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Directed topology augments the concept of a topological space with a notion of directed paths. This leads to a category of directed spaces, in which the morphisms are continuous maps respecting directed paths. Directed topology thereby enables an accurate representation of computation paths in concurrent systems that usually cannot be reversed. Even though ideas from algebraic topology have analogues in directed topology, the directedness drastically changes how spaces can be characterised. For instance, while an important homotopy invariant of a topological space is its fundamental groupoid, for directed spaces this has to be replaced by the fundamental category because directed paths are not necessarily reversible. In this paper, we present a Lean 4 formalisation of directed spaces and of a Van Kampen theorem for them, which allows the fundamental category of a directed space to be computed in terms of the fundamental categories of subspaces. Part of this formalisation is also a significant theory of directed spaces, directed homotopy theory and path coverings, which can serve as basis for future formalisations of directed topology. The formalisation in Lean can also be used in computer-assisted reasoning about the behaviour of concurrent systems that have been represented as directed spaces.