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Documents authored by Cardelli, Luca


Document
Forward and Backward Bisimulations for Chemical Reaction Networks

Authors: Luca Cardelli, Mirco Tribastone, Max Tschaikowski, and Andrea Vandin

Published in: LIPIcs, Volume 42, 26th International Conference on Concurrency Theory (CONCUR 2015)


Abstract
We present two quantitative behavioral equivalences over species of a chemical reaction network (CRN) with semantics based on ordinary differential equations. Forward CRN bisimulation identifies a partition where each equivalence class represents the exact sum of the concentrations of the species belonging to that class. Backward CRN bisimulation relates species that have identical solutions at all time points when starting from the same initial conditions. Both notions can be checked using only CRN syntactical information, i.e., by inspection of the set of reactions. We provide a unified algorithm that computes the coarsest refinement up to our bisimulations in polynomial time. Further, we give algorithms to compute quotient CRNs induced by a bisimulation. As an application, we find significant reductions in a number of models of biological processes from the literature. In two cases we allow the analysis of benchmark models which would be otherwise intractable due to their memory requirements.

Cite as

Luca Cardelli, Mirco Tribastone, Max Tschaikowski, and Andrea Vandin. Forward and Backward Bisimulations for Chemical Reaction Networks. In 26th International Conference on Concurrency Theory (CONCUR 2015). Leibniz International Proceedings in Informatics (LIPIcs), Volume 42, pp. 226-239, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2015)


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@InProceedings{cardelli_et_al:LIPIcs.CONCUR.2015.226,
  author =	{Cardelli, Luca and Tribastone, Mirco and Tschaikowski, Max and Vandin, Andrea},
  title =	{{Forward and Backward Bisimulations for Chemical Reaction Networks}},
  booktitle =	{26th International Conference on Concurrency Theory (CONCUR 2015)},
  pages =	{226--239},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-939897-91-0},
  ISSN =	{1868-8969},
  year =	{2015},
  volume =	{42},
  editor =	{Aceto, Luca and de Frutos Escrig, David},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CONCUR.2015.226},
  URN =		{urn:nbn:de:0030-drops-53684},
  doi =		{10.4230/LIPIcs.CONCUR.2015.226},
  annote =	{Keywords: Chemical reaction networks, ordinary differential equations, bisimulation, partition refinement}
}
Document
Continuous Markovian Logic - From Complete Axiomatization to the Metric Space of Formulas

Authors: Luca Cardelli, Kim G. Larsen, and Radu Mardare

Published in: LIPIcs, Volume 12, Computer Science Logic (CSL'11) - 25th International Workshop/20th Annual Conference of the EACSL (2011)


Abstract
Continuous Markovian Logic (CML) is a multimodal logic that expresses quantitative and qualitative properties of continuous-space and continuous-time labelled Markov processes (CMPs). The modalities of CML approximate the rates of the exponentially distributed random variables that characterize the duration of the labeled transitions. In this paper we present a sound and complete Hilbert-style axiomatization of CML for the CMP-semantics and prove some metaproperties including the small model property. CML characterizes stochastic bisimulation and supports the definition of a quantified extension of satisfiability relation that measures the compatibility of a model and a property. Relying on the small model property, we prove that this measure can be approximated, within a given error, by using a distance between logical formulas.

Cite as

Luca Cardelli, Kim G. Larsen, and Radu Mardare. Continuous Markovian Logic - From Complete Axiomatization to the Metric Space of Formulas. In Computer Science Logic (CSL'11) - 25th International Workshop/20th Annual Conference of the EACSL. Leibniz International Proceedings in Informatics (LIPIcs), Volume 12, pp. 144-158, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2011)


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@InProceedings{cardelli_et_al:LIPIcs.CSL.2011.144,
  author =	{Cardelli, Luca and Larsen, Kim G. and Mardare, Radu},
  title =	{{Continuous Markovian Logic - From Complete Axiomatization to the Metric Space of Formulas}},
  booktitle =	{Computer Science Logic (CSL'11) - 25th International Workshop/20th Annual Conference of the EACSL},
  pages =	{144--158},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-939897-32-3},
  ISSN =	{1868-8969},
  year =	{2011},
  volume =	{12},
  editor =	{Bezem, Marc},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CSL.2011.144},
  URN =		{urn:nbn:de:0030-drops-32281},
  doi =		{10.4230/LIPIcs.CSL.2011.144},
  annote =	{Keywords: probabilistic logic, axiomatization, Markov processes, metric semantics}
}
Document
10271 Abstracts Collection – Verification over discrete-continuous boundaries

Authors: Bernd Becker, Luca Cardelli, Holger Hermanns, and Sofiene Tahar

Published in: Dagstuhl Seminar Proceedings, Volume 10271, Verification over discrete-continuous boundaries (2010)


Abstract
From 4 July 2010 to 9 July 2010, the Dagstuhl Seminar 10271 ``Verification over discrete-continuous boundaries'' was held in Schloss Dagstuhl~--~Leibniz Center for Informatics. During the seminar, several participants presented their current research, and ongoing work and open problems were discussed. Abstracts of the presentations given during the seminar as well as abstracts of seminar results and ideas are put together in this paper. The first section describes the seminar topics and goals in general. Links to extended abstracts or full papers are provided, if available.

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Bernd Becker, Luca Cardelli, Holger Hermanns, and Sofiene Tahar. 10271 Abstracts Collection – Verification over discrete-continuous boundaries. In Verification over discrete-continuous boundaries. Dagstuhl Seminar Proceedings, Volume 10271, pp. 1-19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2010)


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@InProceedings{becker_et_al:DagSemProc.10271.1,
  author =	{Becker, Bernd and Cardelli, Luca and Hermanns, Holger and Tahar, Sofiene},
  title =	{{10271 Abstracts Collection – Verification over discrete-continuous boundaries}},
  booktitle =	{Verification over discrete-continuous boundaries},
  pages =	{1--19},
  series =	{Dagstuhl Seminar Proceedings (DagSemProc)},
  ISSN =	{1862-4405},
  year =	{2010},
  volume =	{10271},
  editor =	{Bernd Becker and Luca Cardelli and Holger Hermanns and Sofiene Tahar},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DagSemProc.10271.1},
  URN =		{urn:nbn:de:0030-drops-27922},
  doi =		{10.4230/DagSemProc.10271.1},
  annote =	{Keywords: Formal verification, cyber-physical systems, analog circuits, theorem proving, systems biology, mean-field methods}
}
Document
The Semantic Challenge of Object-Oriented Programming (Dagstuhl Seminar 98261)

Authors: Luca Cardelli, Achim Jung, Peter O'Hearn, and Jens Palsberg

Published in: Dagstuhl Seminar Reports. Dagstuhl Seminar Reports, Volume 1 (2021)


Abstract

Cite as

Luca Cardelli, Achim Jung, Peter O'Hearn, and Jens Palsberg. The Semantic Challenge of Object-Oriented Programming (Dagstuhl Seminar 98261). Dagstuhl Seminar Report 216, pp. 1-14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (1999)


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@TechReport{cardelli_et_al:DagSemRep.216,
  author =	{Cardelli, Luca and Jung, Achim and O'Hearn, Peter and Palsberg, Jens},
  title =	{{The Semantic Challenge of Object-Oriented Programming (Dagstuhl Seminar 98261)}},
  pages =	{1--14},
  ISSN =	{1619-0203},
  year =	{1999},
  type = 	{Dagstuhl Seminar Report},
  number =	{216},
  institution =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DagSemRep.216},
  URN =		{urn:nbn:de:0030-drops-151022},
  doi =		{10.4230/DagSemRep.216},
}
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