Published in: LIPIcs, Volume 297, 51st International Colloquium on Automata, Languages, and Programming (ICALP 2024)
Panagiotis Charalampopoulos, Paweł Gawrychowski, and Samah Ghazawi. Optimal Bounds for Distinct Quartics. In 51st International Colloquium on Automata, Languages, and Programming (ICALP 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 297, pp. 39:1-39:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)
@InProceedings{charalampopoulos_et_al:LIPIcs.ICALP.2024.39, author = {Charalampopoulos, Panagiotis and Gawrychowski, Pawe{\l} and Ghazawi, Samah}, title = {{Optimal Bounds for Distinct Quartics}}, booktitle = {51st International Colloquium on Automata, Languages, and Programming (ICALP 2024)}, pages = {39:1--39:17}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-322-5}, ISSN = {1868-8969}, year = {2024}, volume = {297}, editor = {Bringmann, Karl and Grohe, Martin and Puppis, Gabriele and Svensson, Ola}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2024.39}, URN = {urn:nbn:de:0030-drops-201823}, doi = {10.4230/LIPIcs.ICALP.2024.39}, annote = {Keywords: 2D strings, quartics, repetitions, periodicity} }
Published in: LIPIcs, Volume 297, 51st International Colloquium on Automata, Languages, and Programming (ICALP 2024)
Itai Boneh, Shay Golan, Shay Mozes, and Oren Weimann. Õptimal Dynamic Time Warping on Run-Length Encoded Strings. In 51st International Colloquium on Automata, Languages, and Programming (ICALP 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 297, pp. 30:1-30:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)
@InProceedings{boneh_et_al:LIPIcs.ICALP.2024.30, author = {Boneh, Itai and Golan, Shay and Mozes, Shay and Weimann, Oren}, title = {{\~{O}ptimal Dynamic Time Warping on Run-Length Encoded Strings}}, booktitle = {51st International Colloquium on Automata, Languages, and Programming (ICALP 2024)}, pages = {30:1--30:17}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-322-5}, ISSN = {1868-8969}, year = {2024}, volume = {297}, editor = {Bringmann, Karl and Grohe, Martin and Puppis, Gabriele and Svensson, Ola}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2024.30}, URN = {urn:nbn:de:0030-drops-201730}, doi = {10.4230/LIPIcs.ICALP.2024.30}, annote = {Keywords: Dynamic time warping, Fr\'{e}chet distance, edit distance, run-length encoding} }
Published in: LIPIcs, Volume 259, 34th Annual Symposium on Combinatorial Pattern Matching (CPM 2023)
Paweł Gawrychowski, Garance Gourdel, Tatiana Starikovskaya, and Teresa Anna Steiner. Compressed Indexing for Consecutive Occurrences. In 34th Annual Symposium on Combinatorial Pattern Matching (CPM 2023). Leibniz International Proceedings in Informatics (LIPIcs), Volume 259, pp. 12:1-12:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)
@InProceedings{gawrychowski_et_al:LIPIcs.CPM.2023.12, author = {Gawrychowski, Pawe{\l} and Gourdel, Garance and Starikovskaya, Tatiana and Steiner, Teresa Anna}, title = {{Compressed Indexing for Consecutive Occurrences}}, booktitle = {34th Annual Symposium on Combinatorial Pattern Matching (CPM 2023)}, pages = {12:1--12:22}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-276-1}, ISSN = {1868-8969}, year = {2023}, volume = {259}, editor = {Bulteau, Laurent and Lipt\'{a}k, Zsuzsanna}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2023.12}, URN = {urn:nbn:de:0030-drops-179666}, doi = {10.4230/LIPIcs.CPM.2023.12}, annote = {Keywords: Compressed indexing, two patterns, consecutive occurrences} }
Published in: LIPIcs, Volume 201, 21st International Workshop on Algorithms in Bioinformatics (WABI 2021)
Travis Gagie, Garance Gourdel, and Giovanni Manzini. Compressing and Indexing Aligned Readsets. In 21st International Workshop on Algorithms in Bioinformatics (WABI 2021). Leibniz International Proceedings in Informatics (LIPIcs), Volume 201, pp. 13:1-13:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2021)
@InProceedings{gagie_et_al:LIPIcs.WABI.2021.13, author = {Gagie, Travis and Gourdel, Garance and Manzini, Giovanni}, title = {{Compressing and Indexing Aligned Readsets}}, booktitle = {21st International Workshop on Algorithms in Bioinformatics (WABI 2021)}, pages = {13:1--13:21}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-200-6}, ISSN = {1868-8969}, year = {2021}, volume = {201}, editor = {Carbone, Alessandra and El-Kebir, Mohammed}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2021.13}, URN = {urn:nbn:de:0030-drops-143660}, doi = {10.4230/LIPIcs.WABI.2021.13}, annote = {Keywords: data compression, compact data structures, FM-index, Burrows-Wheeler Transform, EBWT, XBWT, DNA reads} }
Published in: LIPIcs, Volume 161, 31st Annual Symposium on Combinatorial Pattern Matching (CPM 2020)
Garance Gourdel, Tomasz Kociumaka, Jakub Radoszewski, and Tatiana Starikovskaya. Approximating Longest Common Substring with k mismatches: Theory and Practice. In 31st Annual Symposium on Combinatorial Pattern Matching (CPM 2020). Leibniz International Proceedings in Informatics (LIPIcs), Volume 161, pp. 16:1-16:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2020)
@InProceedings{gourdel_et_al:LIPIcs.CPM.2020.16, author = {Gourdel, Garance and Kociumaka, Tomasz and Radoszewski, Jakub and Starikovskaya, Tatiana}, title = {{Approximating Longest Common Substring with k mismatches: Theory and Practice}}, booktitle = {31st Annual Symposium on Combinatorial Pattern Matching (CPM 2020)}, pages = {16:1--16:15}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-149-8}, ISSN = {1868-8969}, year = {2020}, volume = {161}, editor = {G{\o}rtz, Inge Li and Weimann, Oren}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2020.16}, URN = {urn:nbn:de:0030-drops-121410}, doi = {10.4230/LIPIcs.CPM.2020.16}, annote = {Keywords: approximation algorithms, string similarity, LSH, conditional lower bounds} }
Published in: LIPIcs, Volume 96, 35th Symposium on Theoretical Aspects of Computer Science (STACS 2018)
Garance Gourdel, Tomasz Kociumaka, Jakub Radoszewski, Wojciech Rytter, Arseny Shur, and Tomasz Walen. String Periods in the Order-Preserving Model. In 35th Symposium on Theoretical Aspects of Computer Science (STACS 2018). Leibniz International Proceedings in Informatics (LIPIcs), Volume 96, pp. 38:1-38:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2018)
@InProceedings{gourdel_et_al:LIPIcs.STACS.2018.38, author = {Gourdel, Garance and Kociumaka, Tomasz and Radoszewski, Jakub and Rytter, Wojciech and Shur, Arseny and Walen, Tomasz}, title = {{String Periods in the Order-Preserving Model}}, booktitle = {35th Symposium on Theoretical Aspects of Computer Science (STACS 2018)}, pages = {38:1--38:16}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-062-0}, ISSN = {1868-8969}, year = {2018}, volume = {96}, editor = {Niedermeier, Rolf and Vall\'{e}e, Brigitte}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2018.38}, URN = {urn:nbn:de:0030-drops-85064}, doi = {10.4230/LIPIcs.STACS.2018.38}, annote = {Keywords: order-preserving pattern matching, period, efficient algorithm} }