StephenHwang/MEMO

Hwang, Stephen; Brown, Nathaniel K.; Ahmed, Omar Y.; Jenike, Katharine M.; Kovaka, Sam; Schatz, Michael C.; Langmead, Ben

doi:10.4230/artifacts.22508

Artifact

StephenHwang/MEMO Software

Authors Stephen Hwang , Nathaniel K. Brown , Omar Y. Ahmed , Katharine M. Jenike , Sam Kovaka , Michael C. Schatz , Ben Langmead

Part of: Collection: Supplementary Materials
License: MIT License
Publication Date: 2024-11-28

Document Identifiers

DOI: 10.4230/artifacts.22508
URN: urn:nbn:de:0030-drops-225087

Author Details

Stephen Hwang

XDBio Program, Johns Hopkins University, Baltimore, MD, USA

Nathaniel K. Brown

Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA

Omar Y. Ahmed

Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA

Katharine M. Jenike

Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA

Sam Kovaka

Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA

Michael C. Schatz

Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA

Ben Langmead

Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA

Content

Software (Source Code): https://github.com/StephenHwang/MEMO
archived version

Version/Status

Content created at: 2023-04-05

Cite As Get BibTex

Stephen Hwang, Nathaniel K. Brown, Omar Y. Ahmed, Katharine M. Jenike, Sam Kovaka, Michael C. Schatz, Ben Langmead. StephenHwang/MEMO (Software, Source Code). Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024) https://doi.org/10.4230/artifacts.22508

Description

MEMO: MEM-based pangenome indexing for k-mer queries

Subject Classification

Programming Languages

Python
Shell
Dockerfile

Metrics

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