License: Creative Commons Attribution 3.0 Unported license (CC BY 3.0)
When quoting this document, please refer to the following
DOI: 10.4230/LIPIcs.ISAAC.2019.42
URN: urn:nbn:de:0030-drops-115382
URL: https://drops.dagstuhl.de/opus/volltexte/2019/11538/
Go to the corresponding LIPIcs Volume Portal


Bar-Noy, Amotz ; Böhnlein, Toni ; Lotker, Zvi ; Peleg, David ; Rawitz, Dror

The Generalized Microscopic Image Reconstruction Problem

pdf-format:
LIPIcs-ISAAC-2019-42.pdf (0.5 MB)


Abstract

This paper presents and studies a generalization of the microscopic image reconstruction problem (MIR) introduced by Frosini and Nivat [Andrea Frosini and Maurice Nivat, 2007; Nivat, 2002]. Consider a specimen for inspection, represented as a collection of points typically organized on a grid in the plane. Assume each point x has an associated physical value l_x, which we would like to determine. However, it might be that obtaining these values precisely (by a surgical probe) is difficult, risky, or impossible. The alternative is to employ aggregate measuring techniques (such as EM, CT, US or MRI), whereby each measurement is taken over a larger window, and the exact values at each point are subsequently extracted by computational methods.
In this paper we extend the MIR framework in a number of ways. First, we consider a generalized setting where the inspected object is represented by an arbitrary graph G, and the vector l in R^n assigns a value l_v to each node v. A probe centered at a vertex v will capture a window encompassing its entire neighborhood N[v], i.e., the outcome of a probe centered at v is P_v = sum_{w in N[v]} l_w. We give a criterion for the graphs for which the extended MIR problem can be solved by extracting the vector l from the collection of probes, P^- = {P_v | v in V}.
We then consider cases where such reconstruction is impossible (namely, graphs G for which the probe vector P is inconclusive, in the sense that there may be more than one vector l yielding P). Let us assume that surgical probes (whose outcome at vertex v is the exact value of l_v) are technically available to us (yet are expensive or risky, and must be used sparingly). We show that in such cases, it may still be possible to achieve reconstruction based on a combination of a collection of standard probes together with a suitable set of surgical probes. We aim at identifying the minimum number of surgical probes necessary for a unique reconstruction, depending on the graph topology. This is referred to as the Minimum Surgical Probing problem (MSP).
Besides providing a solution for the above problems for arbitrary graphs, we also explore the range of possible behaviors of the Minimum Surgical Probing problem by determining the number of surgical probes necessary in certain specific graph families, such as perfect k-ary trees, paths, cycles, grids, tori and tubes.

BibTeX - Entry

@InProceedings{barnoy_et_al:LIPIcs:2019:11538,
  author =	{Amotz Bar-Noy and Toni B{\"o}hnlein and Zvi Lotker and David Peleg and Dror Rawitz},
  title =	{{The Generalized Microscopic Image Reconstruction Problem}},
  booktitle =	{30th International Symposium on Algorithms and Computation (ISAAC 2019)},
  pages =	{42:1--42:15},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-130-6},
  ISSN =	{1868-8969},
  year =	{2019},
  volume =	{149},
  editor =	{Pinyan Lu and Guochuan Zhang},
  publisher =	{Schloss Dagstuhl--Leibniz-Zentrum fuer Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/opus/volltexte/2019/11538},
  URN =		{urn:nbn:de:0030-drops-115382},
  doi =		{10.4230/LIPIcs.ISAAC.2019.42},
  annote =	{Keywords: Discrete mathematics, Combinatorics, Reconstruction algorithm, Image reconstruction, Graph spectra, Grid graphs}
}

Keywords: Discrete mathematics, Combinatorics, Reconstruction algorithm, Image reconstruction, Graph spectra, Grid graphs
Collection: 30th International Symposium on Algorithms and Computation (ISAAC 2019)
Issue Date: 2019
Date of publication: 28.11.2019


DROPS-Home | Fulltext Search | Imprint | Privacy Published by LZI