3 Search Results for "Han, Yo-Sub"

Document
DOI: 10.4230/LIPIcs.CPM.2025.26
Extending the Burrows-Wheeler Transform for Cartesian Tree Matching and Constructing It

Authors: Eric M. Osterkamp and Dominik Köppl

Published in: LIPIcs, Volume 331, 36th Annual Symposium on Combinatorial Pattern Matching (CPM 2025)

Abstract
Cartesian tree matching is a form of generalized pattern matching where a substring of the text matches with the pattern if they share the same Cartesian tree. This form of matching finds application for time series of stock prices and can be of interest for melody matching between musical scores. For the indexing problem, the state-of-the-art data structure is a Burrows-Wheeler transform based solution due to [Kim and Cho, CPM'21], which uses nearly succinct space and can count the number of substrings that Cartesian tree match with a pattern in time linear in the pattern length. The authors address the construction of their data structure with a straight-forward solution that, however, requires pointer-based data structures, resulting in O(n lg n) bits of space, where n is the text length [Kim and Cho, CPM'21, Section A.4]. We address this bottleneck by a construction that requires O(n lg σ) bits of space and has a time complexity of O(n (lg σ lg n)/(lg lg n)), where σ is alphabet size. Additionally, we can extend this index for indexing multiple circular texts in the spirit of the extended Burrows-Wheeler transform without sacrificing the time and space complexities. We present this index in a dynamic variant, where we pay a logarithmic slowdown and need space linear in the input texts in bits for the extra functionality that we can incrementally add texts. Our extended setting is of interest for finding repetitive motifs common in the aforementioned applications, independent of offsets and scaling.
Cite as

Eric M. Osterkamp and Dominik Köppl. Extending the Burrows-Wheeler Transform for Cartesian Tree Matching and Constructing It. In 36th Annual Symposium on Combinatorial Pattern Matching (CPM 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 331, pp. 26:1-26:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{osterkamp_et_al:LIPIcs.CPM.2025.26,
  author =	{Osterkamp, Eric M. and K\"{o}ppl, Dominik},
  title =	{{Extending the Burrows-Wheeler Transform for Cartesian Tree Matching and Constructing It}},
  booktitle =	{36th Annual Symposium on Combinatorial Pattern Matching (CPM 2025)},
  pages =	{26:1--26:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-369-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{331},
  editor =	{Bonizzoni, Paola and M\"{a}kinen, Veli},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2025.26},
  URN =		{urn:nbn:de:0030-drops-231201},
  doi =		{10.4230/LIPIcs.CPM.2025.26},
  annote =	{Keywords: Cartesian tree matching, extended Burrows-Wheeler transform, construction algorithm, generalized pattern matching}
}
Document
DOI: 10.4230/LIPIcs.ISAAC.2022.60
Simon’s Congruence Pattern Matching

Authors: Sungmin Kim, Sang-Ki Ko, and Yo-Sub Han

Published in: LIPIcs, Volume 248, 33rd International Symposium on Algorithms and Computation (ISAAC 2022)

Abstract
Testing Simon’s congruence asks whether two strings have the same set of subsequences of length no greater than a given integer. In the light of the recent discovery of an optimal linear algorithm for testing Simon’s congruence, we solve the Simon’s congruence pattern matching problem. The problem requires finding all substrings of a text that are congruent to a pattern under the Simon’s congruence. Our algorithm efficiently solves the problem in linear time in the length of the text by reusing results from previous computations with the help of new data structures called X-trees and Y-trees. Moreover, we define and solve variants of the Simon’s congruence pattern matching problem. They require finding the longest and shortest substring of the text as well as the shortest subsequence of the text which is congruent to the pattern under the Simon’s congruence. Two more variants which ask for the longest congruent subsequence of the text and optimizing the pattern matching problem are left as open problems.
Cite as

Sungmin Kim, Sang-Ki Ko, and Yo-Sub Han. Simon’s Congruence Pattern Matching. In 33rd International Symposium on Algorithms and Computation (ISAAC 2022). Leibniz International Proceedings in Informatics (LIPIcs), Volume 248, pp. 60:1-60:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2022)

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@InProceedings{kim_et_al:LIPIcs.ISAAC.2022.60,
  author =	{Kim, Sungmin and Ko, Sang-Ki and Han, Yo-Sub},
  title =	{{Simon’s Congruence Pattern Matching}},
  booktitle =	{33rd International Symposium on Algorithms and Computation (ISAAC 2022)},
  pages =	{60:1--60:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-258-7},
  ISSN =	{1868-8969},
  year =	{2022},
  volume =	{248},
  editor =	{Bae, Sang Won and Park, Heejin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2022.60},
  URN =		{urn:nbn:de:0030-drops-173456},
  doi =		{10.4230/LIPIcs.ISAAC.2022.60},
  annote =	{Keywords: pattern matching, Simon’s congruence, string algorithm, data structure}
}
Document
DOI: 10.4230/LIPIcs.ECOOP.2021.11
Do Bugs Propagate? An Empirical Analysis of Temporal Correlations Among Software Bugs

Authors: Xiaodong Gu, Yo-Sub Han, Sunghun Kim, and Hongyu Zhang

Published in: LIPIcs, Volume 194, 35th European Conference on Object-Oriented Programming (ECOOP 2021)

Abstract
The occurrences of bugs are not isolated events, rather they may interact, affect each other, and trigger other latent bugs. Identifying and understanding bug correlations could help developers localize bug origins, predict potential bugs, and design better architectures of software artifacts to prevent bug affection. Many studies in the defect prediction and fault localization literature implied the dependence and interactions between multiple bugs, but few of them explicitly investigate the correlations of bugs across time steps and how bugs affect each other. In this paper, we perform social network analysis on the temporal correlations between bugs across time steps on software artifact ties, i.e., software graphs. Adopted from the correlation analysis methodology in social networks, we construct software graphs of three artifact ties such as function calls and type hierarchy and then perform longitudinal logistic regressions of time-lag bug correlations on these graphs. Our experiments on four open-source projects suggest that bugs can propagate as observed on certain artifact tie graphs. Based on our findings, we propose a hybrid artifact tie graph, a synthesis of a few well-known software graphs, that exhibits a higher degree of bug propagation. Our findings shed light on research for better bug prediction and localization models and help developers to perform maintenance actions to prevent consequential bugs.
Cite as

Xiaodong Gu, Yo-Sub Han, Sunghun Kim, and Hongyu Zhang. Do Bugs Propagate? An Empirical Analysis of Temporal Correlations Among Software Bugs. In 35th European Conference on Object-Oriented Programming (ECOOP 2021). Leibniz International Proceedings in Informatics (LIPIcs), Volume 194, pp. 11:1-11:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2021)

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@InProceedings{gu_et_al:LIPIcs.ECOOP.2021.11,
  author =	{Gu, Xiaodong and Han, Yo-Sub and Kim, Sunghun and Zhang, Hongyu},
  title =	{{Do Bugs Propagate? An Empirical Analysis of Temporal Correlations Among Software Bugs}},
  booktitle =	{35th European Conference on Object-Oriented Programming (ECOOP 2021)},
  pages =	{11:1--11:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-190-0},
  ISSN =	{1868-8969},
  year =	{2021},
  volume =	{194},
  editor =	{M{\o}ller, Anders and Sridharan, Manu},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ECOOP.2021.11},
  URN =		{urn:nbn:de:0030-drops-140540},
  doi =		{10.4230/LIPIcs.ECOOP.2021.11},
  annote =	{Keywords: empirical software engineering, bug propagation, software graph, bug correlation}
}
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