4 Search Results for "Kohl, Christina"


Document
Lower Bounds on FSS from Dynamic Data Structures

Authors: Niv Gilboa and Daniel Weber

Published in: LIPIcs, Volume 362, 17th Innovations in Theoretical Computer Science Conference (ITCS 2026)


Abstract
In Function Secret Sharing (FSS), a dealer with a given function f: {0,1}ⁿ → 𝔾 from n bits to a commutative group 𝔾 such that f is in a function class ℱ shares succinct keys with two properties. Evaluating each key separately on a common input x results in additive shares of f(x) and any subset of the keys does not provide information on f. Two-party FSS schemes which are reducible to One-way Functions (OWF) have applications in cryptography, complexity, and in practical data security systems. We establish a two-way transformation between a two-party FSS scheme for a function class ℱ, which is black-box reducible to an OWF, or even black-box reducible to a family of Pseudo-Random Functions (PRF) and a dynamic data structure that supports range queries on ℱ. A data structure of this type enables dynamically adding functions to a multiset of functions F ⊆ ℱ, and answering range queries on the output of F, i.e., returning ∑_{f ∈ F} f(x) for a query x. The data structures are defined in one of several models which abstract RAM. The correspondence together with known lower bounds on the update time and the query time in data structures leads to the first non-trivial lower bounds on FSS schemes which are black-box reducible to PRF. These lower bounds apply to FSS schemes with polynomial key size and include: - For ℱ^d_{box}, the class of all functions which assign a constant group element β ∈ 𝔾 to any input in a specified d-dimensional box and 0 to all other inputs: if the key sharing function, Gen, runs in time polynomial in n and the evaluation function is Eval then: - If d ≥ 2 and 𝔾 = ℤ₂ then Eval’s running time is Ω ((n^{3/2})/(log³ n)). - If d ≥ 2 and 𝔾 is cyclic such that log |𝔾| = (1 + ε) n then Eval’s running time is Ω ((n/(log n)) ²). - If d > 2 is a constant and further, Gen and Eval correspond to operations on data structures in the Oblivious Group Model (this includes all known FSS from OWF techniques), then the product of Eval’s time and the key size is Ω(n^{d-1}). - For ℱ_{mono}, the class of all monomials ax^b ∈ 𝔽_{2ⁿ}[X] such that b ≤ B, assuming n^{ω(1)} ≤ B ≤ 2^{n/4}: if Gen runs in polynomial time, then Eval’s running time is Ω ((n √{log B})/(log² n)).

Cite as

Niv Gilboa and Daniel Weber. Lower Bounds on FSS from Dynamic Data Structures. In 17th Innovations in Theoretical Computer Science Conference (ITCS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 362, pp. 71:1-71:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{gilboa_et_al:LIPIcs.ITCS.2026.71,
  author =	{Gilboa, Niv and Weber, Daniel},
  title =	{{Lower Bounds on FSS from Dynamic Data Structures}},
  booktitle =	{17th Innovations in Theoretical Computer Science Conference (ITCS 2026)},
  pages =	{71:1--71:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-410-9},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{362},
  editor =	{Saraf, Shubhangi},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2026.71},
  URN =		{urn:nbn:de:0030-drops-253585},
  doi =		{10.4230/LIPIcs.ITCS.2026.71},
  annote =	{Keywords: FSS, Data Structures, Lower Bounds, Black-Box Reductions}
}
Document
Differentiable Programming of Indexed Chemical Reaction Networks and Reaction-Diffusion Systems

Authors: Inhoo Lee, Salvador Buse, and Erik Winfree

Published in: LIPIcs, Volume 347, 31st International Conference on DNA Computing and Molecular Programming (DNA 31) (2025)


Abstract
Many molecular systems are best understood in terms of prototypical species and reactions. The central dogma and related biochemistry are rife with examples: gene i is transcribed into RNA i, which is translated into protein i; kinase n phosphorylates substrate m; protein p dimerizes with protein q. Engineered nucleic acid systems also often have this form: oligonucleotide i hybridizes to complementary oligonucleotide j; signal strand n displaces the output of seesaw gate m; hairpin p triggers the opening of target q. When there are many variants of a small number of prototypes, it can be conceptually cleaner and computationally more efficient to represent the full system in terms of indexed species (e.g. for dimerization, M_p, D_pq) and indexed reactions (M_p + M_q → D_pq). Here, we formalize the Indexed Chemical Reaction Network (ICRN) model and describe a Python software package designed to simulate such systems in the well-mixed and reaction-diffusion settings, using a differentiable programming framework originally developed for large-scale neural network models, taking advantage of GPU acceleration when available. Notably, this framework makes it straightforward to train the models’ initial conditions and rate constants to optimize a target behavior, such as matching experimental data, performing a computation, or exhibiting spatial pattern formation. The natural map of indexed chemical reaction networks onto neural network formalisms provides a tangible yet general perspective for translating concepts and techniques from the theory and practice of neural computation into the design of biomolecular systems.

Cite as

Inhoo Lee, Salvador Buse, and Erik Winfree. Differentiable Programming of Indexed Chemical Reaction Networks and Reaction-Diffusion Systems. In 31st International Conference on DNA Computing and Molecular Programming (DNA 31). Leibniz International Proceedings in Informatics (LIPIcs), Volume 347, pp. 4:1-4:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{lee_et_al:LIPIcs.DNA.31.4,
  author =	{Lee, Inhoo and Buse, Salvador and Winfree, Erik},
  title =	{{Differentiable Programming of Indexed Chemical Reaction Networks and Reaction-Diffusion Systems}},
  booktitle =	{31st International Conference on DNA Computing and Molecular Programming (DNA 31)},
  pages =	{4:1--4:23},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-399-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{347},
  editor =	{Schaeffer, Josie and Zhang, Fei},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.DNA.31.4},
  URN =		{urn:nbn:de:0030-drops-238534},
  doi =		{10.4230/LIPIcs.DNA.31.4},
  annote =	{Keywords: Differentiable Programming, Chemical Reaction Networks, Reaction-Diffusion Systems}
}
Document
Short Paper
Formalizing Almost Development Closed Critical Pairs (Short Paper)

Authors: Christina Kohl and Aart Middeldorp

Published in: LIPIcs, Volume 268, 14th International Conference on Interactive Theorem Proving (ITP 2023)


Abstract
We report on the first formalization of the almost-development closedness criterion for confluence of left-linear term rewrite systems and illustrate a problem we encountered while trying to formalize the original paper proof by van Oostrom.

Cite as

Christina Kohl and Aart Middeldorp. Formalizing Almost Development Closed Critical Pairs (Short Paper). In 14th International Conference on Interactive Theorem Proving (ITP 2023). Leibniz International Proceedings in Informatics (LIPIcs), Volume 268, pp. 38:1-38:8, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)


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@InProceedings{kohl_et_al:LIPIcs.ITP.2023.38,
  author =	{Kohl, Christina and Middeldorp, Aart},
  title =	{{Formalizing Almost Development Closed Critical Pairs}},
  booktitle =	{14th International Conference on Interactive Theorem Proving (ITP 2023)},
  pages =	{38:1--38:8},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-284-6},
  ISSN =	{1868-8969},
  year =	{2023},
  volume =	{268},
  editor =	{Naumowicz, Adam and Thiemann, Ren\'{e}},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITP.2023.38},
  URN =		{urn:nbn:de:0030-drops-184130},
  doi =		{10.4230/LIPIcs.ITP.2023.38},
  annote =	{Keywords: Term rewriting, confluence, certification}
}
Document
System Description
ProTeM: A Proof Term Manipulator (System Description)

Authors: Christina Kohl and Aart Middeldorp

Published in: LIPIcs, Volume 108, 3rd International Conference on Formal Structures for Computation and Deduction (FSCD 2018)


Abstract
Proof terms are a useful concept for reasoning about computations in term rewriting. Human calculation with proof terms is tedious and error-prone. We present ProTeM, a new tool that offers support for manipulating proof terms that represent multisteps in left-linear rewrite systems.

Cite as

Christina Kohl and Aart Middeldorp. ProTeM: A Proof Term Manipulator (System Description). In 3rd International Conference on Formal Structures for Computation and Deduction (FSCD 2018). Leibniz International Proceedings in Informatics (LIPIcs), Volume 108, pp. 31:1-31:8, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2018)


Copy BibTex To Clipboard

@InProceedings{kohl_et_al:LIPIcs.FSCD.2018.31,
  author =	{Kohl, Christina and Middeldorp, Aart},
  title =	{{ProTeM: A Proof Term Manipulator}},
  booktitle =	{3rd International Conference on Formal Structures for Computation and Deduction (FSCD 2018)},
  pages =	{31:1--31:8},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-077-4},
  ISSN =	{1868-8969},
  year =	{2018},
  volume =	{108},
  editor =	{Kirchner, H\'{e}l\`{e}ne},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.FSCD.2018.31},
  URN =		{urn:nbn:de:0030-drops-92013},
  doi =		{10.4230/LIPIcs.FSCD.2018.31},
  annote =	{Keywords: Proof terms, term rewriting, interactive tool}
}
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