducing a novel proof generation framework, together with a CP proof format and proof checker. Our approach is to divide the proof generation into three steps. At runtime, we require the CP solver to only produce a proof sketch, which we call a scaffold. After the solving is done, our proof processor trims and expands the scaffold into a full CP proof, which is subsequently verified. Our framework is agnostic to the solver and the verification approach. Through MiniZinc benchmarks, we demonstrate that with our framework, the overhead of logging during solving is often less than 10%, significantly lower than other approaches, and that our proof processing step can reduce the overall size of the proof by orders of magnitude and by extension the proof checking time. Our results demonstrate that proof logging has the potential to become an integral part of the CP community.
Cite as

Maarten Flippo, Konstantin Sidorov, Imko Marijnissen, Jeff Smits, and Emir Demirović. A Multi-Stage Proof Logging Framework to Certify the Correctness of CP Solvers. In 30th International Conference on Principles and Practice of Constraint Programming (CP 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 307, pp. 11:1-11:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{flippo_et_al:LIPIcs.CP.2024.11,
  author =	{Flippo, Maarten and Sidorov, Konstantin and Marijnissen, Imko and Smits, Jeff and Demirovi\'{c}, Emir},
  title =	{{A Multi-Stage Proof Logging Framework to Certify the Correctness of CP Solvers}},
  booktitle =	{30th International Conference on Principles and Practice of Constraint Programming (CP 2024)},
  pages =	{11:1--11:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-336-2},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{307},
  editor =	{Shaw, Paul},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CP.2024.11},
  URN =		{urn:nbn:de:0030-drops-206969},
  doi =		{10.4230/LIPIcs.CP.2024.11},
  annote =	{Keywords: proof logging, formal verification, constraint programming}
}
Document
DOI: 10.4230/LIPIcs.CP.2024.20
Constraint Modelling with LLMs Using In-Context Learning

Authors: Kostis Michailidis, Dimos Tsouros, and Tias Guns

Published in: LIPIcs, Volume 307, 30th International Conference on Principles and Practice of Constraint Programming (CP 2024)

Abstract
Constraint Programming (CP) allows for the modelling and solving of a wide range of combinatorial problems. However, modelling such problems using constraints over decision variables still requires significant expertise, both in conceptual thinking and syntactic use of modelling languages. In this work, we explore the potential of using pre-trained Large Language Models (LLMs) as coding assistants, to transform textual problem descriptions into concrete and executable CP specifications. We present different transformation pipelines with explicit intermediate representations, and we investigate the potential benefit of various retrieval-augmented example selection strategies for in-context learning. We evaluate our approach on 2 datasets from the literature, namely NL4Opt (optimisation) and Logic Grid Puzzles (satisfaction), and a heterogeneous set of exercises from a CP course. The results show that pre-trained LLMs have promising potential for initialising the modelling process, with retrieval-augmented in-context learning significantly enhancing their modelling capabilities.
Cite as

Kostis Michailidis, Dimos Tsouros, and Tias Guns. Constraint Modelling with LLMs Using In-Context Learning. In 30th International Conference on Principles and Practice of Constraint Programming (CP 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 307, pp. 20:1-20:27, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{michailidis_et_al:LIPIcs.CP.2024.20,
  author =	{Michailidis, Kostis and Tsouros, Dimos and Guns, Tias},
  title =	{{Constraint Modelling with LLMs Using In-Context Learning}},
  booktitle =	{30th International Conference on Principles and Practice of Constraint Programming (CP 2024)},
  pages =	{20:1--20:27},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-336-2},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{307},
  editor =	{Shaw, Paul},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CP.2024.20},
  URN =		{urn:nbn:de:0030-drops-207053},
  doi =		{10.4230/LIPIcs.CP.2024.20},
  annote =	{Keywords: Constraint Modelling, Constraint Acquisition, Constraint Programming, Large Language Models, In-Context Learning, Natural Language Processing, Named Entity Recognition, Retrieval-Augmented Generation, Optimisation}
}
Document
DOI: 10.4230/LIPIcs.CP.2024.27
Efficient Implementation of the Global Cardinality Constraint with Costs

Authors: Margaux Schmied and Jean-Charles Régin

Published in: LIPIcs, Volume 307, 30th International Conference on Principles and Practice of Constraint Programming (CP 2024)

Abstract
The success of Constraint Programming relies partly on the global constraints and implementation of the associated filtering algorithms. Recently, new ideas emerged to improve these implementations in practice, especially regarding the all different constraint. In this paper, we consider the cardinality constraint with costs. The cardinality constraint is a generalization of the all different constraint that specifies the number of times each value must be taken by a given set of variables in a solution. The version with costs introduces an assignment cost and bounds the total sum of assignment costs. The arc consistency filtering algorithm of this constraint is difficult to use in practice, as it systematically searches for many shortest paths. We propose a new approach that works with upper bounds on shortest paths based on landmarks. This approach can be seen as a preprocessing. It is fast and avoids, in practice, a large number of explicit computations of shortest paths.
Cite as

Margaux Schmied and Jean-Charles Régin. Efficient Implementation of the Global Cardinality Constraint with Costs. In 30th International Conference on Principles and Practice of Constraint Programming (CP 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 307, pp. 27:1-27:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{schmied_et_al:LIPIcs.CP.2024.27,
  author =	{Schmied, Margaux and R\'{e}gin, Jean-Charles},
  title =	{{Efficient Implementation of the Global Cardinality Constraint with Costs}},
  booktitle =	{30th International Conference on Principles and Practice of Constraint Programming (CP 2024)},
  pages =	{27:1--27:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-336-2},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{307},
  editor =	{Shaw, Paul},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CP.2024.27},
  URN =		{urn:nbn:de:0030-drops-207126},
  doi =		{10.4230/LIPIcs.CP.2024.27},
  annote =	{Keywords: global constraint, filtering algorithm, cardinality constraints with costs, arc consistency}
}
Document
DOI: 10.4230/LIPIcs.WABI.2024.5
Memoization on Shared Subtrees Accelerates Computations on Genealogical Forests

Authors: Lukas Hübner and Alexandros Stamatakis

Published in: LIPIcs, Volume 312, 24th International Workshop on Algorithms in Bioinformatics (WABI 2024)

Abstract
The field of population genetics attempts to advance our understanding of evolutionary processes. It has applications, for example, in medical research, wildlife conservation, and - in conjunction with recent advances in ancient DNA sequencing technology - studying human migration patterns over the past few thousand years. The basic toolbox of population genetics includes genealogical trees, which describe the shared evolutionary history among individuals of the same species. They are calculated on the basis of genetic variations. However, in recombining organisms, a single tree is insufficient to describe the evolutionary history of the whole genome. Instead, a collection of correlated trees can be used, where each describes the evolutionary history of a consecutive region of the genome. The current corresponding state of-the-art data structure, tree sequences, compresses these genealogical trees via edit operations when moving from one tree to the next along the genome instead of storing the full, often redundant, description for each tree. We propose a new data structure, genealogical forests, which compresses the set of genealogical trees into a DAG. In this DAG identical subtrees that are shared across the input trees are encoded only once, thereby allowing for straight-forward memoization of intermediate results. Additionally, we provide a C++ implementation of our proposed data structure, called gfkit, which is 2.1 to 11.2 (median 4.0) times faster than the state-of-the-art tool on empirical and simulated datasets at computing important population genetics statistics such as the Allele Frequency Spectrum, Patterson’s f, the Fixation Index, Tajima’s D, pairwise Lowest Common Ancestors, and others. On Lowest Common Ancestor queries with more than two samples as input, gfkit scales asymptotically better than the state-of-the-art, and is thus up to 990 times faster. In conclusion, our proposed data structure compresses genealogical trees by storing shared subtrees only once, thereby enabling straight-forward memoization of intermediate results, yielding a substantial runtime reduction and a potentially more intuitive data representation over the state-of-the-art. Our improvements will boost the development of novel analyses and models in the field of population genetics and increases scalability to ever-growing genomic datasets.
Cite as

Lukas Hübner and Alexandros Stamatakis. Memoization on Shared Subtrees Accelerates Computations on Genealogical Forests. In 24th International Workshop on Algorithms in Bioinformatics (WABI 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 312, pp. 5:1-5:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{hubner_et_al:LIPIcs.WABI.2024.5,
  author =	{H\"{u}bner, Lukas and Stamatakis, Alexandros},
  title =	{{Memoization on Shared Subtrees Accelerates Computations on Genealogical Forests}},
  booktitle =	{24th International Workshop on Algorithms in Bioinformatics (WABI 2024)},
  pages =	{5:1--5:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-340-9},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{312},
  editor =	{Pissis, Solon P. and Sung, Wing-Kin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2024.5},
  URN =		{urn:nbn:de:0030-drops-206499},
  doi =		{10.4230/LIPIcs.WABI.2024.5},
  annote =	{Keywords: bioinformatics, population genetics, algorithms}
}
Document
DOI: 10.4230/LIPIcs.MFCS.2024.46
Query Maintenance Under Batch Changes with Small-Depth Circuits

Authors: Samir Datta, Asif Khan, Anish Mukherjee, Felix Tschirbs, Nils Vortmeier, and Thomas Zeume

Published in: LIPIcs, Volume 306, 49th International Symposium on Mathematical Foundations of Computer Science (MFCS 2024)

Abstract
Which dynamic queries can be maintained efficiently? For constant-size changes, it is known that constant-depth circuits or, equivalently, first-order updates suffice for maintaining many important queries, among them reachability, tree isomorphism, and the word problem for context-free languages. In other words, these queries are in the dynamic complexity class DynFO. We show that most of the existing results for constant-size changes can be recovered for batch changes of polylogarithmic size if one allows circuits of depth 𝒪(log log n) or, equivalently, first-order updates that are iterated 𝒪(log log n) times.
Cite as

Samir Datta, Asif Khan, Anish Mukherjee, Felix Tschirbs, Nils Vortmeier, and Thomas Zeume. Query Maintenance Under Batch Changes with Small-Depth Circuits. In 49th International Symposium on Mathematical Foundations of Computer Science (MFCS 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 306, pp. 46:1-46:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{datta_et_al:LIPIcs.MFCS.2024.46,
  author =	{Datta, Samir and Khan, Asif and Mukherjee, Anish and Tschirbs, Felix and Vortmeier, Nils and Zeume, Thomas},
  title =	{{Query Maintenance Under Batch Changes with Small-Depth Circuits}},
  booktitle =	{49th International Symposium on Mathematical Foundations of Computer Science (MFCS 2024)},
  pages =	{46:1--46:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-335-5},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{306},
  editor =	{Kr\'{a}lovi\v{c}, Rastislav and Ku\v{c}era, Anton{\'\i}n},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.MFCS.2024.46},
  URN =		{urn:nbn:de:0030-drops-206027},
  doi =		{10.4230/LIPIcs.MFCS.2024.46},
  annote =	{Keywords: Dynamic complexity theory, parallel computation, dynamic algorithms}
}
Document
DOI: 10.4230/LIPIcs.MFCS.2024.50
An Oracle with no UP-Complete Sets, but NP = PSPACE

Authors: David Dingel, Fabian Egidy, and Christian Glaßer

Published in: LIPIcs, Volume 306, 49th International Symposium on Mathematical Foundations of Computer Science (MFCS 2024)

Abstract
We construct an oracle relative to which NP = PSPACE, but UP has no many-one complete sets. This combines the properties of an oracle by Hartmanis and Hemachandra [J. Hartmanis and L. A. Hemachandra, 1988] and one by Ogiwara and Hemachandra [Ogiwara and Hemachandra, 1991]. The oracle provides new separations of classical conjectures on optimal proof systems and complete sets in promise classes. This answers several questions by Pudlák [P. Pudlák, 2017], e.g., the implications UP ⟹ CON^𝖭 and SAT ⟹ TFNP are false relative to our oracle. Moreover, the oracle demonstrates that, in principle, it is possible that TFNP-complete problems exist, while at the same time SAT has no p-optimal proof systems.
Cite as

David Dingel, Fabian Egidy, and Christian Glaßer. An Oracle with no UP-Complete Sets, but NP = PSPACE. In 49th International Symposium on Mathematical Foundations of Computer Science (MFCS 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 306, pp. 50:1-50:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{dingel_et_al:LIPIcs.MFCS.2024.50,
  author =	{Dingel, David and Egidy, Fabian and Gla{\ss}er, Christian},
  title =	{{An Oracle with no UP-Complete Sets, but NP = PSPACE}},
  booktitle =	{49th International Symposium on Mathematical Foundations of Computer Science (MFCS 2024)},
  pages =	{50:1--50:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-335-5},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{306},
  editor =	{Kr\'{a}lovi\v{c}, Rastislav and Ku\v{c}era, Anton{\'\i}n},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.MFCS.2024.50},
  URN =		{urn:nbn:de:0030-drops-206063},
  doi =		{10.4230/LIPIcs.MFCS.2024.50},
  annote =	{Keywords: Computational Complexity, Promise Classes, Complete Sets, Oracle Construction}
}
Document
DOI: 10.4230/LIPIcs.MFCS.2024.52
Structural Parameters for Dense Temporal Graphs

Authors: Jessica Enright, Samuel D. Hand, Laura Larios-Jones, and Kitty Meeks

Published in: LIPIcs, Volume 306, 49th International Symposium on Mathematical Foundations of Computer Science (MFCS 2024)

Abstract
Temporal graphs provide a useful model for many real-world networks. Unfortunately, the majority of algorithmic problems we might consider on such graphs are intractable. There has been recent progress in defining structural parameters which describe tractable cases by simultaneously restricting the underlying structure and the times at which edges appear in the graph. These all rely on the temporal graph being sparse in some sense. We introduce temporal analogues of three increasingly restrictive static graph parameters - cliquewidth, modular-width and neighbourhood diversity - which take small values for highly structured temporal graphs, even if a large number of edges are active at each timestep. The computational problems solvable efficiently when the temporal cliquewidth of the input graph is bounded form a subset of those solvable efficiently when the temporal modular-width is bounded, which is in turn a subset of problems efficiently solvable when the temporal neighbourhood diversity is bounded. By considering specific temporal graph problems, we demonstrate that (up to standard complexity theoretic assumptions) these inclusions are strict.
Cite as

Jessica Enright, Samuel D. Hand, Laura Larios-Jones, and Kitty Meeks. Structural Parameters for Dense Temporal Graphs. In 49th International Symposium on Mathematical Foundations of Computer Science (MFCS 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 306, pp. 52:1-52:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{enright_et_al:LIPIcs.MFCS.2024.52,
  author =	{Enright, Jessica and Hand, Samuel D. and Larios-Jones, Laura and Meeks, Kitty},
  title =	{{Structural Parameters for Dense Temporal Graphs}},
  booktitle =	{49th International Symposium on Mathematical Foundations of Computer Science (MFCS 2024)},
  pages =	{52:1--52:15},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-335-5},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{306},
  editor =	{Kr\'{a}lovi\v{c}, Rastislav and Ku\v{c}era, Anton{\'\i}n},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.MFCS.2024.52},
  URN =		{urn:nbn:de:0030-drops-206082},
  doi =		{10.4230/LIPIcs.MFCS.2024.52},
  annote =	{Keywords: Graph algorithms, Parameterized Algorithms, Temporal Graphs}
}
Document
DOI: 10.4230/LIPIcs.SAT.2024.5
The Relative Strength of #SAT Proof Systems

Authors: Olaf Beyersdorff, Johannes K. Fichte, Markus Hecher, Tim Hoffmann, and Kaspar Kasche

Published in: LIPIcs, Volume 305, 27th International Conference on Theory and Applications of Satisfiability Testing (SAT 2024)

Abstract
The propositional model counting problem #SAT asks to compute the number of satisfying assignments for a given propositional formula. Recently, three #SAT proof systems kcps (knowledge compilation proof system), MICE (model counting induction by claim extension), and CPOG (certified partitioned-operation graphs) have been introduced with the aim to model #SAT solving and enable proof logging for solvers. Prior to this paper, the relations between these proof systems have been unclear and very few proof complexity results are known. We completely determine the simulation order of the three systems, establishing that CPOG simulates both MICE and kcps, while MICE and kcps are exponentially incomparable. This implies that CPOG is strictly stronger than the other two systems.
Cite as

Olaf Beyersdorff, Johannes K. Fichte, Markus Hecher, Tim Hoffmann, and Kaspar Kasche. The Relative Strength of #SAT Proof Systems. In 27th International Conference on Theory and Applications of Satisfiability Testing (SAT 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 305, pp. 5:1-5:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{beyersdorff_et_al:LIPIcs.SAT.2024.5,
  author =	{Beyersdorff, Olaf and Fichte, Johannes K. and Hecher, Markus and Hoffmann, Tim and Kasche, Kaspar},
  title =	{{The Relative Strength of #SAT Proof Systems}},
  booktitle =	{27th International Conference on Theory and Applications of Satisfiability Testing (SAT 2024)},
  pages =	{5:1--5:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-334-8},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{305},
  editor =	{Chakraborty, Supratik and Jiang, Jie-Hong Roland},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SAT.2024.5},
  URN =		{urn:nbn:de:0030-drops-205276},
  doi =		{10.4230/LIPIcs.SAT.2024.5},
  annote =	{Keywords: Model Counting, #SAT, Proof Complexity, Proof Systems, Lower Bounds, Knowledge Compilation}
}
Document
DOI: 10.4230/LIPIcs.ITC.2024.6
Information-Theoretic Single-Server PIR in the Shuffle Model

Authors: Yuval Ishai, Mahimna Kelkar, Daniel Lee, and Yiping Ma

Published in: LIPIcs, Volume 304, 5th Conference on Information-Theoretic Cryptography (ITC 2024)

Abstract
We revisit the problem of private information retrieval (PIR) in the shuffle model, where queries can be made anonymously by multiple clients. We present the first single-server PIR protocol in this model that has sublinear per-client communication and information-theoretic security. Moreover, following one-time preprocessing on the server side, our protocol only requires sublinear per-client computation. Concretely, for every γ > 0, the protocol has O(n^{γ}) communication and computation costs per (stateless) client, with 1/poly(n) statistical security, assuming that a size-n database is simultaneously accessed by poly(n) clients. This should be contrasted with the recent breakthrough result of Lin, Mook, and Wichs (STOC 2023) on doubly efficient PIR in the standard model, which is (inherently) limited to computational security.
Cite as

Yuval Ishai, Mahimna Kelkar, Daniel Lee, and Yiping Ma. Information-Theoretic Single-Server PIR in the Shuffle Model. In 5th Conference on Information-Theoretic Cryptography (ITC 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 304, pp. 6:1-6:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{ishai_et_al:LIPIcs.ITC.2024.6,
  author =	{Ishai, Yuval and Kelkar, Mahimna and Lee, Daniel and Ma, Yiping},
  title =	{{Information-Theoretic Single-Server PIR in the Shuffle Model}},
  booktitle =	{5th Conference on Information-Theoretic Cryptography (ITC 2024)},
  pages =	{6:1--6:23},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-333-1},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{304},
  editor =	{Aggarwal, Divesh},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITC.2024.6},
  URN =		{urn:nbn:de:0030-drops-205142},
  doi =		{10.4230/LIPIcs.ITC.2024.6},
  annote =	{Keywords: Private information retrieval, Shuffle model}
}
Document
DOI: 10.4230/LIPIcs.AofA.2024.22
The Recurrence/Transience of Random Walks on a Bounded Grid in an Increasing Dimension

Authors: Shuma Kumamoto, Shuji Kijima, and Tomoyuki Shirai

Published in: LIPIcs, Volume 302, 35th International Conference on Probabilistic, Combinatorial and Asymptotic Methods for the Analysis of Algorithms (AofA 2024)

Abstract
It is celebrated that a simple random walk on ℤ and ℤ² returns to the initial vertex v infinitely many times during infinitely many transitions, which is said recurrent, while it returns to v only finite times on ℤ^d for d ≥ 3, which is said transient. It is also known that a simple random walk on a growing region on ℤ^d can be recurrent depending on growing speed for any fixed d. This paper shows that a simple random walk on {0,1,…,N}ⁿ with an increasing n and a fixed N can be recurrent depending on the increasing speed of n. Precisely, we are concerned with a specific model of a random walk on a growing graph (RWoGG) and show a phase transition between the recurrence and transience of the random walk regarding the growth speed of the graph. For the proof, we develop a pausing coupling argument introducing the notion of weakly less homesick as graph growing (weakly LHaGG).
Cite as

Shuma Kumamoto, Shuji Kijima, and Tomoyuki Shirai. The Recurrence/Transience of Random Walks on a Bounded Grid in an Increasing Dimension. In 35th International Conference on Probabilistic, Combinatorial and Asymptotic Methods for the Analysis of Algorithms (AofA 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 302, pp. 22:1-22:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{kumamoto_et_al:LIPIcs.AofA.2024.22,
  author =	{Kumamoto, Shuma and Kijima, Shuji and Shirai, Tomoyuki},
  title =	{{The Recurrence/Transience of Random Walks on a Bounded Grid in an Increasing Dimension}},
  booktitle =	{35th International Conference on Probabilistic, Combinatorial and Asymptotic Methods for the Analysis of Algorithms (AofA 2024)},
  pages =	{22:1--22:15},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-329-4},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{302},
  editor =	{Mailler, C\'{e}cile and Wild, Sebastian},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.AofA.2024.22},
  URN =		{urn:nbn:de:0030-drops-204577},
  doi =		{10.4230/LIPIcs.AofA.2024.22},
  annote =	{Keywords: Random walk, dynamic graph, recurrence, transience, coupling}
}
  • Refine by Author
  • 5 Goldberg, Paul W.
  • 2 Meeks, Kitty
  • 1 Acharya, Pritam
  • 1 Alinaghi, Negar
  • 1 Berg, Jeremias
  • Show More...

  • Refine by Classification
  • 5 Theory of computation → Problems, reductions and completeness
  • 4 Theory of computation → Graph algorithms analysis
  • 3 Theory of computation → Constraint and logic programming
  • 2 Mathematics of computing → Combinatorial optimization
  • 2 Mathematics of computing → Graph algorithms
  • Show More...

  • Refine by Keyword
  • 4 TFNP
  • 3 Computational Complexity
  • 3 PPAD
  • 2 PPA
  • 2 consensus halving
  • Show More...

  • Refine by Type
  • 33 document

  • Refine by Publication Year
  • 24 2024
  • 3 2019
  • 2 2018
  • 1 2015
  • 1 2017
  • Show More...

Questions / Remarks / Feedback
X

Feedback for Dagstuhl Publishing


Thanks for your feedback!

Feedback submitted

Could not send message

Please try again later or send an E-mail
© 2023-2024 Schloss Dagstuhl – LZI GmbH Imprint Privacy Contact