Published in: LIPIcs, Volume 201, 21st International Workshop on Algorithms in Bioinformatics (WABI 2021)
Bertrand Marchand, Yann Ponty, and Laurent Bulteau. Tree Diet: Reducing the Treewidth to Unlock FPT Algorithms in RNA Bioinformatics. In 21st International Workshop on Algorithms in Bioinformatics (WABI 2021). Leibniz International Proceedings in Informatics (LIPIcs), Volume 201, pp. 7:1-7:23, Schloss Dagstuhl - Leibniz-Zentrum für Informatik (2021)
@InProceedings{marchand_et_al:LIPIcs.WABI.2021.7, author = {Marchand, Bertrand and Ponty, Yann and Bulteau, Laurent}, title = {{Tree Diet: Reducing the Treewidth to Unlock FPT Algorithms in RNA Bioinformatics}}, booktitle = {21st International Workshop on Algorithms in Bioinformatics (WABI 2021)}, pages = {7:1--7:23}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-200-6}, ISSN = {1868-8969}, year = {2021}, volume = {201}, editor = {Carbone, Alessandra and El-Kebir, Mohammed}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2021.7}, URN = {urn:nbn:de:0030-drops-143604}, doi = {10.4230/LIPIcs.WABI.2021.7}, annote = {Keywords: RNA, treewidth, FPT algorithms, RNA design, structure-sequence alignment} }
Published in: LIPIcs, Volume 115, 13th International Symposium on Parameterized and Exact Computation (IPEC 2018)
Julien Baste, Ignasi Sau, and Dimitrios M. Thilikos. A Complexity Dichotomy for Hitting Small Planar Minors Parameterized by Treewidth. In 13th International Symposium on Parameterized and Exact Computation (IPEC 2018). Leibniz International Proceedings in Informatics (LIPIcs), Volume 115, pp. 2:1-2:13, Schloss Dagstuhl - Leibniz-Zentrum für Informatik (2019)
@InProceedings{baste_et_al:LIPIcs.IPEC.2018.2, author = {Baste, Julien and Sau, Ignasi and Thilikos, Dimitrios M.}, title = {{A Complexity Dichotomy for Hitting Small Planar Minors Parameterized by Treewidth}}, booktitle = {13th International Symposium on Parameterized and Exact Computation (IPEC 2018)}, pages = {2:1--2:13}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-084-2}, ISSN = {1868-8969}, year = {2019}, volume = {115}, editor = {Paul, Christophe and Pilipczuk, Michal}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.IPEC.2018.2}, URN = {urn:nbn:de:0030-drops-102033}, doi = {10.4230/LIPIcs.IPEC.2018.2}, annote = {Keywords: parameterized complexity, graph minors, treewidth, hitting minors, topological minors, dynamic programming, Exponential Time Hypothesis} }
Published in: LIPIcs, Volume 89, 12th International Symposium on Parameterized and Exact Computation (IPEC 2017)
Julien Baste, Didem Gözüpek, Christophe Paul, Ignasi Sau, Mordechai Shalom, and Dimitrios M. Thilikos. Parameterized Complexity of Finding a Spanning Tree with Minimum Reload Cost Diameter. In 12th International Symposium on Parameterized and Exact Computation (IPEC 2017). Leibniz International Proceedings in Informatics (LIPIcs), Volume 89, pp. 3:1-3:12, Schloss Dagstuhl - Leibniz-Zentrum für Informatik (2018)
@InProceedings{baste_et_al:LIPIcs.IPEC.2017.3, author = {Baste, Julien and G\"{o}z\"{u}pek, Didem and Paul, Christophe and Sau, Ignasi and Shalom, Mordechai and Thilikos, Dimitrios M.}, title = {{Parameterized Complexity of Finding a Spanning Tree with Minimum Reload Cost Diameter}}, booktitle = {12th International Symposium on Parameterized and Exact Computation (IPEC 2017)}, pages = {3:1--3:12}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-051-4}, ISSN = {1868-8969}, year = {2018}, volume = {89}, editor = {Lokshtanov, Daniel and Nishimura, Naomi}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.IPEC.2017.3}, URN = {urn:nbn:de:0030-drops-85545}, doi = {10.4230/LIPIcs.IPEC.2017.3}, annote = {Keywords: reload cost problems, minimum diameter spanning tree, parameterized complexity, FPT algorithm, treewidth, dynamic programming} }
Published in: LIPIcs, Volume 89, 12th International Symposium on Parameterized and Exact Computation (IPEC 2017)
Julien Baste, Ignasi Sau, and Dimitrios M. Thilikos. Optimal Algorithms for Hitting (Topological) Minors on Graphs of Bounded Treewidth. In 12th International Symposium on Parameterized and Exact Computation (IPEC 2017). Leibniz International Proceedings in Informatics (LIPIcs), Volume 89, pp. 4:1-4:12, Schloss Dagstuhl - Leibniz-Zentrum für Informatik (2018)
@InProceedings{baste_et_al:LIPIcs.IPEC.2017.4, author = {Baste, Julien and Sau, Ignasi and Thilikos, Dimitrios M.}, title = {{Optimal Algorithms for Hitting (Topological) Minors on Graphs of Bounded Treewidth}}, booktitle = {12th International Symposium on Parameterized and Exact Computation (IPEC 2017)}, pages = {4:1--4:12}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-051-4}, ISSN = {1868-8969}, year = {2018}, volume = {89}, editor = {Lokshtanov, Daniel and Nishimura, Naomi}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.IPEC.2017.4}, URN = {urn:nbn:de:0030-drops-85556}, doi = {10.4230/LIPIcs.IPEC.2017.4}, annote = {Keywords: parameterized complexity, graph minors, treewidth, hitting minors, topological minors, dynamic programming, Exponential Time Hypothesis} }
Published in: LIPIcs, Volume 89, 12th International Symposium on Parameterized and Exact Computation (IPEC 2017)
Julien Baste and Dimitrios M. Thilikos. Contraction-Bidimensionality of Geometric Intersection Graphs. In 12th International Symposium on Parameterized and Exact Computation (IPEC 2017). Leibniz International Proceedings in Informatics (LIPIcs), Volume 89, pp. 5:1-5:13, Schloss Dagstuhl - Leibniz-Zentrum für Informatik (2018)
@InProceedings{baste_et_al:LIPIcs.IPEC.2017.5, author = {Baste, Julien and Thilikos, Dimitrios M.}, title = {{Contraction-Bidimensionality of Geometric Intersection Graphs}}, booktitle = {12th International Symposium on Parameterized and Exact Computation (IPEC 2017)}, pages = {5:1--5:13}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-051-4}, ISSN = {1868-8969}, year = {2018}, volume = {89}, editor = {Lokshtanov, Daniel and Nishimura, Naomi}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.IPEC.2017.5}, URN = {urn:nbn:de:0030-drops-85487}, doi = {10.4230/LIPIcs.IPEC.2017.5}, annote = {Keywords: Grid exlusion theorem, Bidimensionality, Geometric intersection graphs, String Graphs} }
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