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Documents authored by Munch, Elizabeth


Document
A Family of Metrics from the Truncated Smoothing of Reeb Graphs

Authors: Erin Wolf Chambers, Elizabeth Munch, and Tim Ophelders

Published in: LIPIcs, Volume 189, 37th International Symposium on Computational Geometry (SoCG 2021)


Abstract
In this paper, we introduce an extension of smoothing on Reeb graphs, which we call truncated smoothing; this in turn allows us to define a new family of metrics which generalize the interleaving distance for Reeb graphs. Intuitively, we "chop off" parts near local minima and maxima during the course of smoothing, where the amount cut is controlled by a parameter τ. After formalizing truncation as a functor, we show that when applied after the smoothing functor, this prevents extensive expansion of the range of the function, and yields particularly nice properties (such as maintaining connectivity) when combined with smoothing for 0 ≤ τ ≤ 2ε, where ε is the smoothing parameter. Then, for the restriction of τ ∈ [0,ε], we have additional structure which we can take advantage of to construct a categorical flow for any choice of slope m ∈ [0,1]. Using the infrastructure built for a category with a flow, this then gives an interleaving distance for every m ∈ [0,1], which is a generalization of the original interleaving distance, which is the case m = 0. While the resulting metrics are not stable, we show that any pair of these for m, m' ∈ [0,1) are strongly equivalent metrics, which in turn gives stability of each metric up to a multiplicative constant. We conclude by discussing implications of this metric within the broader family of metrics for Reeb graphs.

Cite as

Erin Wolf Chambers, Elizabeth Munch, and Tim Ophelders. A Family of Metrics from the Truncated Smoothing of Reeb Graphs. In 37th International Symposium on Computational Geometry (SoCG 2021). Leibniz International Proceedings in Informatics (LIPIcs), Volume 189, pp. 22:1-22:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2021)


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@InProceedings{chambers_et_al:LIPIcs.SoCG.2021.22,
  author =	{Chambers, Erin Wolf and Munch, Elizabeth and Ophelders, Tim},
  title =	{{A Family of Metrics from the Truncated Smoothing of Reeb Graphs}},
  booktitle =	{37th International Symposium on Computational Geometry (SoCG 2021)},
  pages =	{22:1--22:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-184-9},
  ISSN =	{1868-8969},
  year =	{2021},
  volume =	{189},
  editor =	{Buchin, Kevin and Colin de Verdi\`{e}re, \'{E}ric},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2021.22},
  URN =		{urn:nbn:de:0030-drops-138218},
  doi =		{10.4230/LIPIcs.SoCG.2021.22},
  annote =	{Keywords: Reeb graphs, interleaving distance, graphical signatures}
}
Document
Convergence between Categorical Representations of Reeb Space and Mapper

Authors: Elizabeth Munch and Bei Wang

Published in: LIPIcs, Volume 51, 32nd International Symposium on Computational Geometry (SoCG 2016)


Abstract
The Reeb space, which generalizes the notion of a Reeb graph, is one of the few tools in topological data analysis and visualization suitable for the study of multivariate scientific datasets. First introduced by Edelsbrunner et al., it compresses the components of the level sets of a multivariate mapping and obtains a summary representation of their relationships. A related construction called mapper, and a special case of the mapper construction called the Joint Contour Net have been shown to be effective in visual analytics. Mapper and JCN are intuitively regarded as discrete approximations of the Reeb space, however without formal proofs or approximation guarantees. An open question has been proposed by Dey et al. as to whether the mapper construction converges to the Reeb space in the limit. In this paper, we are interested in developing the theoretical understanding of the relationship between the Reeb space and its discrete approximations to support its use in practical data analysis. Using tools from category theory, we formally prove the convergence between the Reeb space and mapper in terms of an interleaving distance between their categorical representations. Given a sequence of refined discretizations, we prove that these approximations converge to the Reeb space in the interleaving distance; this also helps to quantify the approximation quality of the discretization at a fixed resolution.

Cite as

Elizabeth Munch and Bei Wang. Convergence between Categorical Representations of Reeb Space and Mapper. In 32nd International Symposium on Computational Geometry (SoCG 2016). Leibniz International Proceedings in Informatics (LIPIcs), Volume 51, pp. 53:1-53:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2016)


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@InProceedings{munch_et_al:LIPIcs.SoCG.2016.53,
  author =	{Munch, Elizabeth and Wang, Bei},
  title =	{{Convergence between Categorical Representations of Reeb Space and Mapper}},
  booktitle =	{32nd International Symposium on Computational Geometry (SoCG 2016)},
  pages =	{53:1--53:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-009-5},
  ISSN =	{1868-8969},
  year =	{2016},
  volume =	{51},
  editor =	{Fekete, S\'{a}ndor and Lubiw, Anna},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2016.53},
  URN =		{urn:nbn:de:0030-drops-59454},
  doi =		{10.4230/LIPIcs.SoCG.2016.53},
  annote =	{Keywords: Topological data analysis, Reeb space, mapper, category theory}
}
Document
Strong Equivalence of the Interleaving and Functional Distortion Metrics for Reeb Graphs

Authors: Ulrich Bauer, Elizabeth Munch, and Yusu Wang

Published in: LIPIcs, Volume 34, 31st International Symposium on Computational Geometry (SoCG 2015)


Abstract
The Reeb graph is a construction that studies a topological space through the lens of a real valued function. It has been commonly used in applications, however its use on real data means that it is desirable and increasingly necessary to have methods for comparison of Reeb graphs. Recently, several metrics on the set of Reeb graphs have been proposed. In this paper, we focus on two: the functional distortion distance and the interleaving distance. The former is based on the Gromov-Hausdorff distance, while the latter utilizes the equivalence between Reeb graphs and a particular class of cosheaves. However, both are defined by constructing a near-isomorphism between the two graphs of study. In this paper, we show that the two metrics are strongly equivalent on the space of Reeb graphs. Our result also implies the bottleneck stability for persistence diagrams in terms of the Reeb graph interleaving distance.

Cite as

Ulrich Bauer, Elizabeth Munch, and Yusu Wang. Strong Equivalence of the Interleaving and Functional Distortion Metrics for Reeb Graphs. In 31st International Symposium on Computational Geometry (SoCG 2015). Leibniz International Proceedings in Informatics (LIPIcs), Volume 34, pp. 461-475, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2015)


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@InProceedings{bauer_et_al:LIPIcs.SOCG.2015.461,
  author =	{Bauer, Ulrich and Munch, Elizabeth and Wang, Yusu},
  title =	{{Strong Equivalence of the Interleaving and Functional Distortion Metrics for Reeb Graphs}},
  booktitle =	{31st International Symposium on Computational Geometry (SoCG 2015)},
  pages =	{461--475},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-939897-83-5},
  ISSN =	{1868-8969},
  year =	{2015},
  volume =	{34},
  editor =	{Arge, Lars and Pach, J\'{a}nos},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SOCG.2015.461},
  URN =		{urn:nbn:de:0030-drops-51467},
  doi =		{10.4230/LIPIcs.SOCG.2015.461},
  annote =	{Keywords: Reeb graph, interleaving distance, functional distortion distance}
}
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