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Documents authored by Gowda, Kishen N.

Document
Track A: Algorithms, Complexity and Games
DOI: 10.4230/LIPIcs.ICALP.2024.18
It’s Hard to HAC Average Linkage!

Authors: MohammadHossein Bateni, Laxman Dhulipala, Kishen N. Gowda, D. Ellis Hershkowitz, Rajesh Jayaram, and Jakub Łącki

Published in: LIPIcs, Volume 297, 51st International Colloquium on Automata, Languages, and Programming (ICALP 2024)

Abstract
Average linkage Hierarchical Agglomerative Clustering (HAC) is an extensively studied and applied method for hierarchical clustering. Recent applications to massive datasets have driven significant interest in near-linear-time and efficient parallel algorithms for average linkage HAC. We provide hardness results that rule out such algorithms. On the sequential side, we establish a runtime lower bound of n^{3/2-ε} on n node graphs for sequential combinatorial algorithms under standard fine-grained complexity assumptions. This essentially matches the best-known running time for average linkage HAC. On the parallel side, we prove that average linkage HAC likely cannot be parallelized even on simple graphs by showing that it is CC-hard on trees of diameter 4. On the possibility side, we demonstrate that average linkage HAC can be efficiently parallelized (i.e., it is in NC) on paths and can be solved in near-linear time when the height of the output cluster hierarchy is small.
Cite as

MohammadHossein Bateni, Laxman Dhulipala, Kishen N. Gowda, D. Ellis Hershkowitz, Rajesh Jayaram, and Jakub Łącki. It’s Hard to HAC Average Linkage!. In 51st International Colloquium on Automata, Languages, and Programming (ICALP 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 297, pp. 18:1-18:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@InProceedings{bateni_et_al:LIPIcs.ICALP.2024.18,
  author =	{Bateni, MohammadHossein and Dhulipala, Laxman and Gowda, Kishen N. and Hershkowitz, D. Ellis and Jayaram, Rajesh and {\L}\k{a}cki, Jakub},
  title =	{{It’s Hard to HAC Average Linkage!}},
  booktitle =	{51st International Colloquium on Automata, Languages, and Programming (ICALP 2024)},
  pages =	{18:1--18:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-322-5},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{297},
  editor =	{Bringmann, Karl and Grohe, Martin and Puppis, Gabriele and Svensson, Ola},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2024.18},
  URN =		{urn:nbn:de:0030-drops-201613},
  doi =		{10.4230/LIPIcs.ICALP.2024.18},
  annote =	{Keywords: Clustering, Hierarchical Graph Clustering, HAC, Fine-Grained Complexity, Parallel Algorithms, CC}
}
Document
DOI: 10.4230/LIPIcs.ISAAC.2020.34
Improved FPT Algorithms for Deletion to Forest-Like Structures

Authors: Kishen N. Gowda, Aditya Lonkar, Fahad Panolan, Vraj Patel, and Saket Saurabh

Published in: LIPIcs, Volume 181, 31st International Symposium on Algorithms and Computation (ISAAC 2020)

Abstract
The Feedback Vertex Set problem is undoubtedly one of the most well-studied problems in Parameterized Complexity. In this problem, given an undirected graph G and a non-negative integer k, the objective is to test whether there exists a subset S ⊆ V(G) of size at most k such that G-S is a forest. After a long line of improvement, recently, Li and Nederlof [SODA, 2020] designed a randomized algorithm for the problem running in time 𝒪^⋆(2.7^k). In the Parameterized Complexity literature, several problems around Feedback Vertex Set have been studied. Some of these include Independent Feedback Vertex Set (where the set S should be an independent set in G), Almost Forest Deletion and Pseudoforest Deletion. In Pseudoforest Deletion, each connected component in G-S has at most one cycle in it. However, in Almost Forest Deletion, the input is a graph G and non-negative integers k,𝓁 ∈ ℕ, and the objective is to test whether there exists a vertex subset S of size at most k, such that G-S is 𝓁 edges away from a forest. In this paper, using the methodology of Li and Nederlof [SODA, 2020], we obtain the current fastest algorithms for all these problems. In particular we obtain following randomized algorithms. 1) Independent Feedback Vertex Set can be solved in time 𝒪^⋆(2.7^k). 2) Pseudo Forest Deletion can be solved in time 𝒪^⋆(2.85^k). 3) Almost Forest Deletion can be solved in 𝒪^⋆(min{2.85^k ⋅ 8.54^𝓁, 2.7^k ⋅ 36.61^𝓁, 3^k ⋅ 1.78^𝓁}).
Cite as

Kishen N. Gowda, Aditya Lonkar, Fahad Panolan, Vraj Patel, and Saket Saurabh. Improved FPT Algorithms for Deletion to Forest-Like Structures. In 31st International Symposium on Algorithms and Computation (ISAAC 2020). Leibniz International Proceedings in Informatics (LIPIcs), Volume 181, pp. 34:1-34:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2020)

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@InProceedings{gowda_et_al:LIPIcs.ISAAC.2020.34,
  author =	{Gowda, Kishen N. and Lonkar, Aditya and Panolan, Fahad and Patel, Vraj and Saurabh, Saket},
  title =	{{Improved FPT Algorithms for Deletion to Forest-Like Structures}},
  booktitle =	{31st International Symposium on Algorithms and Computation (ISAAC 2020)},
  pages =	{34:1--34:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-173-3},
  ISSN =	{1868-8969},
  year =	{2020},
  volume =	{181},
  editor =	{Cao, Yixin and Cheng, Siu-Wing and Li, Minming},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2020.34},
  URN =		{urn:nbn:de:0030-drops-133781},
  doi =		{10.4230/LIPIcs.ISAAC.2020.34},
  annote =	{Keywords: Parameterized Complexity, Independent Feedback Vertex Set, PseudoForest, Almost Forest, Cut and Count, Treewidth}
}
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