21 Search Results for "Anderson, Matthew"

Document
DOI: 10.4230/LIPIcs.ITCS.2026.46
Symmetric Algebraic Circuits and Homomorphism Polynomials

Authors: Anuj Dawar, Benedikt Pago, and Tim Seppelt

Published in: LIPIcs, Volume 362, 17th Innovations in Theoretical Computer Science Conference (ITCS 2026)

Abstract
The central open question of algebraic complexity is whether VP ≠ VNP, which is saying that the permanent cannot be represented by families of polynomial-size algebraic circuits. For symmetric algebraic circuits, this has been confirmed by Dawar and Wilsenach (2020), who showed exponential lower bounds on the size of symmetric circuits for the permanent. In this work, we set out to develop a more general symmetric algebraic complexity theory. Our main result is that a family of symmetric polynomials admits small symmetric circuits if and only if they can be written as a linear combination of homomorphism counting polynomials of graphs of bounded treewidth. We also establish a relationship between the symmetric complexity of subgraph counting polynomials and the vertex cover number of the pattern graph. As a concrete example, we examine the symmetric complexity of immanant families (a generalisation of the determinant and permanent) and show that a known conditional dichotomy due to Curticapean (2021) holds unconditionally in the symmetric setting.
Cite as

Anuj Dawar, Benedikt Pago, and Tim Seppelt. Symmetric Algebraic Circuits and Homomorphism Polynomials. In 17th Innovations in Theoretical Computer Science Conference (ITCS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 362, pp. 46:1-46:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{dawar_et_al:LIPIcs.ITCS.2026.46,
  author =	{Dawar, Anuj and Pago, Benedikt and Seppelt, Tim},
  title =	{{Symmetric Algebraic Circuits and Homomorphism Polynomials}},
  booktitle =	{17th Innovations in Theoretical Computer Science Conference (ITCS 2026)},
  pages =	{46:1--46:15},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-410-9},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{362},
  editor =	{Saraf, Shubhangi},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2026.46},
  URN =		{urn:nbn:de:0030-drops-253330},
  doi =		{10.4230/LIPIcs.ITCS.2026.46},
  annote =	{Keywords: algebraic complexity, finite model theory, symmetric circuits, homomorphism counting, graph homomorphism, treewidth, counting width, first-order logic with counting quantifiers}
}
Document
DOI: 10.4230/LIPIcs.ITCS.2026.9
On Closure Properties of Read-Once Oblivious Algebraic Branching Programs

Authors: Robert Andrews, Jules Armand, Prateek Dwivedi, Magnus Rahbek Dalgaard Hansen, Nutan Limaye, Srikanth Srinivasan, and Sébastien Tavenas

Published in: LIPIcs, Volume 362, 17th Innovations in Theoretical Computer Science Conference (ITCS 2026)

Abstract
We investigate the closure properties of read-once oblivious Algebraic Branching Programs (roABPs) under various natural algebraic operations and prove the following. - Non-closure under factoring: There is a sequence of explicit polynomials (f_n(x₁,…, x_n))_n that have poly(n)-sized roABPs such that some irreducible factor of f_n requires roABPs of superpolynomial size in any order. - Non-closure under powering: There is a sequence of polynomials (f_n(x₁,…, x_n))_n with poly(n)-sized roABPs such that any super-constant power of f_n does not have roABPs of polynomial size in any order (and f_nⁿ requires exponential size in any order). - Non-closure under symmetric operations: There are symmetric polynomials (f_n(e₁,…, e_n))_n that have roABPs of polynomial size such that f_n(x₁,…, x_n) do not have roABPs of subexponential size. (Here, e₁,…, e_n denote the elementary symmetric polynomials in n variables.) These results should be viewed in light of known results on models such as algebraic circuits, (general) algebraic branching programs, formulas and constant-depth circuits, all of which are known to be closed under these operations. To prove non-closure under factoring, we construct hard polynomials based on expander graphs using gadgets that lift their hardness from sparse polynomials to roABPs. For symmetric compositions, we show that the circulant polynomial requires roABPs of exponential size in every variable order.
Cite as

Robert Andrews, Jules Armand, Prateek Dwivedi, Magnus Rahbek Dalgaard Hansen, Nutan Limaye, Srikanth Srinivasan, and Sébastien Tavenas. On Closure Properties of Read-Once Oblivious Algebraic Branching Programs. In 17th Innovations in Theoretical Computer Science Conference (ITCS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 362, pp. 9:1-9:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{andrews_et_al:LIPIcs.ITCS.2026.9,
  author =	{Andrews, Robert and Armand, Jules and Dwivedi, Prateek and Hansen, Magnus Rahbek Dalgaard and Limaye, Nutan and Srinivasan, Srikanth and Tavenas, S\'{e}bastien},
  title =	{{On Closure Properties of Read-Once Oblivious Algebraic Branching Programs}},
  booktitle =	{17th Innovations in Theoretical Computer Science Conference (ITCS 2026)},
  pages =	{9:1--9:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-410-9},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{362},
  editor =	{Saraf, Shubhangi},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2026.9},
  URN =		{urn:nbn:de:0030-drops-252964},
  doi =		{10.4230/LIPIcs.ITCS.2026.9},
  annote =	{Keywords: Factoring, Closure Properties, Sparsity Bounds, Symmetric Polynomials, roABP, Expander Graphs}
}
Document
DOI: 10.4230/LIPIcs.ITCS.2026.56
The Hardness of Learning Quantum Circuits and Its Cryptographic Applications

Authors: Bill Fefferman, Soumik Ghosh, Makrand Sinha, and Henry Yuen

Published in: LIPIcs, Volume 362, 17th Innovations in Theoretical Computer Science Conference (ITCS 2026)

Abstract
We show that concrete hardness assumptions about learning or cloning the output state of a random quantum circuit can be used as the foundation for secure quantum cryptography. In particular, under these assumptions we construct secure one-way state generators (OWSGs), digital signature schemes, quantum bit commitments, and private key encryption schemes. We also discuss evidence for these hardness assumptions by analyzing the best-known quantum learning algorithms, as well as proving black-box lower bounds for cloning and learning given state preparation oracles. Our random circuit-based constructions provide concrete instantiations of quantum cryptographic primitives whose security do not depend on the existence of one-way functions. The use of random circuits in our constructions also opens the door to {NISQ-friendly quantum cryptography}. We discuss noise tolerant versions of our OWSG and digital signature constructions which can potentially be implementable on noisy quantum computers connected by a quantum network. On the other hand, they are still secure against {noiseless} quantum adversaries, raising the intriguing possibility of a useful implementation of an end-to-end cryptographic protocol on near-term quantum computers. Finally, our explorations suggest that the rich interconnections between learning theory and cryptography in classical theoretical computer science also extend to the quantum setting.
Cite as

Bill Fefferman, Soumik Ghosh, Makrand Sinha, and Henry Yuen. The Hardness of Learning Quantum Circuits and Its Cryptographic Applications. In 17th Innovations in Theoretical Computer Science Conference (ITCS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 362, pp. 56:1-56:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{fefferman_et_al:LIPIcs.ITCS.2026.56,
  author =	{Fefferman, Bill and Ghosh, Soumik and Sinha, Makrand and Yuen, Henry},
  title =	{{The Hardness of Learning Quantum Circuits and Its Cryptographic Applications}},
  booktitle =	{17th Innovations in Theoretical Computer Science Conference (ITCS 2026)},
  pages =	{56:1--56:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-410-9},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{362},
  editor =	{Saraf, Shubhangi},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2026.56},
  URN =		{urn:nbn:de:0030-drops-253431},
  doi =		{10.4230/LIPIcs.ITCS.2026.56},
  annote =	{Keywords: quantum learning, quantum circuits, cryptographic hardness, one-way state generators}
}
Document
DOI: 10.4230/LIPIcs.ITCS.2026.35
Symmetric Quantum Computation

Authors: Davi Castro-Silva, Tom Gur, and Sergii Strelchuk

Published in: LIPIcs, Volume 362, 17th Innovations in Theoretical Computer Science Conference (ITCS 2026)

Abstract
We introduce a systematic study of symmetric quantum circuits, a new restricted model of quantum computation that preserves the symmetries of the problems it solves. This model is well-adapted for studying the role of symmetry in quantum speedups, extending a central notion of symmetric computation studied in the classical setting. Our results establish that symmetric quantum circuits are fundamentally more powerful than their classical counterparts. First, we give efficient symmetric circuits for key quantum techniques such as amplitude amplification, phase estimation and linear combination of unitaries. In addition, we show how the task of symmetric state preparation can be performed efficiently in several natural cases. Finally, we demonstrate an exponential separation in the symmetric setting for the problem XOR-SAT, which requires exponential-size symmetric classical circuits but can be solved by polynomial-size symmetric quantum circuits.
Cite as

Davi Castro-Silva, Tom Gur, and Sergii Strelchuk. Symmetric Quantum Computation. In 17th Innovations in Theoretical Computer Science Conference (ITCS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 362, pp. 35:1-35:10, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{castrosilva_et_al:LIPIcs.ITCS.2026.35,
  author =	{Castro-Silva, Davi and Gur, Tom and Strelchuk, Sergii},
  title =	{{Symmetric Quantum Computation}},
  booktitle =	{17th Innovations in Theoretical Computer Science Conference (ITCS 2026)},
  pages =	{35:1--35:10},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-410-9},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{362},
  editor =	{Saraf, Shubhangi},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2026.35},
  URN =		{urn:nbn:de:0030-drops-253223},
  doi =		{10.4230/LIPIcs.ITCS.2026.35},
  annote =	{Keywords: Quantum computing, complexity theory, symmetries}
}
Document
DOI: 10.4230/LIPIcs.OPODIS.2025.31
Fast Re-Routing in Networks: On the Complexity of Perfect Resilience

Authors: Matthias Bentert, Esra Ceylan, Valentin Hübner, Stefan Schmid, and Jiří Srba

Published in: LIPIcs, Volume 361, 29th International Conference on Principles of Distributed Systems (OPODIS 2025)

Abstract
To achieve fast recovery from link failures, most modern communication networks feature fully decentralized fast re-routing mechanisms. These re-routing mechanisms rely on pre-installed static re-routing rules at the nodes (the routers), which depend only on local failure information, namely on the failed links incident to the node. Ideally, a network is perfectly resilient: the re-routing rules ensure that packets are always successfully routed to their destinations as long as the source and the destination are still physically connected in the underlying network after the failures. Unfortunately, there are examples where achieving perfect resilience is not possible. Surprisingly, only very little is known about the algorithmic aspect of when and how perfect resilience can be achieved. We investigate the computational complexity of analyzing such local fast re-routing mechanisms. Our main result is a negative one: we show that even checking whether a given set of static re-routing rules ensures perfect resilience is coNP-complete. Additionally, we investigate other fundamental variations of the problem. In particular, we show that our coNP-completeness proof also applies to scenarios where the re-routing rules have specific patterns (known as skipping in the literature). On the positive side, for scenarios where nodes do not have information about the link from which a packet arrived (the so-called in-port), we present a linear-time algorithm to realize perfect resilience whenever possible (which we show can also be determined in linear time).
Cite as

Matthias Bentert, Esra Ceylan, Valentin Hübner, Stefan Schmid, and Jiří Srba. Fast Re-Routing in Networks: On the Complexity of Perfect Resilience. In 29th International Conference on Principles of Distributed Systems (OPODIS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 361, pp. 31:1-31:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{bentert_et_al:LIPIcs.OPODIS.2025.31,
  author =	{Bentert, Matthias and Ceylan, Esra and H\"{u}bner, Valentin and Schmid, Stefan and Srba, Ji\v{r}{\'\i}},
  title =	{{Fast Re-Routing in Networks: On the Complexity of Perfect Resilience}},
  booktitle =	{29th International Conference on Principles of Distributed Systems (OPODIS 2025)},
  pages =	{31:1--31:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-409-3},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{361},
  editor =	{Arusoaie, Andrei and Onica, Emanuel and Spear, Michael and Tucci-Piergiovanni, Sara},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.OPODIS.2025.31},
  URN =		{urn:nbn:de:0030-drops-252040},
  doi =		{10.4230/LIPIcs.OPODIS.2025.31},
  annote =	{Keywords: routing in computer networks, fast re-route, perfect resilience, complexity}
}
Document
Research
DOI: 10.4230/TGDK.3.3.4
Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web

Authors: Florian Ruosch, Cristina Sarasua, and Abraham Bernstein

Published in: TGDK, Volume 3, Issue 3 (2025). Transactions on Graph Data and Knowledge, Volume 3, Issue 3

Abstract
In Argument Mining, predicting argumentative relations between texts (or spans) remains one of the most challenging aspects, even more so in the cross-document setting. This paper makes three key contributions to advance research in this domain. We first extend an existing dataset, the Sci-Arg corpus, by annotating it with explicit inter-document argumentative relations, thereby allowing arguments to be distributed over several documents forming an Argument Web; these new annotations are published using Semantic Web technologies (RDF, OWL). Second, we explore and evaluate three automated approaches for predicting these inter-document argumentative relations, establishing critical baselines on the new dataset. We find that a simple classifier based on discourse indicators with access to context outperforms neural methods. Third, we conduct a comparative analysis of these approaches for both intra- and inter-document settings, identifying statistically significant differences in results that indicate the necessity of distinguishing between these two scenarios. Our findings highlight significant challenges in this complex domain and open crucial avenues for future research on the Argument Web of Science, particularly for those interested in leveraging Semantic Web technologies and knowledge graphs to understand scholarly discourse. With this, we provide the first stepping stones in the form of a benchmark dataset, three baseline methods, and an initial analysis for a systematic exploration of this field relevant to the Web of Data and Science.
Cite as

Florian Ruosch, Cristina Sarasua, and Abraham Bernstein. Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web. In Transactions on Graph Data and Knowledge (TGDK), Volume 3, Issue 3, pp. 4:1-4:33, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@Article{ruosch_et_al:TGDK.3.3.4,
  author =	{Ruosch, Florian and Sarasua, Cristina and Bernstein, Abraham},
  title =	{{Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{4:1--4:33},
  ISSN =	{2942-7517},
  year =	{2025},
  volume =	{3},
  number =	{3},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.3.3.4},
  URN =		{urn:nbn:de:0030-drops-252159},
  doi =		{10.4230/TGDK.3.3.4},
  annote =	{Keywords: Argument Mining, Large Language Models, Knowledge Graphs, Link Prediction}
}
Document
DOI: 10.4230/LIPIcs.ISAAC.2025.7
Polynomial Equivalence of Extended Chemical Reaction Models

Authors: Divya Bajaj, Jose-Luis Castellanos, Ryan Knobel, Austin Luchsinger, Aiden Massie, Adrian Salinas, Pablo Santos, Ramiro Santos, Robert Schweller, and Tim Wylie

Published in: LIPIcs, Volume 359, 36th International Symposium on Algorithms and Computation (ISAAC 2025)

Abstract
The ability to detect whether a species (or dimension) is zero in Chemical Reaction Networks (CRN), Vector Addition Systems, or Petri Nets is known to increase the power of these models - making them capable of universal computation. While this ability may appear in many forms, such as extending the models to allow transitions to be inhibited, prioritized, or synchronized, we present an extension that directly performs this zero checking. We introduce a new void genesis CRN variant with a simple design that merely increments the count of a specific species when any other species' count goes to zero. As with previous extensions, we show that the model is Turing Universal. We then analyze several other studied CRN variants and show that they are all equivalent through a polynomial simulation with the void genesis model, which does not merely follow from Turing-universality. Thus, inhibitor species, reactions that occur at different rates, being allowed to run reactions in parallel, or even being allowed to continually add more volume to the CRN, does not add additional simulation power beyond simply detecting if a species count becomes zero.
Cite as

Divya Bajaj, Jose-Luis Castellanos, Ryan Knobel, Austin Luchsinger, Aiden Massie, Adrian Salinas, Pablo Santos, Ramiro Santos, Robert Schweller, and Tim Wylie. Polynomial Equivalence of Extended Chemical Reaction Models. In 36th International Symposium on Algorithms and Computation (ISAAC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 359, pp. 7:1-7:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{bajaj_et_al:LIPIcs.ISAAC.2025.7,
  author =	{Bajaj, Divya and Castellanos, Jose-Luis and Knobel, Ryan and Luchsinger, Austin and Massie, Aiden and Salinas, Adrian and Santos, Pablo and Santos, Ramiro and Schweller, Robert and Wylie, Tim},
  title =	{{Polynomial Equivalence of Extended Chemical Reaction Models}},
  booktitle =	{36th International Symposium on Algorithms and Computation (ISAAC 2025)},
  pages =	{7:1--7:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-408-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{359},
  editor =	{Chen, Ho-Lin and Hon, Wing-Kai and Tsai, Meng-Tsung},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2025.7},
  URN =		{urn:nbn:de:0030-drops-249158},
  doi =		{10.4230/LIPIcs.ISAAC.2025.7},
  annote =	{Keywords: Chemical Reaction Networks, Simulations, Petri-nets, Vector Addition Systems, Bi-simulation, Turing-universality, Inhibitors}
}
Document
DOI: 10.4230/OASIcs.SpaceCHI.2025.20
Navigating Exoplanetary Systems in Augmented Reality: Preliminary Insights on ExoAR

Authors: Bryson Lawton, Frank Maurer, and Daniel Zielasko

Published in: OASIcs, Volume 130, Advancing Human-Computer Interaction for Space Exploration (SpaceCHI 2025)

Abstract
With thousands of exoplanets now confirmed by space missions such as NASA’s Kepler and TESS, scientific interest and public curiosity about these distant worlds continue to grow. However, current visualization tools for exploring exoplanetary systems often lack sufficient scientific accuracy or interactive features, limiting their educational effectiveness and analytical utility. To help address this gap, we developed ExoAR, an augmented reality tool designed to offer immersive, scientifically sound visualizations of all known exoplanetary systems using data directly sourced from NASA’s Exoplanet Archive. By leveraging augmented reality’s strengths, ExoAR enables users to immerse themselves in interactive, dynamic 3D models of these planetary systems with data-driven representations of planets and their host stars. The application also allows users to adjust various visualization scales independently, a capability designed to aid comprehension of comparative astronomical properties such as orbital mechanics, planetary sizes, and stellar classifications. To begin assessing ExoAR’s potential as an educational and analytical tool and inform future iterations, a pilot user study was conducted. Its findings indicate that participants found ExoAR improved user engagement and spatial understanding compared to NASA’s Eyes on Exoplanets application, a non-immersive exoplanetary system visualization tool. This work-in-progress paper presents these early insights, acknowledges current system limitations, and outlines future directions for more rigorously evaluating and further improving ExoAR’s capabilities for both educational and scientific communities.
Cite as

Bryson Lawton, Frank Maurer, and Daniel Zielasko. Navigating Exoplanetary Systems in Augmented Reality: Preliminary Insights on ExoAR. In Advancing Human-Computer Interaction for Space Exploration (SpaceCHI 2025). Open Access Series in Informatics (OASIcs), Volume 130, pp. 20:1-20:13, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{lawton_et_al:OASIcs.SpaceCHI.2025.20,
  author =	{Lawton, Bryson and Maurer, Frank and Zielasko, Daniel},
  title =	{{Navigating Exoplanetary Systems in Augmented Reality: Preliminary Insights on ExoAR}},
  booktitle =	{Advancing Human-Computer Interaction for Space Exploration (SpaceCHI 2025)},
  pages =	{20:1--20:13},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-384-3},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{130},
  editor =	{Bensch, Leonie and Nilsson, Tommy and Nisser, Martin and Pataranutaporn, Pat and Schmidt, Albrecht and Sumini, Valentina},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.SpaceCHI.2025.20},
  URN =		{urn:nbn:de:0030-drops-240106},
  doi =		{10.4230/OASIcs.SpaceCHI.2025.20},
  annote =	{Keywords: Immersive Analytics, Data Visualization, Astronomy, Astrophysics, Exoplanet, Augmented Reality, AR}
}
Document
DOI: 10.4230/OASIcs.SpaceCHI.2025.21
Towards Passively Actuated Short-Range Telehaptics for Astronauts

Authors: Matvey Boguslavskiy, Digby Chappell, and Thrishantha Nanayakkara

Published in: OASIcs, Volume 130, Advancing Human-Computer Interaction for Space Exploration (SpaceCHI 2025)

Abstract
Human extra-vehicular activity (EVA) plays a vital role in current and near future space exploration for two reasons: the superior dexterity exhibited by human astronauts, and their flexible problem-solving and decision-making capabilities. However, the dexterity of astronauts during EVA is limited by the flexibility and tactility of their EVA suit gloves, which are primarily designed to provide thermal insulation and pressure for the hand. This creates a compromise between utility and protection. To address this compromise, a Passively Actuated Short-range Telehaptic (PAST) device is proposed. The PAST device couples the motion of fingers between a robotic hand and a human hand through a hydraulically actuated linkage. It also transfers tactile information, including pressure, direction of motion, and position of contact, via a taxel array. Results demonstrate that the proposed prototype PAST device surpasses an unpressurised benchmark heavy work glove (HWG) in tasks involving tactile position and motion direction identification. This provides evidence supporting the feasibility of enhancing astronaut dexterity during EVA through the use of PAST devices as an alternative paradigm to gloves.
Cite as

Matvey Boguslavskiy, Digby Chappell, and Thrishantha Nanayakkara. Towards Passively Actuated Short-Range Telehaptics for Astronauts. In Advancing Human-Computer Interaction for Space Exploration (SpaceCHI 2025). Open Access Series in Informatics (OASIcs), Volume 130, pp. 21:1-21:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{boguslavskiy_et_al:OASIcs.SpaceCHI.2025.21,
  author =	{Boguslavskiy, Matvey and Chappell, Digby and Nanayakkara, Thrishantha},
  title =	{{Towards Passively Actuated Short-Range Telehaptics for Astronauts}},
  booktitle =	{Advancing Human-Computer Interaction for Space Exploration (SpaceCHI 2025)},
  pages =	{21:1--21:16},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-384-3},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{130},
  editor =	{Bensch, Leonie and Nilsson, Tommy and Nisser, Martin and Pataranutaporn, Pat and Schmidt, Albrecht and Sumini, Valentina},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.SpaceCHI.2025.21},
  URN =		{urn:nbn:de:0030-drops-240115},
  doi =		{10.4230/OASIcs.SpaceCHI.2025.21},
  annote =	{Keywords: Extra-vehicular Activity, Mechanism Design, Haptics, Dexterity, Tactility}
}
Document
DOI: 10.4230/LIPIcs.DNA.31.3
Reachability in Deletion-Only Chemical Reaction Networks

Authors: Bin Fu, Timothy Gomez, Ryan Knobel, Austin Luchsinger, Aiden Massie, Marco Rodriguez, Adrian Salinas, Robert Schweller, and Tim Wylie

Published in: LIPIcs, Volume 347, 31st International Conference on DNA Computing and Molecular Programming (DNA 31) (2025)

Abstract
For general discrete Chemical Reaction Networks (CRNs), the fundamental problem of reachability - the question of whether a target configuration can be produced from a given initial configuration - was recently shown to be Ackermann-complete. However, many open questions remain about which features of the CRN model drive this complexity. We study a restricted class of CRNs with void rules, reactions that only decrease species counts. We further examine this regime in the motivated model of step CRNs, which allow additional species to be introduced in discrete stages. With and without steps, we characterize the complexity of the reachability problem for CRNs with void rules. We show that, without steps, reachability remains polynomial-time solvable for bimolecular systems but becomes NP-complete for larger reactions. Conversely, with just a single step, reachability becomes NP-complete even for bimolecular systems. Our results provide a nearly complete classification of void-rule reachability problems into tractable and intractable cases, with only a single exception.
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Bin Fu, Timothy Gomez, Ryan Knobel, Austin Luchsinger, Aiden Massie, Marco Rodriguez, Adrian Salinas, Robert Schweller, and Tim Wylie. Reachability in Deletion-Only Chemical Reaction Networks. In 31st International Conference on DNA Computing and Molecular Programming (DNA 31). Leibniz International Proceedings in Informatics (LIPIcs), Volume 347, pp. 3:1-3:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{fu_et_al:LIPIcs.DNA.31.3,
  author =	{Fu, Bin and Gomez, Timothy and Knobel, Ryan and Luchsinger, Austin and Massie, Aiden and Rodriguez, Marco and Salinas, Adrian and Schweller, Robert and Wylie, Tim},
  title =	{{Reachability in Deletion-Only Chemical Reaction Networks}},
  booktitle =	{31st International Conference on DNA Computing and Molecular Programming (DNA 31)},
  pages =	{3:1--3:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-399-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{347},
  editor =	{Schaeffer, Josie and Zhang, Fei},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.DNA.31.3},
  URN =		{urn:nbn:de:0030-drops-238521},
  doi =		{10.4230/LIPIcs.DNA.31.3},
  annote =	{Keywords: CRN, Chemical Reaction Network, Reachability, Void Reactions}
}
Document
DOI: 10.4230/LIPIcs.WABI.2025.10
DiVerG: Scalable Distance Index for Validation of Paired-End Alignments in Sequence Graphs

Authors: Ali Ghaffaari, Alexander Schönhuth, and Tobias Marschall

Published in: LIPIcs, Volume 344, 25th International Conference on Algorithms for Bioinformatics (WABI 2025)

Abstract
Determining the distance between two loci within a genomic region is a recurrent operation in various tasks in computational genomics. A notable example of this task arises in paired-end read mapping as a form of validation of distances between multiple alignments. While straightforward for a single genome, graph-based reference structures render the operation considerably more involved. Given the sheer number of such queries in a typical read mapping experiment, an efficient algorithm for answering distance queries is crucial. In this paper, we introduce DiVerG, a compact data structure as well as a fast and scalable algorithm, for constructing distance indexes for general sequence graphs on multi-core CPU and many-core GPU architectures. DiVerG is based on PairG [Jain et al., 2019], but overcomes the limitations of PairG by exploiting the extensive potential for improvements in terms of scalability and space efficiency. As a consequence, DiVerG can process substantially larger datasets, such as whole human genomes, which are unmanageable by PairG. DiVerG offers faster index construction time and consistently faster query time with gains proportional to the size of the underlying compact data structure. We demonstrate that our method performs favorably on multiple real datasets at various scales. DiVerG achieves superior performance over PairG; e.g. resulting to 2.5-4x speed-up in query time, 44-340x smaller index size, and 3-50x faster construction time for the genome graph of the MHC region, as a particularly variable region of the human genome. The implementation is available at: https://github.com/cartoonist/diverg
Cite as

Ali Ghaffaari, Alexander Schönhuth, and Tobias Marschall. DiVerG: Scalable Distance Index for Validation of Paired-End Alignments in Sequence Graphs. In 25th International Conference on Algorithms for Bioinformatics (WABI 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 344, pp. 10:1-10:24, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{ghaffaari_et_al:LIPIcs.WABI.2025.10,
  author =	{Ghaffaari, Ali and Sch\"{o}nhuth, Alexander and Marschall, Tobias},
  title =	{{DiVerG: Scalable Distance Index for Validation of Paired-End Alignments in Sequence Graphs}},
  booktitle =	{25th International Conference on Algorithms for Bioinformatics (WABI 2025)},
  pages =	{10:1--10:24},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-386-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{344},
  editor =	{Brejov\'{a}, Bro\v{n}a and Patro, Rob},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2025.10},
  URN =		{urn:nbn:de:0030-drops-239369},
  doi =		{10.4230/LIPIcs.WABI.2025.10},
  annote =	{Keywords: Sequence graph, distance index, read mapping, sparse matrix}
}
Document
DOI: 10.4230/LIPIcs.WABI.2025.11
Mutational Signature Refitting on Sparse Pan-Cancer Data

Authors: Gal Gilad, Teresa M. Przytycka, and Roded Sharan

Published in: LIPIcs, Volume 344, 25th International Conference on Algorithms for Bioinformatics (WABI 2025)

Abstract
Mutational processes shape cancer genomes, leaving characteristic marks that are termed signatures. The level of activity of each such process, or its signature exposure, provides important information on the disease, improving patient stratification and the prediction of drug response. Thus, there is growing interest in developing refitting methods that decipher those exposures. Previous work in this domain was unsupervised in nature, employing algebraic decomposition and probabilistic inference methods. Here we provide a supervised approach to the problem of signature refitting and show its superiority over current methods. Our method, SuRe, leverages a neural network model to capture correlations between signature exposures in real data. We show that SuRe outperforms previous methods on sparse mutation data from tumor type specific data sets, as well as pan-cancer data sets, with an increasing advantage as the data become sparser. We further demonstrate its utility in clinical settings.
Cite as

Gal Gilad, Teresa M. Przytycka, and Roded Sharan. Mutational Signature Refitting on Sparse Pan-Cancer Data. In 25th International Conference on Algorithms for Bioinformatics (WABI 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 344, pp. 11:1-11:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{gilad_et_al:LIPIcs.WABI.2025.11,
  author =	{Gilad, Gal and Przytycka, Teresa M. and Sharan, Roded},
  title =	{{Mutational Signature Refitting on Sparse Pan-Cancer Data}},
  booktitle =	{25th International Conference on Algorithms for Bioinformatics (WABI 2025)},
  pages =	{11:1--11:23},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-386-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{344},
  editor =	{Brejov\'{a}, Bro\v{n}a and Patro, Rob},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2025.11},
  URN =		{urn:nbn:de:0030-drops-239374},
  doi =		{10.4230/LIPIcs.WABI.2025.11},
  annote =	{Keywords: mutational signatures, signature refitting, cancer genomics, genomic data analysis, somatic mutations}
}
Document
DOI: 10.4230/LIPIcs.ECRTS.2025.17
Theoretical Foundations of Utility Accrual for Real-Time Systems

Authors: Jian-Jia Chen, Junjie Shi, Mario Günzel, Georg von der Brüggen, Kuan-Hsun Chen, and Peter Bella

Published in: LIPIcs, Volume 335, 37th Euromicro Conference on Real-Time Systems (ECRTS 2025)

Abstract
Providing guaranteed quantification of properties of soft real-time systems is important in practice to ensure that a system performs correctly most of the time. We study utility accrual for real-time systems, in which the utility of a real-time job is defined as a time utility function with respect to its response time. Essentially, we answer the fundamental questions: Does the utility accrual of a periodic real-time task in the long run converge to a single value? If yes, to which value? We first show that concrete problem instances exist where evaluating the utility accrual by simulating the scheduling algorithm or conducting scheduling experiments in a long run is erroneous. Afterwards, we show how to construct a Markov chain to model the interactions between the scheduling policy, the probabilistic workload of a periodic real-time task, the service provided by the system to serve the task, and the effect on the utility accrual. For such a Markov chain, we also provide the theoretical fundamentals to determine whether the utility accrual converges in the long run and the derivation of the utility accrual if it converges.
Cite as

Jian-Jia Chen, Junjie Shi, Mario Günzel, Georg von der Brüggen, Kuan-Hsun Chen, and Peter Bella. Theoretical Foundations of Utility Accrual for Real-Time Systems. In 37th Euromicro Conference on Real-Time Systems (ECRTS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 335, pp. 17:1-17:26, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{chen_et_al:LIPIcs.ECRTS.2025.17,
  author =	{Chen, Jian-Jia and Shi, Junjie and G\"{u}nzel, Mario and von der Br\"{u}ggen, Georg and Chen, Kuan-Hsun and Bella, Peter},
  title =	{{Theoretical Foundations of Utility Accrual for Real-Time Systems}},
  booktitle =	{37th Euromicro Conference on Real-Time Systems (ECRTS 2025)},
  pages =	{17:1--17:26},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-377-5},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{335},
  editor =	{Mancuso, Renato},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ECRTS.2025.17},
  URN =		{urn:nbn:de:0030-drops-235950},
  doi =		{10.4230/LIPIcs.ECRTS.2025.17},
  annote =	{Keywords: Soft Real-Time Systems, Utility Accrual, Markov Chains, Dismiss Points}
}
Document
DOI: 10.4230/LIPIcs.ECOOP.2025.36
Efficient Neural Network Verification via Order Leading Exploration of Branch-and-Bound Trees

Authors: Guanqin Zhang, Kota Fukuda, Zhenya Zhang, H.M.N. Dilum Bandara, Shiping Chen, Jianjun Zhao, and Yulei Sui

Published in: LIPIcs, Volume 333, 39th European Conference on Object-Oriented Programming (ECOOP 2025)

Abstract
The vulnerability of neural networks to adversarial perturbations has necessitated formal verification techniques that can rigorously certify the quality of neural networks. As the state-of-the-art, branch-and-bound (BaB) is a "divide-and-conquer" strategy that applies off-the-shelf verifiers to sub-problems for which they perform better. While BaB can identify the sub-problems that are necessary to be split, it explores the space of these sub-problems in a naive "first-come-first-served" manner, thereby suffering from an issue of inefficiency to reach a verification conclusion. To bridge this gap, we introduce an order over different sub-problems produced by BaB, concerning with their different likelihoods of containing counterexamples. Based on this order, we propose a novel verification framework Oliva that explores the sub-problem space by prioritizing those sub-problems that are more likely to find counterexamples, in order to efficiently reach the conclusion of the verification. Even if no counterexample can be found in any sub-problem, it only changes the order of visiting different sub-problems and so will not lead to a performance degradation. Specifically, Oliva has two variants, including Oliva^GR, a greedy strategy that always prioritizes the sub-problems that are more likely to find counterexamples, and Oliva^SA, a balanced strategy inspired by simulated annealing that gradually shifts from exploration to exploitation to locate the globally optimal sub-problems. We experimentally evaluate the performance of Oliva on 690 verification problems spanning over 5 models with datasets MNIST and CIFAR-10. Compared to the state-of-the-art approaches, we demonstrate the speedup of Oliva for up to 25× in MNIST, and up to 80× in CIFAR-10.
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Guanqin Zhang, Kota Fukuda, Zhenya Zhang, H.M.N. Dilum Bandara, Shiping Chen, Jianjun Zhao, and Yulei Sui. Efficient Neural Network Verification via Order Leading Exploration of Branch-and-Bound Trees. In 39th European Conference on Object-Oriented Programming (ECOOP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 333, pp. 36:1-36:29, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{zhang_et_al:LIPIcs.ECOOP.2025.36,
  author =	{Zhang, Guanqin and Fukuda, Kota and Zhang, Zhenya and Bandara, H.M.N. Dilum and Chen, Shiping and Zhao, Jianjun and Sui, Yulei},
  title =	{{Efficient Neural Network Verification via Order Leading Exploration of Branch-and-Bound Trees}},
  booktitle =	{39th European Conference on Object-Oriented Programming (ECOOP 2025)},
  pages =	{36:1--36:29},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-373-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{333},
  editor =	{Aldrich, Jonathan and Silva, Alexandra},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ECOOP.2025.36},
  URN =		{urn:nbn:de:0030-drops-233281},
  doi =		{10.4230/LIPIcs.ECOOP.2025.36},
  annote =	{Keywords: neural network verification, branch and bound, counterexample potentiality, simulated annealing, stochastic optimization}
}
Document
DOI: 10.4230/LIPIcs.ECOOP.2025.16
A Lightweight Method for Generating Multi-Tier JIT Compilation Virtual Machine in a Meta-Tracing Compiler Framework

Authors: Yusuke Izawa, Hidehiko Masuhara, and Carl Friedrich Bolz-Tereick

Published in: LIPIcs, Volume 333, 39th European Conference on Object-Oriented Programming (ECOOP 2025)

Abstract
Meta-compiler frameworks, such as RPython and Graal/Truffle, generate high-performance virtual machines (VMs) from interpreter definitions. Although they generate VMs with high-quality just-in-time (JIT) compilers, they still lack an important feature that dedicated VMs (i.e., VMs that are developed for specific languages) have, namely multi-tier compilation. Multi-tier compilation uses light-weight compilers at early stages and highly optimizing compilers at later stages in order to balance between compilation overheads and code quality. We propose a novel approach to enabling multi-tier compilation in the VMs generated by a meta-compiler framework. Instead of extending the JIT compiler backend of the framework, our approach drives an existing (heavyweight) compiler backend in the framework to quickly generate unoptimized native code by merely embedding directives and compile-time operations into interpreter definitions. As a validation of the approach, we developed 2SOM, a Simple Object Machine with a two-tier JIT compiler based on RPython. 2SOM first applies the tier-1 threaded code generator that is generated by our proposed technique, then, to the loops that exceed a threshold, applies the tier-2 tracing JIT compiler that is generated by the original RPython framework. Our performance evaluation that runs a program with a realistic workload showed that 2SOM improved, when compared against an RPython-based VM, warm-up performance by 15%, with merely a 5% reduction in peak performance.
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Yusuke Izawa, Hidehiko Masuhara, and Carl Friedrich Bolz-Tereick. A Lightweight Method for Generating Multi-Tier JIT Compilation Virtual Machine in a Meta-Tracing Compiler Framework. In 39th European Conference on Object-Oriented Programming (ECOOP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 333, pp. 16:1-16:29, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{izawa_et_al:LIPIcs.ECOOP.2025.16,
  author =	{Izawa, Yusuke and Masuhara, Hidehiko and Bolz-Tereick, Carl Friedrich},
  title =	{{A Lightweight Method for Generating Multi-Tier JIT Compilation Virtual Machine in a Meta-Tracing Compiler Framework}},
  booktitle =	{39th European Conference on Object-Oriented Programming (ECOOP 2025)},
  pages =	{16:1--16:29},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-373-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{333},
  editor =	{Aldrich, Jonathan and Silva, Alexandra},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ECOOP.2025.16},
  URN =		{urn:nbn:de:0030-drops-233090},
  doi =		{10.4230/LIPIcs.ECOOP.2025.16},
  annote =	{Keywords: virtual machine, JIT compiler, multi-tier JIT compiler, meta-tracing JIT compiler, RPython}
}
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