5 Search Results for "Schmidt, Johannes"

Document
DOI: 10.4230/OASIcs.WCET.2024.2
The Platin Multi-Target Worst-Case Analysis Tool

Authors: Emad Jacob Maroun, Eva Dengler, Christian Dietrich, Stefan Hepp, Henriette Herzog, Benedikt Huber, Jens Knoop, Daniel Wiltsche-Prokesch, Peter Puschner, Phillip Raffeck, Martin Schoeberl, Simon Schuster, and Peter Wägemann

Published in: OASIcs, Volume 121, 22nd International Workshop on Worst-Case Execution Time Analysis (WCET 2024)

Abstract
With the increasing number of applications that require reliable runtime guarantees, the relevance of static worst-case analysis tools that can provide such guarantees increases. These analysis tools determine resource-consumption bounds of application tasks, with a model of the underlying hardware, to meet given resource budgets during runtime, such as deadlines of real-time tasks. This paper presents enhancements to the Platin worst-case analysis tool developed since its original release more than ten years ago. These novelties comprise Platin’s support for new architectures (i.e., ARMv6-M, RISC-V, and AVR) in addition to the previous backends for Patmos and ARMv7-M. Further, Platin now features system-wide analysis methods and annotation support to express system-level constraints. Besides an overview of these enhancements, we evaluate Platin’s accuracy for the two supported architecture implementations, Patmos and RISC-V.
Cite as

Emad Jacob Maroun, Eva Dengler, Christian Dietrich, Stefan Hepp, Henriette Herzog, Benedikt Huber, Jens Knoop, Daniel Wiltsche-Prokesch, Peter Puschner, Phillip Raffeck, Martin Schoeberl, Simon Schuster, and Peter Wägemann. The Platin Multi-Target Worst-Case Analysis Tool. In 22nd International Workshop on Worst-Case Execution Time Analysis (WCET 2024). Open Access Series in Informatics (OASIcs), Volume 121, pp. 2:1-2:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@InProceedings{maroun_et_al:OASIcs.WCET.2024.2,
  author =	{Maroun, Emad Jacob and Dengler, Eva and Dietrich, Christian and Hepp, Stefan and Herzog, Henriette and Huber, Benedikt and Knoop, Jens and Wiltsche-Prokesch, Daniel and Puschner, Peter and Raffeck, Phillip and Schoeberl, Martin and Schuster, Simon and W\"{a}gemann, Peter},
  title =	{{The Platin Multi-Target Worst-Case Analysis Tool}},
  booktitle =	{22nd International Workshop on Worst-Case Execution Time Analysis (WCET 2024)},
  pages =	{2:1--2:14},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-346-1},
  ISSN =	{2190-6807},
  year =	{2024},
  volume =	{121},
  editor =	{Carle, Thomas},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.WCET.2024.2},
  URN =		{urn:nbn:de:0030-drops-204704},
  doi =		{10.4230/OASIcs.WCET.2024.2},
  annote =	{Keywords: worst-case resource consumption, WCET, static analysis tool}
}
Document
DOI: 10.4230/LIPIcs.SEA.2024.17
Barcode Selection and Layout Optimization in Spatial Transcriptomics

Authors: Frederik L. Jatzkowski, Antonia Schmidt, Robert Mank, Steffen Schüler, and Matthias Müller-Hannemann

Published in: LIPIcs, Volume 301, 22nd International Symposium on Experimental Algorithms (SEA 2024)

Abstract
An important special case of the quadratic assignment problem arises in the synthesis of DNA microarrays for high-resolution spatial transcriptomics. The task is to select a suitable subset from a set of barcodes, i. e. short DNA strings that serve as unique identifiers, and to assign the selected barcodes to positions on a two-dimensional array in such a way that a position-dependent cost function is minimized. A typical microarray with dimensions of 768×1024 requires 786,432 many barcodes to be placed, leading to very challenging large-scale combinatorial optimization problems. The general quadratic assignment problem is well-known for its hardness, both in theory and in practice. It turns out that this also holds for the special case of the barcode layout problem. We show that the problem is even hard to approximate: It is MaxSNP-hard. An ILP formulation theoretically allows the computation of optimal results, but it is only applicable for tiny instances. Therefore, we have developed layout constructing and improving heuristics with the aim of computing near-optimal solutions for instances of realistic size. These include a sorting-based algorithm, a greedy algorithm, 2-OPT-based local search and a genetic algorithm. To assess the quality of the results, we compare the generated solutions with the expected cost of a random layout and with lower bounds. A combination of the greedy algorithm and 2-OPT local search produces the most promising results in terms of both quality and runtime. Solutions to large-scale instances with arrays of dimension 768×1024 show a 37% reduction in cost over a random solution and can be computed in about 3 minutes. Since the universe of suitable barcodes is much larger than the number of barcodes needed, this can be exploited. Experiments with different surpluses of barcodes show that a significant improvement in layout quality can be achieved at the cost of a reasonable increase in runtime. Another interesting finding is that the restriction of the barcode design space by biochemical constraints is actually beneficial for the overall layout cost.
Cite as

Frederik L. Jatzkowski, Antonia Schmidt, Robert Mank, Steffen Schüler, and Matthias Müller-Hannemann. Barcode Selection and Layout Optimization in Spatial Transcriptomics. In 22nd International Symposium on Experimental Algorithms (SEA 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 301, pp. 17:1-17:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@InProceedings{jatzkowski_et_al:LIPIcs.SEA.2024.17,
  author =	{Jatzkowski, Frederik L. and Schmidt, Antonia and Mank, Robert and Sch\"{u}ler, Steffen and M\"{u}ller-Hannemann, Matthias},
  title =	{{Barcode Selection and Layout Optimization in Spatial Transcriptomics}},
  booktitle =	{22nd International Symposium on Experimental Algorithms (SEA 2024)},
  pages =	{17:1--17:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-325-6},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{301},
  editor =	{Liberti, Leo},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SEA.2024.17},
  URN =		{urn:nbn:de:0030-drops-203821},
  doi =		{10.4230/LIPIcs.SEA.2024.17},
  annote =	{Keywords: Spatial Transcriptomics, Array Layout, Optimization, Computational Complexity, GPU Computing, Integer Linear Programming, Metaheuristics}
}
Document
DOI: 10.4230/LIPIcs.ECRTS.2024.10
Crêpe: Clock-Reconfiguration-Aware Preemption Control in Real-Time Systems with Devices

Authors: Eva Dengler and Peter Wägemann

Published in: LIPIcs, Volume 298, 36th Euromicro Conference on Real-Time Systems (ECRTS 2024)

Abstract
The domain of energy-constrained real-time systems that are operated on modern embedded system-on-chip (SoC) platforms brings numerous novel challenges for optimal resource minimization. These modern hardware platforms offer a heterogeneous variety of features to configure the tradeoff between temporal performance and energy efficiency, which goes beyond the state-of-the-art of existing dynamic-voltage-frequency-scaling (DVFS) scheduling schemes. The control center for configuring this tradeoff on platforms are complex clock subsystems that are intertwined with requirements of the SoC’s components (e.g., transceiver/memory/sensor devices). That is, several devices have precedence constraints with respect to specific clock sources and their settings. The challenge of dynamically adapting the various clock sources to select resource-optimal configurations becomes especially challenging in the presence of asynchronous preemptions, which are inherent to systems that use devices. In this paper, we present Crêpe, an approach to clock-reconfiguration-aware preemption control: Crêpe has an understanding of the target platform’s clock subsystem, its sleep states, and penalties to reconfigure clock sources for adapting clock frequencies. Crêpe’s hardware model is combined with an awareness of the application’s device requirements for each executed task, as well as possible interrupts that cause preemptions during runtime. Using these software/hardware constraints, Crêpe employs, in its offline phase, a mathematical formalization in order to select energy-minimal configurations while meeting given deadlines. This optimizing formalization, processed by standard mathematical solver tools, accounts for potentially occurring interrupts and the respective clock reconfigurations, which are then forwarded as alternative schedules to Crêpe’s runtime system. During runtime, the dispatcher assesses these offline-determined alternative schedules and reconfigures the clock sources for energy minimization. We developed an implementation based on a widely-used SoC platform (i.e., ESP32-C3) and an automated testbed for comprehensive energy-consumption evaluations to validate Crêpe’s claim of selecting resource-optimal settings under worst-case considerations.
Cite as

Eva Dengler and Peter Wägemann. Crêpe: Clock-Reconfiguration-Aware Preemption Control in Real-Time Systems with Devices. In 36th Euromicro Conference on Real-Time Systems (ECRTS 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 298, pp. 10:1-10:25, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@InProceedings{dengler_et_al:LIPIcs.ECRTS.2024.10,
  author =	{Dengler, Eva and W\"{a}gemann, Peter},
  title =	{{Cr\^{e}pe: Clock-Reconfiguration-Aware Preemption Control in Real-Time Systems with Devices}},
  booktitle =	{36th Euromicro Conference on Real-Time Systems (ECRTS 2024)},
  pages =	{10:1--10:25},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-324-9},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{298},
  editor =	{Pellizzoni, Rodolfo},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ECRTS.2024.10},
  URN =		{urn:nbn:de:0030-drops-203135},
  doi =		{10.4230/LIPIcs.ECRTS.2024.10},
  annote =	{Keywords: energy-constrained real-time systems, time/energy tradeoff, system-on-chip, energy-aware real-time scheduling, resource minimization, preemption control, worst-case energy consumption (WCEC), worst-case execution time (WCET), static whole-system analysis}
}
Document
DOI: 10.4230/DagMan.10.1.1
Current and Future Challenges in Knowledge Representation and Reasoning (Dagstuhl Perspectives Workshop 22282)

Authors: James P. Delgrande, Birte Glimm, Thomas Meyer, Miroslaw Truszczynski, and Frank Wolter

Published in: Dagstuhl Manifestos, Volume 10, Issue 1 (2024)

Abstract
Knowledge Representation and Reasoning is a central, longstanding, and active area of Artificial Intelligence. Over the years it has evolved significantly; more recently it has been challenged and complemented by research in areas such as machine learning and reasoning under uncertainty. In July 2022,sser a Dagstuhl Perspectives workshop was held on Knowledge Representation and Reasoning. The goal of the workshop was to describe the state of the art in the field, including its relation with other areas, its shortcomings and strengths, together with recommendations for future progress. We developed this manifesto based on the presentations, panels, working groups, and discussions that took place at the Dagstuhl Workshop. It is a declaration of our views on Knowledge Representation: its origins, goals, milestones, and current foci; its relation to other disciplines, especially to Artificial Intelligence; and on its challenges, along with key priorities for the next decade.
Cite as

James P. Delgrande, Birte Glimm, Thomas Meyer, Miroslaw Truszczynski, and Frank Wolter. Current and Future Challenges in Knowledge Representation and Reasoning (Dagstuhl Perspectives Workshop 22282). In Dagstuhl Manifestos, Volume 10, Issue 1, pp. 1-61, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@Article{delgrande_et_al:DagMan.10.1.1,
  author =	{Delgrande, James P. and Glimm, Birte and Meyer, Thomas and Truszczynski, Miroslaw and Wolter, Frank},
  title =	{{Current and Future Challenges in Knowledge Representation and Reasoning (Dagstuhl Perspectives Workshop 22282)}},
  pages =	{1--61},
  journal =	{Dagstuhl Manifestos},
  ISSN =	{2193-2433},
  year =	{2024},
  volume =	{10},
  number =	{1},
  editor =	{Delgrande, James P. and Glimm, Birte and Meyer, Thomas and Truszczynski, Miroslaw and Wolter, Frank},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DagMan.10.1.1},
  URN =		{urn:nbn:de:0030-drops-201403},
  doi =		{10.4230/DagMan.10.1.1},
  annote =	{Keywords: Knowledge representation and reasoning, Applications of logics, Declarative representations, Formal logic}
}
Document
DOI: 10.4230/LIPIcs.CSL.2013.615
The Complexity of Abduction for Equality Constraint Languages

Authors: Johannes Schmidt and Michał Wrona

Published in: LIPIcs, Volume 23, Computer Science Logic 2013 (CSL 2013)

Abstract
Abduction is a form of nonmonotonic reasoning that looks for an explanation for an observed manifestation according to some knowledge base. One form of the abduction problem studied in the literature is the propositional abduction problem parameterized by a structure \Gamma over the two-element domain. In that case, the knowledge base is a set of constraints over \Gamma, the manifestation and explanation are propositional formulas. In this paper, we follow a similar route. Yet, we consider abduction over infinite domain. We study the equality abduction problem parameterized by a relational first-order structure \Gamma over the natural numbers such that every relation in \Gamma is definable by a Boolean combination of equalities, a manifestation is a literal of the form (x = y) or (x != y), and an explanation is a set of such literals. Our main contribution is a complete complexity characterization of the equality abduction problem. We prove that depending on \Gamma, it is \Sigma^P_2-complete, or NP-complete, or in P.
Cite as

Johannes Schmidt and Michał Wrona. The Complexity of Abduction for Equality Constraint Languages. In Computer Science Logic 2013 (CSL 2013). Leibniz International Proceedings in Informatics (LIPIcs), Volume 23, pp. 615-633, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2013)

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@InProceedings{schmidt_et_al:LIPIcs.CSL.2013.615,
  author =	{Schmidt, Johannes and Wrona, Micha{\l}},
  title =	{{The Complexity of Abduction for Equality Constraint Languages}},
  booktitle =	{Computer Science Logic 2013 (CSL 2013)},
  pages =	{615--633},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-939897-60-6},
  ISSN =	{1868-8969},
  year =	{2013},
  volume =	{23},
  editor =	{Ronchi Della Rocca, Simona},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CSL.2013.615},
  URN =		{urn:nbn:de:0030-drops-42229},
  doi =		{10.4230/LIPIcs.CSL.2013.615},
  annote =	{Keywords: Abduction, infinite structures, equality constraint languages, computational complexity, algebraic approach}
}
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