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Õptimal Dynamic Time Warping on Run-Length Encoded Strings

Authors Itai Boneh, Shay Golan , Shay Mozes , Oren Weimann

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Author Details

Itai Boneh
  • Reichman University, Herzliya, Israel
  • University of Haifa, Israel
Shay Golan
  • Reichman University, Herzliya, Israel
  • University of Haifa, Israel
Shay Mozes
  • Reichman University, Herzliya, Israel
Oren Weimann
  • University of Haifa, Israel

Funding

Israel Science Foundation grant 810/21

Cite AsGet BibTex

Itai Boneh, Shay Golan, Shay Mozes, and Oren Weimann. Õptimal Dynamic Time Warping on Run-Length Encoded Strings. In 51st International Colloquium on Automata, Languages, and Programming (ICALP 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 297, pp. 30:1-30:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)
https://doi.org/10.4230/LIPIcs.ICALP.2024.30

Abstract

Dynamic Time Warping (DTW) distance is the optimal cost of matching two strings when extending runs of letters is for free. Therefore, it is natural to measure the time complexity of DTW in terms of the number of runs n (rather than the string lengths N). In this paper, we give an Õ(n²) time algorithm for computing the DTW distance. This matches (up to log factors) the known (conditional) lower bound, and should be compared with the previous fastest O(n³) time exact algorithm and the Õ(n²) time approximation algorithm. Our method also immediately implies an Õ(nk) time algorithm when the distance is bounded by k. This should be compared with the previous fastest O(n²k) and O(Nk) time exact algorithms and the Õ(nk) time approximation algorithm.

Subject Classification

ACM Subject Classification
  • Theory of computation → Pattern matching
  • Theory of computation → Shortest paths
Keywords
  • Dynamic time warping
  • Fréchet distance
  • edit distance
  • run-length encoding

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