DiscrimAlign

Ciach, Michał Aleksander; Zacharopoulou, Elissavet; Startek, Michał Piotr; Miasojedow, Błażej; Alexiou, Panagiotis

doi:10.4230/artifacts.27630

Artifact

DiscrimAlign Software

Authors Michał Aleksander Ciach , Elissavet Zacharopoulou , Michał Piotr Startek , Błażej Miasojedow , Panagiotis Alexiou

Part of: Collection: Supplementary Materials
License: MIT License
Publication Date: 2026-08-27

Document Identifiers

DOI: 10.4230/artifacts.27630
URN: urn:nbn:de:0030-drops-276308

Author Details

Michał Aleksander Ciach

Department of Applied Biomedical Science, Faculty of Health Sciences, University of Malta, Msida, Malta

Elissavet Zacharopoulou

Department of Applied Biomedical Science, Faculty of Health Sciences, University of Malta, Msida, Malta

Michał Piotr Startek

Faculty of Mathematics, Informatics and Mechanics, University of Warsaw, Poland

Błażej Miasojedow

Faculty of Mathematics, Informatics and Mechanics, University of Warsaw, Poland

Panagiotis Alexiou

Department of Applied Biomedical Science, Faculty of Health Sciences, University of Malta, Msida, Malta

Content

Software (Source Code): https://github.com/BioGeMT/DiscrimAlign
archived version

Version/Status

Content created at: 2026-08-11
Status: Active (at the time of publication 2026-08-27)

Cite As Get BibTex

Michał Aleksander Ciach, Elissavet Zacharopoulou, Michał Piotr Startek, Błażej Miasojedow, Panagiotis Alexiou. DiscrimAlign (Software, Source Code). Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026) https://doi.org/10.4230/artifacts.27630

Description

Discriminative learning framework for parameters of alignment of biological sequences

Subject Classification

Keywords

Sequence Alignment
Discriminative learning
Substitution matrix
Parameter learning
Estimation
Logistic regression
DNA
protein
amino acid

Programming Languages

Python

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