<h2>LIPIcs, Volume 143, WABI 2019</h2>
<ul>
<li>
<span class="authors">Katharina T. Huber and Dan Gusfield</span>
<span class="title">LIPIcs, Volume 143, WABI'19, Complete Volume</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019">10.4230/LIPIcs.WABI.2019</a>
</li>
<li>
<span class="authors">Katharina T. Huber and Dan Gusfield</span>
<span class="title">Front Matter, Table of Contents, Preface, Conference Organization</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.0">10.4230/LIPIcs.WABI.2019.0</a>
</li>
<li>
<span class="authors">Jesper Jansson, Konstantinos Mampentzidis, and Sandhya T. P.</span>
<span class="title">Building a Small and Informative Phylogenetic Supertree</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.1">10.4230/LIPIcs.WABI.2019.1</a>
</li>
<li>
<span class="authors">Roland Wittler</span>
<span class="title">Alignment- and Reference-Free Phylogenomics with Colored de Bruijn Graphs</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.2">10.4230/LIPIcs.WABI.2019.2</a>
</li>
<li>
<span class="authors">Nathan L. Clement</span>
<span class="title">Quantified Uncertainty of Flexible Protein-Protein Docking Algorithms</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.3">10.4230/LIPIcs.WABI.2019.3</a>
</li>
<li>
<span class="authors">Sarah Christensen, Erin K. Molloy, Pranjal Vachaspati, and Tandy Warnow</span>
<span class="title">TRACTION: Fast Non-Parametric Improvement of Estimated Gene Trees</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.4">10.4230/LIPIcs.WABI.2019.4</a>
</li>
<li>
<span class="authors">Kohei Yamada, Zhi-Zhong Chen, and Lusheng Wang</span>
<span class="title">Better Practical Algorithms for rSPR Distance and Hybridization Number</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.5">10.4230/LIPIcs.WABI.2019.5</a>
</li>
<li>
<span class="authors">Georgi D. Georgiev, Kevin F. Dodd, and Brian Y. Chen</span>
<span class="title">pClay: A Precise Parallel Algorithm for Comparing Molecular Surfaces</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.6">10.4230/LIPIcs.WABI.2019.6</a>
</li>
<li>
<span class="authors">Kavya Vaddadi, Rajgopal Srinivasan, and Naveen Sivadasan</span>
<span class="title">Read Mapping on Genome Variation Graphs</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.7">10.4230/LIPIcs.WABI.2019.7</a>
</li>
<li>
<span class="authors">Jarno Alanko, Hideo Bannai, Bastien Cazaux, Pierre Peterlongo, and Jens Stoye</span>
<span class="title">Finding All Maximal Perfect Haplotype Blocks in Linear Time</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.8">10.4230/LIPIcs.WABI.2019.8</a>
</li>
<li>
<span class="authors">Roni Zoller, Meirav Zehavi, and Michal Ziv-Ukelson</span>
<span class="title">A New Paradigm for Identifying Reconciliation-Scenario Altering Mutations Conferring Environmental Adaptation</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.9">10.4230/LIPIcs.WABI.2019.9</a>
</li>
<li>
<span class="authors">Jie Liu, Yuanhao Huang, Ritambhara Singh, Jean-Philippe Vert, and William Stafford Noble</span>
<span class="title">Jointly Embedding Multiple Single-Cell Omics Measurements</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.10">10.4230/LIPIcs.WABI.2019.10</a>
</li>
<li>
<span class="authors">Alexandra Gesine Cauer, Gürkan Yardımcı, Jean-Philippe Vert, Nelle Varoquaux, and William Stafford Noble</span>
<span class="title">Inferring Diploid 3D Chromatin Structures from Hi-C Data</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.11">10.4230/LIPIcs.WABI.2019.11</a>
</li>
<li>
<span class="authors">Alexey Markin and Oliver Eulenstein</span>
<span class="title">Consensus Clusters in Robinson-Foulds Reticulation Networks</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.12">10.4230/LIPIcs.WABI.2019.12</a>
</li>
<li>
<span class="authors">Pijus Simonaitis, Annie Chateau, and Krister M. Swenson</span>
<span class="title">Weighted Minimum-Length Rearrangement Scenarios</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.13">10.4230/LIPIcs.WABI.2019.13</a>
</li>
<li>
<span class="authors">Milad Miladi, Martin Raden, Sebastian Will, and Rolf Backofen</span>
<span class="title">Fast and Accurate Structure Probability Estimation for Simultaneous Alignment and Folding of RNAs</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.14">10.4230/LIPIcs.WABI.2019.14</a>
</li>
<li>
<span class="authors">Hongyi Xin, Mingfu Shao, and Carl Kingsford</span>
<span class="title">Context-Aware Seeds for Read Mapping</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.15">10.4230/LIPIcs.WABI.2019.15</a>
</li>
<li>
<span class="authors">Alexander Tiskin</span>
<span class="title">Bounded-Length Smith-Waterman Alignment</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.16">10.4230/LIPIcs.WABI.2019.16</a>
</li>
<li>
<span class="authors">Chirag Jain, Haowen Zhang, Alexander Dilthey, and Srinivas Aluru</span>
<span class="title">Validating Paired-End Read Alignments in Sequence Graphs</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.17">10.4230/LIPIcs.WABI.2019.17</a>
</li>
<li>
<span class="authors">Yutong Qiu, Cong Ma, Han Xie, and Carl Kingsford</span>
<span class="title">Detecting Transcriptomic Structural Variants in Heterogeneous Contexts via the Multiple Compatible Arrangements Problem</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.18">10.4230/LIPIcs.WABI.2019.18</a>
</li>
<li>
<span class="authors">Qi Wang, R. A. Leo Elworth, Tian Rui Liu, and Todd J. Treangen</span>
<span class="title">Faster Pan-Genome Construction for Efficient Differentiation of Naturally Occurring and Engineered Plasmids with Plaster</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.19">10.4230/LIPIcs.WABI.2019.19</a>
</li>
<li>
<span class="authors">Jakub Truszkowski, Olivier Gascuel, and Krister M. Swenson</span>
<span class="title">Rapidly Computing the Phylogenetic Transfer Index</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.20">10.4230/LIPIcs.WABI.2019.20</a>
</li>
<li>
<span class="authors">Zhen Cao, Jiafan Zhu, and Luay Nakhleh</span>
<span class="title">Empirical Performance of Tree-Based Inference of Phylogenetic Networks</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.21">10.4230/LIPIcs.WABI.2019.21</a>
</li>
<li>
<span class="authors">Mohammadamin Edrisi, Hamim Zafar, and Luay Nakhleh</span>
<span class="title">A Combinatorial Approach for Single-cell Variant Detection via Phylogenetic Inference</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.22">10.4230/LIPIcs.WABI.2019.22</a>
</li>
<li>
<span class="authors">Natalie Sauerwald, Yihang Shen, and Carl Kingsford</span>
<span class="title">Topological Data Analysis Reveals Principles of Chromosome Structure in Cellular Differentiation</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.23">10.4230/LIPIcs.WABI.2019.23</a>
</li>
<li>
<span class="authors">Evgeny Polevikov and Mikhail Kolmogorov</span>
<span class="title">Synteny Paths for Assembly Graphs Comparison</span>
<a class="doi" href="https://doi.org/10.4230/LIPIcs.WABI.2019.24">10.4230/LIPIcs.WABI.2019.24</a>
</li>
</ul>
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