GCB 2012 September 20-22, 2012,Jena, Germany

German Conference on Bioinformatics 2012



Sebastian Böcker and Franziska Hufsky and Kerstin Scheubert and Jana Schleicher and Stefan Schuster (Eds.)
ISBN 978-3-939897-44-6, OASICS Vol. 26 ISSN 2190-6807
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Authors
  • Alexandrov, Theodore
  • Baumbach, Jan
  • Böck, Matthias
  • Böcker, Sebastian
  • Chernyavsky, Ilya
  • D'Addario, Marianna
  • Elshamy, Samy
  • Esmaielbeiki, Reyhaneh
  • Gramzow, Lydia
  • Holzhütter, Hermann-Georg
  • Hoppe, Andreas
  • Horn, Fabian
  • Hufsky, Franziska
  • Koch, Ina
  • Kottenhagen, Nina
  • Kreutzer, Christoph
  • Kriege, Nils
  • Köster, Johannes
  • Ludwig, Marcus
  • Maass, Peter
  • May, Patrick
  • Nebel, Jean-Christophe
  • Nikolenko, Sergey I.
  • Pesch, Robert
  • Pohl, Martin
  • Rahmann, Sven
  • Röttger, Richard
  • Scheubert, Kerstin
  • Schleicher, Jana
  • Schuster, Stefan
  • Schäfer, Tim
  • Theißen, Günter
  • Vu, Thuy Duong
  • Wittkop, Tobias
  • Zimmer, Ralf
    		•

    		  
    Frontmatter, Table of Contents, Preface, Programm Committee, Supportes and Sponsors, Index of Authors
    Authors: Böcker, Sebastian ; Hufsky, Franziska ; Scheubert, Kerstin ; Schleicher, Jana ; Schuster, Stefan

    Abstract | Document (4,000 KB) | BibTeX

    ModeScore: A Method to Infer Changed Activity of Metabolic Function from Transcript Profiles
    Authors: Hoppe, Andreas ; Holzhütter, Hermann-Georg

    Abstract | Document (481 KB) | BibTeX

    Comparing Fragmentation Trees from Electron Impact Mass Spectra with Annotated Fragmentation Pathways
    Authors: Hufsky, Franziska ; Böcker, Sebastian

    Abstract | Document (495 KB) | BibTeX

    Finding Characteristic Substructures for Metabolite Classes
    Authors: Ludwig, Marcus ; Hufsky, Franziska ; Elshamy, Samy ; Böcker, Sebastian

    Abstract | Document (732 KB) | BibTeX

    A Two-Step Soft Segmentation Procedure for MALDI Imaging Mass Spectrometry Data
    Authors: Chernyavsky, Ilya ; Alexandrov, Theodore ; Maass, Peter ; Nikolenko, Sergey I.

    Abstract | Document (2,506 KB) | BibTeX

    Building and Documenting Workflows with Python-Based Snakemake
    Authors: Köster, Johannes ; Rahmann, Sven

    Abstract | Document (399 KB) | BibTeX

    Online Transitivity Clustering of Biological Data with Missing Values
    Authors: Röttger, Richard ; Kreutzer, Christoph ; Vu, Thuy Duong ; Wittkop, Tobias ; Baumbach, Jan

    Abstract | Document (643 KB) | BibTeX

    ConReg: Analysis and Visualization of Conserved Regulatory Networks in Eukaryotes
    Authors: Pesch, Robert ; Böck, Matthias ; Zimmer, Ralf

    Abstract | Document (643 KB) | BibTeX

    Designing q-Unique DNA Sequences with Integer Linear Programs and Euler Tours in De Bruijn Graphs
    Authors: D'Addario, Marianna ; Kriege, Nils ; Rahmann, Sven

    Abstract | Document (572 KB) | BibTeX

    Polyglutamine and Polyalanine Tracts Are Enriched in Transcription Factors of Plants
    Authors: Kottenhagen, Nina ; Gramzow, Lydia ; Horn, Fabian ; Pohl, Martin ; Theißen, Günter

    Abstract | Document (441 KB) | BibTeX

    Computation and Visualization of Protein Topology Graphs Including Ligand Information
    Authors: Schäfer, Tim ; May, Patrick ; Koch, Ina

    Abstract | Document (1,577 KB) | BibTeX

    Unbiased Protein Interface Prediction Based on Ligand Diversity Quantification
    Authors: Esmaielbeiki, Reyhaneh ; Nebel, Jean-Christophe

    Abstract | Document (2,680 KB) | BibTeX

    		  



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