Context Dependent Analysis of BioAmbients

Authors Henrik Pilegaard, Hanne Riis-Nielson, Flemming Nielson

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Henrik Pilegaard
Hanne Riis-Nielson
Flemming Nielson

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Henrik Pilegaard, Hanne Riis-Nielson, and Flemming Nielson. Context Dependent Analysis of BioAmbients. In Simulation and Verification of Dynamic Systems. Dagstuhl Seminar Proceedings, Volume 6161, pp. 1-18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2006)


BioAmbients is a derivative of mobile ambients that has shown promise of describing interesting features of the behaviour of biological systems. The technical contribution of this paper is to extend the Flow Logic approach to static analysis with a couple of new techniques in order to give precise information about the behaviour of systems written in BioAmbients. Applying the development to a simple model of a cell releasing nutrients from food compunds we illustrate how the proposed analysis does indeed improve on previous efforts.
  • Static analysis
  • abstract interpretation
  • BioAmbients


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