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Documents authored by Guo, Peaker


Document
Sensitivity of Repetitiveness Measures to String Reversal

Authors: Hideo Bannai, Yuto Fujie, Peaker Guo, Shunsuke Inenaga, Yuto Nakashima, Simon J. Puglisi, and Cristian Urbina

Published in: LIPIcs, Volume 369, 37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026)


Abstract
We study the impact that string reversal can have on several repetitiveness measures. First, we exhibit an infinite family of strings where the number, r, of runs in the run-length encoding of the Burrows-Wheeler transform (BWT) can increase additively by Θ(n) when reversing the string. This substantially improves the known Ω(log n) lower-bound for the additive sensitivity of r and it is asymptotically tight. We generalize our result to other variants of the BWT, including the variant with an appended end-of-string symbol and the bijective BWT. We show that an analogous result holds for the size z of the Lempel-Ziv 77 (LZ) parsing of the text, and also for some of its variants, including the non-overlapping LZ parsing, and the LZ-end parsing. Moreover, we describe a family of strings for which the ratio z(w^R)/z(w) approaches 3 from below as |w| → ∞. We also show an asymptotically tight lower-bound of Θ(n) for the additive sensitivity of the size v of the smallest lexicographic parsing to string reversal. Finally, we show that the multiplicative sensitivity of v to reversing the string is Θ(log n), and this lower-bound is also tight. Overall, our results expose the limitations of repetitiveness measures that are widely used in practice, against string reversal - a simple and natural data transformation.

Cite as

Hideo Bannai, Yuto Fujie, Peaker Guo, Shunsuke Inenaga, Yuto Nakashima, Simon J. Puglisi, and Cristian Urbina. Sensitivity of Repetitiveness Measures to String Reversal. In 37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 369, pp. 17:1-17:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{bannai_et_al:LIPIcs.CPM.2026.17,
  author =	{Bannai, Hideo and Fujie, Yuto and Guo, Peaker and Inenaga, Shunsuke and Nakashima, Yuto and Puglisi, Simon J. and Urbina, Cristian},
  title =	{{Sensitivity of Repetitiveness Measures to String Reversal}},
  booktitle =	{37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026)},
  pages =	{17:1--17:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-420-8},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{369},
  editor =	{Bille, Philip and Prezza, Nicola},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2026.17},
  URN =		{urn:nbn:de:0030-drops-259434},
  doi =		{10.4230/LIPIcs.CPM.2026.17},
  annote =	{Keywords: String reversal, Repetitiveness measures, Burrows-Wheeler transform, Lempel-Ziv parsing, Lexicographic parsings}
}
Document
On Occurrence-Preserving Morphisms

Authors: Kaisei Kishi, Peaker Guo, Cristian Urbina, and Hideo Bannai

Published in: LIPIcs, Volume 369, 37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026)


Abstract
A morphism is a mapping that transforms words through letter-wise substitution, where each symbol is consistently replaced by a fixed word. In the field of combinatorics on words, one topic that has attracted considerable attention is the characterization of morphisms that preserve specific properties, such as overlap-freeness, square-freeness, lexicographic order, and primitivity. Continuing this direction, we initiate the study on occurrence-preserving morphisms, which address the following fundamental question: given a morphism ϕ, two words u and v, and k ≥ 1, under what conditions does the number of occurrences of u in v equal the number of occurrences of ϕ^k(u) in ϕ^k(v)? To answer this question, we introduce the notion of interference-free morphisms, examine their properties, and uncover a connection to recognizable morphisms. We then present a precise characterization of occurrence-preserving morphisms in terms of interference-freeness. As applications of our characterization, we first show that there exists a bijection between the starting positions of the occurrences of u in v and those of ϕ^k(u) in ϕ^k(v). We then apply the characterization to the Fibonacci and Thue-Morse words to identify their minimal unique substrings (MUSs). Finally, we exploit the connection between MUSs and net occurrences to simplify existing proofs on net occurrences in these words.

Cite as

Kaisei Kishi, Peaker Guo, Cristian Urbina, and Hideo Bannai. On Occurrence-Preserving Morphisms. In 37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 369, pp. 24:1-24:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{kishi_et_al:LIPIcs.CPM.2026.24,
  author =	{Kishi, Kaisei and Guo, Peaker and Urbina, Cristian and Bannai, Hideo},
  title =	{{On Occurrence-Preserving Morphisms}},
  booktitle =	{37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026)},
  pages =	{24:1--24:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-420-8},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{369},
  editor =	{Bille, Philip and Prezza, Nicola},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2026.24},
  URN =		{urn:nbn:de:0030-drops-259504},
  doi =		{10.4230/LIPIcs.CPM.2026.24},
  annote =	{Keywords: Property-preserving morphisms, interference-free morphisms, recognizable morphisms, injective morphisms, Fibonacci words, Thue-Morse words, minimal unique substrings (MUSs), net occurrences}
}
Document
The Smallest String Attractors of Fibonacci and Period-Doubling Words

Authors: Mutsunori Banbara, Hideo Bannai, Peaker Guo, Dominik Köppl, Takuya Mieno, and Yoshio Okamoto

Published in: LIPIcs, Volume 369, 37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026)


Abstract
A string attractor of a string T[1..|T|] is a set of positions Γ of T such that any substring w of T has an occurrence that crosses a position in Γ, i.e., there is a position i such that w = T[i..i+|w|-1] and the intersection [i,i+|w|-1]∩ Γ is nonempty. The size of the smallest string attractor of Fibonacci words is known to be 2. We completely characterize the set of all smallest string attractors of Fibonacci words, and show a recursive formula describing the 2^{n-4} + 2^{⌈n/2⌉ - 2} distinct position pairs that are the smallest string attractors of the nth Fibonacci word for n ≥ 7. Similarly, the size of the smallest string attractor of period-doubling words is known to be 2. We also completely characterize the set of all smallest string attractors of period-doubling words, and show a formula describing the two distinct position pairs that are the smallest string attractors of the nth period-doubling word for n ≥ 2. Our results show that strings with the same smallest attractor size can have a drastically different number of distinct smallest attractors.

Cite as

Mutsunori Banbara, Hideo Bannai, Peaker Guo, Dominik Köppl, Takuya Mieno, and Yoshio Okamoto. The Smallest String Attractors of Fibonacci and Period-Doubling Words. In 37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 369, pp. 33:1-33:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{banbara_et_al:LIPIcs.CPM.2026.33,
  author =	{Banbara, Mutsunori and Bannai, Hideo and Guo, Peaker and K\"{o}ppl, Dominik and Mieno, Takuya and Okamoto, Yoshio},
  title =	{{The Smallest String Attractors of Fibonacci and Period-Doubling Words}},
  booktitle =	{37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026)},
  pages =	{33:1--33:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-420-8},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{369},
  editor =	{Bille, Philip and Prezza, Nicola},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2026.33},
  URN =		{urn:nbn:de:0030-drops-259599},
  doi =		{10.4230/LIPIcs.CPM.2026.33},
  annote =	{Keywords: String attractors, Fibonacci words, Period-doubling words, Combinatorics on words}
}
Document
Net Occurrences in Fibonacci and Thue-Morse Words

Authors: Peaker Guo and Kaisei Kishi

Published in: LIPIcs, Volume 331, 36th Annual Symposium on Combinatorial Pattern Matching (CPM 2025)


Abstract
A net occurrence of a repeated string in a text is an occurrence with unique left and right extensions, and the net frequency of the string is the number of its net occurrences in the text. Originally introduced for applications in Natural Language Processing, net frequency has recently gained attention for its algorithmic aspects. Guo et al. [CPM 2024] and Ohlebusch et al. [SPIRE 2024] focus on its computation in the offline setting, while Guo et al. [SPIRE 2024], Inenaga [arXiv 2024], and Mieno and Inenaga [CPM 2025] tackle the online counterpart. Mieno and Inenaga also characterize net occurrences in terms of the minimal unique substrings of the text. Additionally, Guo et al. [CPM 2024] initiate the study of net occurrences in Fibonacci words to establish a lower bound on the asymptotic running time of algorithms. Although there has been notable progress in algorithmic developments and some initial combinatorial insights, the combinatorial aspects of net occurrences have yet to be thoroughly examined. In this work, we make two key contributions. First, we confirm the conjecture that each Fibonacci word contains exactly three net occurrences. Second, we show that each Thue-Morse word contains exactly nine net occurrences. To achieve these results, we introduce the notion of overlapping net occurrence cover, which narrows down the candidate net occurrences in any text. Furthermore, we provide a precise characterization of occurrences of Fibonacci and Thue-Morse words of smaller order, offering structural insights that may have independent interest and potential applications in algorithm analysis and combinatorial properties of these words.

Cite as

Peaker Guo and Kaisei Kishi. Net Occurrences in Fibonacci and Thue-Morse Words. In 36th Annual Symposium on Combinatorial Pattern Matching (CPM 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 331, pp. 16:1-16:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{guo_et_al:LIPIcs.CPM.2025.16,
  author =	{Guo, Peaker and Kishi, Kaisei},
  title =	{{Net Occurrences in Fibonacci and Thue-Morse Words}},
  booktitle =	{36th Annual Symposium on Combinatorial Pattern Matching (CPM 2025)},
  pages =	{16:1--16:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-369-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{331},
  editor =	{Bonizzoni, Paola and M\"{a}kinen, Veli},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2025.16},
  URN =		{urn:nbn:de:0030-drops-231107},
  doi =		{10.4230/LIPIcs.CPM.2025.16},
  annote =	{Keywords: Fibonacci words, Thue-Morse words, net occurrence, net frequency, factorization}
}
Document
Exploiting New Properties of String Net Frequency for Efficient Computation

Authors: Peaker Guo, Patrick Eades, Anthony Wirth, and Justin Zobel

Published in: LIPIcs, Volume 296, 35th Annual Symposium on Combinatorial Pattern Matching (CPM 2024)


Abstract
Knowing which strings in a massive text are significant - that is, which strings are common and distinct from other strings - is valuable for several applications, including text compression and tokenization. Frequency in itself is not helpful for significance, because the commonest strings are the shortest strings. A compelling alternative is net frequency, which has the property that strings with positive net frequency are of maximal length. However, net frequency remains relatively unexplored, and there is no prior art showing how to compute it efficiently. We first introduce a characteristic of net frequency that simplifies the original definition. With this, we study strings with positive net frequency in Fibonacci words. We then use our characteristic and solve two key problems related to net frequency. First, single-nf, how to compute the net frequency of a given string of length m, in an input text of length n over an alphabet size σ. Second, all-nf, given length-n input text, how to report every string of positive net frequency (and its net frequency). Our methods leverage suffix arrays, components of the Burrows-Wheeler transform, and solution to the coloured range listing problem. We show that, for both problems, our data structure has O(n) construction cost: with this structure, we solve single-nf in O(m + σ) time and all-nf in O(n) time. Experimentally, we find our method to be around 100 times faster than reasonable baselines for single-nf. For all-nf, our results show that, even with prior knowledge of the set of strings with positive net frequency, simply confirming that their net frequency is positive takes longer than with our purpose-designed method. All in all, we show that net frequency is a cogent method for identifying significant strings. We show how to calculate net frequency efficiently, and how to report efficiently the set of plausibly significant strings.

Cite as

Peaker Guo, Patrick Eades, Anthony Wirth, and Justin Zobel. Exploiting New Properties of String Net Frequency for Efficient Computation. In 35th Annual Symposium on Combinatorial Pattern Matching (CPM 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 296, pp. 16:1-16:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)


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@InProceedings{guo_et_al:LIPIcs.CPM.2024.16,
  author =	{Guo, Peaker and Eades, Patrick and Wirth, Anthony and Zobel, Justin},
  title =	{{Exploiting New Properties of String Net Frequency for Efficient Computation}},
  booktitle =	{35th Annual Symposium on Combinatorial Pattern Matching (CPM 2024)},
  pages =	{16:1--16:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-326-3},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{296},
  editor =	{Inenaga, Shunsuke and Puglisi, Simon J.},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2024.16},
  URN =		{urn:nbn:de:0030-drops-201265},
  doi =		{10.4230/LIPIcs.CPM.2024.16},
  annote =	{Keywords: Fibonacci words, suffix arrays, Burrows-Wheeler transform, LCP arrays, irreducible LCP values, coloured range listing}
}
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