4 Search Results for "Goodrich, Timothy D."

Document
DOI: 10.4230/LIPIcs.SEA.2023.10
Solving Directed Feedback Vertex Set by Iterative Reduction to Vertex Cover

Authors: Sebastian Angrick, Ben Bals, Katrin Casel, Sarel Cohen, Tobias Friedrich, Niko Hastrich, Theresa Hradilak, Davis Issac, Otto Kißig, Jonas Schmidt, and Leo Wendt

Published in: LIPIcs, Volume 265, 21st International Symposium on Experimental Algorithms (SEA 2023)

Abstract
In the Directed Feedback Vertex Set (DFVS) problem, one is given a directed graph G = (V,E) and wants to find a minimum cardinality set S ⊆ V such that G-S is acyclic. DFVS is a fundamental problem in computer science and finds applications in areas such as deadlock detection. The problem was the subject of the 2022 PACE coding challenge. We develop a novel exact algorithm for the problem that is tailored to perform well on instances that are mostly bi-directed. For such instances, we adapt techniques from the well-researched vertex cover problem. Our core idea is an iterative reduction to vertex cover. To this end, we also develop a new reduction rule that reduces the number of not bi-directed edges. With the resulting algorithm, we were able to win third place in the exact track of the PACE challenge. We perform computational experiments and compare the running time to other exact algorithms, in particular to the winning algorithm in PACE. Our experiments show that we outpace the other algorithms on instances that have a low density of uni-directed edges.
Cite as

Sebastian Angrick, Ben Bals, Katrin Casel, Sarel Cohen, Tobias Friedrich, Niko Hastrich, Theresa Hradilak, Davis Issac, Otto Kißig, Jonas Schmidt, and Leo Wendt. Solving Directed Feedback Vertex Set by Iterative Reduction to Vertex Cover. In 21st International Symposium on Experimental Algorithms (SEA 2023). Leibniz International Proceedings in Informatics (LIPIcs), Volume 265, pp. 10:1-10:14, Schloss Dagstuhl - Leibniz-Zentrum für Informatik (2023)

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@InProceedings{angrick_et_al:LIPIcs.SEA.2023.10,
  author =	{Angrick, Sebastian and Bals, Ben and Casel, Katrin and Cohen, Sarel and Friedrich, Tobias and Hastrich, Niko and Hradilak, Theresa and Issac, Davis and Ki{\ss}ig, Otto and Schmidt, Jonas and Wendt, Leo},
  title =	{{Solving Directed Feedback Vertex Set by Iterative Reduction to Vertex Cover}},
  booktitle =	{21st International Symposium on Experimental Algorithms (SEA 2023)},
  pages =	{10:1--10:14},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-279-2},
  ISSN =	{1868-8969},
  year =	{2023},
  volume =	{265},
  editor =	{Georgiadis, Loukas},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SEA.2023.10},
  URN =		{urn:nbn:de:0030-drops-183602},
  doi =		{10.4230/LIPIcs.SEA.2023.10},
  annote =	{Keywords: directed feedback vertex set, vertex cover, reduction rules}
}
Document
DOI: 10.4230/LIPIcs.ESA.2019.37
Structural Rounding: Approximation Algorithms for Graphs Near an Algorithmically Tractable Class

Authors: Erik D. Demaine, Timothy D. Goodrich, Kyle Kloster, Brian Lavallee, Quanquan C. Liu, Blair D. Sullivan, Ali Vakilian, and Andrew van der Poel

Published in: LIPIcs, Volume 144, 27th Annual European Symposium on Algorithms (ESA 2019)

Abstract
We develop a framework for generalizing approximation algorithms from the structural graph algorithm literature so that they apply to graphs somewhat close to that class (a scenario we expect is common when working with real-world networks) while still guaranteeing approximation ratios. The idea is to edit a given graph via vertex- or edge-deletions to put the graph into an algorithmically tractable class, apply known approximation algorithms for that class, and then lift the solution to apply to the original graph. We give a general characterization of when an optimization problem is amenable to this approach, and show that it includes many well-studied graph problems, such as Independent Set, Vertex Cover, Feedback Vertex Set, Minimum Maximal Matching, Chromatic Number, (l-)Dominating Set, Edge (l-)Dominating Set, and Connected Dominating Set. To enable this framework, we develop new editing algorithms that find the approximately-fewest edits required to bring a given graph into one of a few important graph classes (in some cases these are bicriteria algorithms which simultaneously approximate both the number of editing operations and the target parameter of the family). For bounded degeneracy, we obtain an O(r log{n})-approximation and a bicriteria (4,4)-approximation which also extends to a smoother bicriteria trade-off. For bounded treewidth, we obtain a bicriteria (O(log^{1.5} n), O(sqrt{log w}))-approximation, and for bounded pathwidth, we obtain a bicriteria (O(log^{1.5} n), O(sqrt{log w} * log n))-approximation. For treedepth 2 (related to bounded expansion), we obtain a 4-approximation. We also prove complementary hardness-of-approximation results assuming P != NP: in particular, these problems are all log-factor inapproximable, except the last which is not approximable below some constant factor 2 (assuming UGC).
Cite as

Erik D. Demaine, Timothy D. Goodrich, Kyle Kloster, Brian Lavallee, Quanquan C. Liu, Blair D. Sullivan, Ali Vakilian, and Andrew van der Poel. Structural Rounding: Approximation Algorithms for Graphs Near an Algorithmically Tractable Class. In 27th Annual European Symposium on Algorithms (ESA 2019). Leibniz International Proceedings in Informatics (LIPIcs), Volume 144, pp. 37:1-37:15, Schloss Dagstuhl - Leibniz-Zentrum für Informatik (2019)

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@InProceedings{demaine_et_al:LIPIcs.ESA.2019.37,
  author =	{Demaine, Erik D. and Goodrich, Timothy D. and Kloster, Kyle and Lavallee, Brian and Liu, Quanquan C. and Sullivan, Blair D. and Vakilian, Ali and van der Poel, Andrew},
  title =	{{Structural Rounding: Approximation Algorithms for Graphs Near an Algorithmically Tractable Class}},
  booktitle =	{27th Annual European Symposium on Algorithms (ESA 2019)},
  pages =	{37:1--37:15},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-124-5},
  ISSN =	{1868-8969},
  year =	{2019},
  volume =	{144},
  editor =	{Bender, Michael A. and Svensson, Ola and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2019.37},
  URN =		{urn:nbn:de:0030-drops-111583},
  doi =		{10.4230/LIPIcs.ESA.2019.37},
  annote =	{Keywords: structural rounding, graph editing, approximation algorithms}
}
Document
DOI: 10.4230/LIPIcs.ICALP.2018.81
Optimally Sorting Evolving Data

Authors: Juan Jose Besa, William E. Devanny, David Eppstein, Michael T. Goodrich, and Timothy Johnson

Published in: LIPIcs, Volume 107, 45th International Colloquium on Automata, Languages, and Programming (ICALP 2018)

Abstract
We give optimal sorting algorithms in the evolving data framework, where an algorithm's input data is changing while the algorithm is executing. In this framework, instead of producing a final output, an algorithm attempts to maintain an output close to the correct output for the current state of the data, repeatedly updating its best estimate of a correct output over time. We show that a simple repeated insertion-sort algorithm can maintain an O(n) Kendall tau distance, with high probability, between a maintained list and an underlying total order of n items in an evolving data model where each comparison is followed by a swap between a random consecutive pair of items in the underlying total order. This result is asymptotically optimal, since there is an Omega(n) lower bound for Kendall tau distance for this problem. Our result closes the gap between this lower bound and the previous best algorithm for this problem, which maintains a Kendall tau distance of O(n log log n) with high probability. It also confirms previous experimental results that suggested that insertion sort tends to perform better than quicksort in practice.
Cite as

Juan Jose Besa, William E. Devanny, David Eppstein, Michael T. Goodrich, and Timothy Johnson. Optimally Sorting Evolving Data. In 45th International Colloquium on Automata, Languages, and Programming (ICALP 2018). Leibniz International Proceedings in Informatics (LIPIcs), Volume 107, pp. 81:1-81:13, Schloss Dagstuhl - Leibniz-Zentrum für Informatik (2018)

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@InProceedings{besa_et_al:LIPIcs.ICALP.2018.81,
  author =	{Besa, Juan Jose and Devanny, William E. and Eppstein, David and Goodrich, Michael T. and Johnson, Timothy},
  title =	{{Optimally Sorting Evolving Data}},
  booktitle =	{45th International Colloquium on Automata, Languages, and Programming (ICALP 2018)},
  pages =	{81:1--81:13},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-076-7},
  ISSN =	{1868-8969},
  year =	{2018},
  volume =	{107},
  editor =	{Chatzigiannakis, Ioannis and Kaklamanis, Christos and Marx, D\'{a}niel and Sannella, Donald},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2018.81},
  URN =		{urn:nbn:de:0030-drops-90858},
  doi =		{10.4230/LIPIcs.ICALP.2018.81},
  annote =	{Keywords: Sorting, Evolving data, Insertion sort}
}
Document
DOI: 10.4230/LIPIcs.SoCG.2018.23
Tree Drawings Revisited

Authors: Timothy M. Chan

Published in: LIPIcs, Volume 99, 34th International Symposium on Computational Geometry (SoCG 2018)

Abstract
We make progress on a number of open problems concerning the area requirement for drawing trees on a grid. We prove that 1) every tree of size n (with arbitrarily large degree) has a straight-line drawing with area n2^{O(sqrt{log log n log log log n})}, improving the longstanding O(n log n) bound; 2) every tree of size n (with arbitrarily large degree) has a straight-line upward drawing with area n sqrt{log n}(log log n)^{O(1)}, improving the longstanding O(n log n) bound; 3) every binary tree of size n has a straight-line orthogonal drawing with area n2^{O(log^*n)}, improving the previous O(n log log n) bound by Shin, Kim, and Chwa (1996) and Chan, Goodrich, Kosaraju, and Tamassia (1996); 4) every binary tree of size n has a straight-line order-preserving drawing with area n2^{O(log^*n)}, improving the previous O(n log log n) bound by Garg and Rusu (2003); 5) every binary tree of size n has a straight-line orthogonal order-preserving drawing with area n2^{O(sqrt{log n})}, improving the O(n^{3/2}) previous bound by Frati (2007).
Cite as

Timothy M. Chan. Tree Drawings Revisited. In 34th International Symposium on Computational Geometry (SoCG 2018). Leibniz International Proceedings in Informatics (LIPIcs), Volume 99, pp. 23:1-23:15, Schloss Dagstuhl - Leibniz-Zentrum für Informatik (2018)

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@InProceedings{chan:LIPIcs.SoCG.2018.23,
  author =	{Chan, Timothy M.},
  title =	{{Tree Drawings Revisited}},
  booktitle =	{34th International Symposium on Computational Geometry (SoCG 2018)},
  pages =	{23:1--23:15},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-066-8},
  ISSN =	{1868-8969},
  year =	{2018},
  volume =	{99},
  editor =	{Speckmann, Bettina and T\'{o}th, Csaba D.},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2018.23},
  URN =		{urn:nbn:de:0030-drops-87364},
  doi =		{10.4230/LIPIcs.SoCG.2018.23},
  annote =	{Keywords: graph drawing, trees, recursion}
}
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