35 Search Results for "Fu, Hu"

Document
DOI: 10.4230/LIPIcs.SoCG.2026.78
Mapping Chemical Space: Topological Data Analysis of Chemical Latent Space with Mapper

Authors: Dhruv Meduri, Chuan-Shen Hu, Cong Shen, Kelin Xia, and Bei Wang

Published in: LIPIcs, Volume 367, 42nd International Symposium on Computational Geometry (SoCG 2026)

Abstract
The vast chemical space, encompassing virtually innumerable molecules and materials, presents both immense opportunities and significant challenges. The design and discovery of novel drugs and functional materials may be viewed as a search within this space; however, the sheer scale of potential candidates renders exhaustive exploration infeasible. To address this, we introduce Chemical Mapper, a framework that integrates topological data analysis with deep learning to enable the visual exploration and analysis of chemical latent spaces. At its core, Chemical Mapper employs mapper, a widely used tool in topological data analysis, to investigate the organizational principles of chemical latent spaces defined by molecular representations learned by geometric deep learning models. In doing so, Chemical Mapper not only highlights groups of molecular representations but also uncovers the relationships among them through linkages and branching structures. Our results show that Chemical Mapper reveals intrinsic patterns associated with molecular scaffolds, functional groups, and chemical properties, as well as the structural and functional evolutions of the molecules.
Cite as

Dhruv Meduri, Chuan-Shen Hu, Cong Shen, Kelin Xia, and Bei Wang. Mapping Chemical Space: Topological Data Analysis of Chemical Latent Space with Mapper. In 42nd International Symposium on Computational Geometry (SoCG 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 367, pp. 78:1-78:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{meduri_et_al:LIPIcs.SoCG.2026.78,
  author =	{Meduri, Dhruv and Hu, Chuan-Shen and Shen, Cong and Xia, Kelin and Wang, Bei},
  title =	{{Mapping Chemical Space: Topological Data Analysis of Chemical Latent Space with Mapper}},
  booktitle =	{42nd International Symposium on Computational Geometry (SoCG 2026)},
  pages =	{78:1--78:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-418-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{367},
  editor =	{Ahn, Hee-Kap and Hoffmann, Michael and Nayyeri, Amir},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2026.78},
  URN =		{urn:nbn:de:0030-drops-258854},
  doi =		{10.4230/LIPIcs.SoCG.2026.78},
  annote =	{Keywords: Practice of computational topology, topological data analysis, applications in chemistry, mapper algorithm, high-dimensional data analysis, chemical spaces, geometric deep learning, latent space geometry}
}
Document
DOI: 10.4230/OASIcs.PARMA-DITAM.2026.8
Performance Modeling & Mapping of LLM Inference on Heterogeneous Vectorized CGRAs

Authors: Dionysios Kefallinos, Georgios Alexandris, Alexis Maras, Panagiotis Chaidos, Manil Dev Gomony, Henk Corporaal, Dimitrios Soudris, and Sotirios Xydis

Published in: OASIcs, Volume 141, 17th Workshop on Parallel Programming and Run-Time Management Techniques for Many-Core Architectures and 15th Workshop on Design Tools and Architectures for Multicore Embedded Computing Platforms (PARMA-DITAM 2026)

Abstract
Since the emergence of transformer-based models, the computational demands for Large Language Model (LLM) inference have been increasing exponentially, primarily due to their compounding parameter sizes, their structural complexity, and the use of non-linear functions. This tendency leads to the necessity of deploying them on low-power edge devices and DNN accelerators, to fuel next-generation agentic AI systems. Coarse-Grained Reconfigurable Architectures (CGRAs) have proven to be a compelling paradigm for edge acceleration, combining the programmability of general-purpose platforms with the high performance and energy efficiency associated with ASICs. In this work, we introduce an end-to-end performance modeling and mapping framework for LLM inference on heterogeneous CGRAs. Our methodology enables rapid exploration of the micro-architectural design space parameters, i.e., the number of processing elements, vector sizes, and memory configurations, by providing an accurate, explainable, and analytical CGRA performance modeling methodology, with an average cycle error of 0.9%. Architecturally, we build upon R-Blocks, a heterogeneous CGRA platform, and extend it to support floating-point arithmetic operations as well as a full-stack compilation and mapping flow for both full (FP32) and quantized (INT8) Llama2 models. The proposed methodology, evaluated on a 22nm technology node, achieves superior peak performance per Watt compared to related works such as REVAMP and CFEACT (1.8× and 2.8× respectively).
Cite as

Dionysios Kefallinos, Georgios Alexandris, Alexis Maras, Panagiotis Chaidos, Manil Dev Gomony, Henk Corporaal, Dimitrios Soudris, and Sotirios Xydis. Performance Modeling & Mapping of LLM Inference on Heterogeneous Vectorized CGRAs. In 17th Workshop on Parallel Programming and Run-Time Management Techniques for Many-Core Architectures and 15th Workshop on Design Tools and Architectures for Multicore Embedded Computing Platforms (PARMA-DITAM 2026). Open Access Series in Informatics (OASIcs), Volume 141, pp. 8:1-8:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{kefallinos_et_al:OASIcs.PARMA-DITAM.2026.8,
  author =	{Kefallinos, Dionysios and Alexandris, Georgios and Maras, Alexis and Chaidos, Panagiotis and Gomony, Manil Dev and Corporaal, Henk and Soudris, Dimitrios and Xydis, Sotirios},
  title =	{{Performance Modeling \& Mapping of LLM Inference on Heterogeneous Vectorized CGRAs}},
  booktitle =	{17th Workshop on Parallel Programming and Run-Time Management Techniques for Many-Core Architectures and 15th Workshop on Design Tools and Architectures for Multicore Embedded Computing Platforms (PARMA-DITAM 2026)},
  pages =	{8:1--8:14},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-416-1},
  ISSN =	{2190-6807},
  year =	{2026},
  volume =	{141},
  editor =	{Baroffio, Davide and Busia, Paola and Denisov, Lev and Shukla, Nitin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.PARMA-DITAM.2026.8},
  URN =		{urn:nbn:de:0030-drops-256752},
  doi =		{10.4230/OASIcs.PARMA-DITAM.2026.8},
  annote =	{Keywords: Edge AI, LLM, CGRA, Heterogeneous Architectures, Performance Modeling, Hardware Acceleration, Low Power Computing}
}
Document
DOI: 10.4230/OASIcs.NINeS.2026.18
TURBO: Utility-Aware Bandwidth Allocation for Cloud-Augmented Autonomous Control

Authors: Peter Schafhalter, Alexander Krentsel, Hongbo Wei, Joseph E. Gonzalez, Sylvia Ratnasamy, Scott Shenker, and Ion Stoica

Published in: OASIcs, Volume 139, 1st New Ideas in Networked Systems (NINeS 2026)

Abstract
Autonomous driving system progress has been driven by improvements in machine learning (ML) models, whose computational demands now exceed what edge devices alone can provide. The cloud offers abundant compute, but the network has long been treated as an unreliable bottleneck rather than a co-equal part of the autonomous vehicle control loop. We argue that this separation is no longer tenable: safety-critical autonomy requires co-design of control, models, and network resource allocation itself. We introduce TURBO, a cloud-augmented control framework that addresses this challenge, formulating bandwidth allocation and control pipeline configuration across both the car and cloud as a joint optimization problem. TURBO maximizes benefit to the car while guaranteeing safety in the face of highly variable network conditions. We implement TURBO and evaluate it in both simulation and real-world deployment, showing it can improve average accuracy by up to 15.6%pt over existing on-vehicle-only pipelines. Our code is made available at www.github.com/NetSys/turbo.
Cite as

Peter Schafhalter, Alexander Krentsel, Hongbo Wei, Joseph E. Gonzalez, Sylvia Ratnasamy, Scott Shenker, and Ion Stoica. TURBO: Utility-Aware Bandwidth Allocation for Cloud-Augmented Autonomous Control. In 1st New Ideas in Networked Systems (NINeS 2026). Open Access Series in Informatics (OASIcs), Volume 139, pp. 18:1-18:34, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{schafhalter_et_al:OASIcs.NINeS.2026.18,
  author =	{Schafhalter, Peter and Krentsel, Alexander and Wei, Hongbo and Gonzalez, Joseph E. and Ratnasamy, Sylvia and Shenker, Scott and Stoica, Ion},
  title =	{{TURBO: Utility-Aware Bandwidth Allocation for Cloud-Augmented Autonomous Control}},
  booktitle =	{1st New Ideas in Networked Systems (NINeS 2026)},
  pages =	{18:1--18:34},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-414-7},
  ISSN =	{2190-6807},
  year =	{2026},
  volume =	{139},
  editor =	{Argyraki, Katerina and Panda, Aurojit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.NINeS.2026.18},
  URN =		{urn:nbn:de:0030-drops-256039},
  doi =		{10.4230/OASIcs.NINeS.2026.18},
  annote =	{Keywords: autonomous vehicles, bandwidth allocation, cloud computing, edge computing, machine learning}
}
Document
DOI: 10.4230/OASIcs.NINeS.2026.19
Simulate Before Sending: Rethinking Transport in Datacenter Networks

Authors: Dan Straussman, Isaac Keslassy, Alexander Shpiner, and Liran Liss

Published in: OASIcs, Volume 139, 1st New Ideas in Networked Systems (NINeS 2026)

Abstract
Existing transport protocols in commodity datacenter networks struggle to provide low collective completion times (CCTs) to AI training collectives, as packet losses and retransmissions significantly degrade performance. We propose dcSim, an efficient transport that achieves low CCTs and practically lossless performance with commodity switches. In dcSim, each packet first employs a small simulation probe to traverse the network and explore congestion along a candidate path. Only packets whose simulation probes succeed are then transmitted, expecting to succeed as well. Evaluations confirm that dcSim achieves faster CCTs than existing schemes, with small queues and virtually zero packet loss. Finally, dcSim also excels in adverse conditions, including oversubscribed topologies.
Cite as

Dan Straussman, Isaac Keslassy, Alexander Shpiner, and Liran Liss. Simulate Before Sending: Rethinking Transport in Datacenter Networks. In 1st New Ideas in Networked Systems (NINeS 2026). Open Access Series in Informatics (OASIcs), Volume 139, pp. 19:1-19:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{straussman_et_al:OASIcs.NINeS.2026.19,
  author =	{Straussman, Dan and Keslassy, Isaac and Shpiner, Alexander and Liss, Liran},
  title =	{{Simulate Before Sending: Rethinking Transport in Datacenter Networks}},
  booktitle =	{1st New Ideas in Networked Systems (NINeS 2026)},
  pages =	{19:1--19:22},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-414-7},
  ISSN =	{2190-6807},
  year =	{2026},
  volume =	{139},
  editor =	{Argyraki, Katerina and Panda, Aurojit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.NINeS.2026.19},
  URN =		{urn:nbn:de:0030-drops-256044},
  doi =		{10.4230/OASIcs.NINeS.2026.19},
  annote =	{Keywords: Datacenter networks, transport protocols, AI training, lossless networks}
}
Document
DOI: 10.4230/OASIcs.NINeS.2026.24
SwiftQueue: Optimizing Low-Latency Applications with Swift Packet Queuing

Authors: Siddhant Ray, Xi Jiang, Jack Luo, Nick Feamster, and Junchen Jiang

Published in: OASIcs, Volume 139, 1st New Ideas in Networked Systems (NINeS 2026)

Abstract
Low Latency, Low Loss, and Scalable Throughput (L4S), as an emerging router-queue management technique, has seen steady deployment in the industry. An L4S-enabled router assigns each packet to the queue based on the packet header marking. Currently, L4S employs per-flow queue selection, i.e., all packets of a flow are marked the same way and thus use the same queues, even though each packet is marked separately. However, this may hurt tail latency and latency-sensitive applications because transient congestion and queue buildups may only affect a fraction of packets in a flow. We present SwiftQueue, a new L4S queue-selection strategy in which a sender uses a novel per-packet latency predictor to pinpoint which packets likely have latency spikes or drops. The insight is that many packet-level latency variations result from complex interactions among recent packets at shared router queues. Yet, these intricate packet-level latency patterns are hard to learn efficiently by traditional models. Instead, SwiftQueue uses a custom Transformer, which is well-studied for its expressiveness on sequential patterns, to predict the next packet’s latency based on the latencies of recently received ACKs. Based on the predicted latency of each outgoing packet, SwiftQueue’s sender dynamically marks the L4S packet header to assign packets to potentially different queues, even within the same flow. Using real network traces, we show that SwiftQueue is 45-65% more accurate in predicting latency and its variations than state-of-art methods. Based on its latency prediction, SwiftQueue reduces the tail latency for L4S-enabled flows by 36-45%, compared with the existing L4S queue-selection method.
Cite as

Siddhant Ray, Xi Jiang, Jack Luo, Nick Feamster, and Junchen Jiang. SwiftQueue: Optimizing Low-Latency Applications with Swift Packet Queuing. In 1st New Ideas in Networked Systems (NINeS 2026). Open Access Series in Informatics (OASIcs), Volume 139, pp. 24:1-24:29, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{ray_et_al:OASIcs.NINeS.2026.24,
  author =	{Ray, Siddhant and Jiang, Xi and Luo, Jack and Feamster, Nick and Jiang, Junchen},
  title =	{{SwiftQueue: Optimizing Low-Latency Applications with Swift Packet Queuing}},
  booktitle =	{1st New Ideas in Networked Systems (NINeS 2026)},
  pages =	{24:1--24:29},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-414-7},
  ISSN =	{2190-6807},
  year =	{2026},
  volume =	{139},
  editor =	{Argyraki, Katerina and Panda, Aurojit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.NINeS.2026.24},
  URN =		{urn:nbn:de:0030-drops-256093},
  doi =		{10.4230/OASIcs.NINeS.2026.24},
  annote =	{Keywords: Latency prediction, L4S Queue Management}
}
Document
DOI: 10.4230/OASIcs.NINeS.2026.28
CrowdLink: Unlocking Idle LEO Network Capacity with User Terminals

Authors: Lixin Liu, Jinyao Zhang, Bijia You, Yimei Chen, Jiabo Yang, Yuanjie Li, Hewu Li, Qian Wu, Zeqi Lai, and Jun Liu

Published in: OASIcs, Volume 139, 1st New Ideas in Networked Systems (NINeS 2026)

Abstract
The Low Earth Orbit (LEO) network is booming worldwide thanks to its unprecedented number of satellites. However, most of these satellites remain underutilized to connect more users or boost performance, posing tensions for their return on investment. A critical cause is that their gateways to the Internet (ground stations) are geographically skewed or even centralized, forming last-mile bottlenecks. We examine the potential of eliminating these bottlenecks with ubiquitous user terminals (UTs). Our solution, CrowdLink, reuses UTs as local access points to decentralize satellites' gateways to the Internet, and as relays to convert idle satellite radio links into additional paths for more network capacity. This user-centric paradigm is self-scaling to more UTs and satellites (akin to P2P networks), resilient to rapid satellite mobility, mutually beneficial for users and operators, and readily deployable in operational LEO networks. Our real tests with Starlink UTs across three countries and large-scale simulations show that CrowdLink can increase each UT’s throughput by 3.09× on average (up to 65.27×), double the LEO network capacity utilization, and unlock 2.05-7.99 million more users for Starlink without adding satellites/ground stations.
Cite as

Lixin Liu, Jinyao Zhang, Bijia You, Yimei Chen, Jiabo Yang, Yuanjie Li, Hewu Li, Qian Wu, Zeqi Lai, and Jun Liu. CrowdLink: Unlocking Idle LEO Network Capacity with User Terminals. In 1st New Ideas in Networked Systems (NINeS 2026). Open Access Series in Informatics (OASIcs), Volume 139, pp. 28:1-28:26, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{liu_et_al:OASIcs.NINeS.2026.28,
  author =	{Liu, Lixin and Zhang, Jinyao and You, Bijia and Chen, Yimei and Yang, Jiabo and Li, Yuanjie and Li, Hewu and Wu, Qian and Lai, Zeqi and Liu, Jun},
  title =	{{CrowdLink: Unlocking Idle LEO Network Capacity with User Terminals}},
  booktitle =	{1st New Ideas in Networked Systems (NINeS 2026)},
  pages =	{28:1--28:26},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-414-7},
  ISSN =	{2190-6807},
  year =	{2026},
  volume =	{139},
  editor =	{Argyraki, Katerina and Panda, Aurojit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.NINeS.2026.28},
  URN =		{urn:nbn:de:0030-drops-256130},
  doi =		{10.4230/OASIcs.NINeS.2026.28},
  annote =	{Keywords: LEO Satellite Networks, User Terminal Relaying, Capacity Utilization}
}
Document
DOI: 10.4230/OASIcs.NINeS.2026.5
OrbitalBrain: A Distributed Framework for Training ML Models in Space

Authors: Om Chabra, Chenning Li, Kevin Hsieh, Santiago Segarra, Behnaz Arzani, Peder Olsen, and Ranveer Chandra

Published in: OASIcs, Volume 139, 1st New Ideas in Networked Systems (NINeS 2026)

Abstract
Earth observation nanosatellites capture high-resolution photos of the Earth in near real-time. These images increasingly support ML applications that are critical for safety and response, such as forest fire and flood detection. However, the downlink bandwidth is limited, resulting in days or weeks of delay from image capture to training. In this work, we propose OrbitalBrain, an efficient in-space distributed ML training framework that leverages limited and predictable satellite compute, bandwidth, and power to intelligently balance data transfer, model aggregation, and local training. Our evaluations demonstrate that OrbitalBrain achieves 1.52×-12.4× speedup in time-to-accuracy while always reaching a higher final model accuracy compared to state-of-the-art ground-based or federated learning baselines. Furthermore, our approach is complementary to satellite imagery capturing and downloading, enhancing the overall efficiency of satellite-based applications.
Cite as

Om Chabra, Chenning Li, Kevin Hsieh, Santiago Segarra, Behnaz Arzani, Peder Olsen, and Ranveer Chandra. OrbitalBrain: A Distributed Framework for Training ML Models in Space. In 1st New Ideas in Networked Systems (NINeS 2026). Open Access Series in Informatics (OASIcs), Volume 139, pp. 5:1-5:32, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{chabra_et_al:OASIcs.NINeS.2026.5,
  author =	{Chabra, Om and Li, Chenning and Hsieh, Kevin and Segarra, Santiago and Arzani, Behnaz and Olsen, Peder and Chandra, Ranveer},
  title =	{{OrbitalBrain: A Distributed Framework for Training ML Models in Space}},
  booktitle =	{1st New Ideas in Networked Systems (NINeS 2026)},
  pages =	{5:1--5:32},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-414-7},
  ISSN =	{2190-6807},
  year =	{2026},
  volume =	{139},
  editor =	{Argyraki, Katerina and Panda, Aurojit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.NINeS.2026.5},
  URN =		{urn:nbn:de:0030-drops-255907},
  doi =		{10.4230/OASIcs.NINeS.2026.5},
  annote =	{Keywords: Satellite networks, Distributed machine learning, Federated learning, Earth observation, In-orbit computing}
}
Document
DOI: 10.4230/LIPIcs.STACS.2026.27
The Communication Complexity of Combinatorial Auctions in Graphs

Authors: George Christodoulou, Elias Koutsoupias, Annamária Kovács, and Ioannis Vlachos

Published in: LIPIcs, Volume 364, 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)

Abstract
We study truthful and non-truthful protocols for combinatorial auctions in which every item can be allocated to one of two agents (multigraphs), or more generally to a fixed number of agents (hypergraphs). We show some tight - both positive and impossibility - results for the communication complexity of approximating the optimal social welfare for general monotone, subadditive, or XOS valuations.
Cite as

George Christodoulou, Elias Koutsoupias, Annamária Kovács, and Ioannis Vlachos. The Communication Complexity of Combinatorial Auctions in Graphs. In 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 364, pp. 27:1-27:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{christodoulou_et_al:LIPIcs.STACS.2026.27,
  author =	{Christodoulou, George and Koutsoupias, Elias and Kov\'{a}cs, Annam\'{a}ria and Vlachos, Ioannis},
  title =	{{The Communication Complexity of Combinatorial Auctions in Graphs}},
  booktitle =	{43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)},
  pages =	{27:1--27:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-412-3},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{364},
  editor =	{Mahajan, Meena and Manea, Florin and McIver, Annabelle and Thắng, Nguy\~{ê}n Kim},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2026.27},
  URN =		{urn:nbn:de:0030-drops-255163},
  doi =		{10.4230/LIPIcs.STACS.2026.27},
  annote =	{Keywords: Auctions, Communication Complexity, Mechanism Design, Graphs}
}
Document
DOI: 10.4230/LIPIcs.ITCS.2026.94
Smoothed Analysis of Online Metric Matching with a Single Sample: Beyond Metric Distortion

Authors: Yingxi Li, Ellen Vitercik, and Mingwei Yang

Published in: LIPIcs, Volume 362, 17th Innovations in Theoretical Computer Science Conference (ITCS 2026)

Abstract
In the online metric matching problem, n servers and n requests lie in a metric space. Servers are available upfront, and requests arrive sequentially. An arriving request must be matched immediately and irrevocably to an available server, incurring a cost equal to their distance. The goal is to minimize the total matching cost. We study this problem in [0, 1]^d with the Euclidean metric, when servers are adversarial and requests are independently drawn from distinct distributions that satisfy a mild smoothness condition. Our main result is an O(1)-competitive algorithm for d ≠ 2 that requires no distributional knowledge, relying only on a single sample from each request distribution. To our knowledge, this is the first algorithm to achieve an o(log n) competitive ratio for non-trivial metrics beyond the i.i.d. setting. Our approach bypasses the Ω(log n) barrier introduced by probabilistic metric embeddings: instead of analyzing the embedding distortion and the algorithm separately, we directly bound the cost of the algorithm on the target metric space of a simple deterministic embedding. We then combine this analysis with lower bounds on the offline optimum for Euclidean metrics, derived via majorization arguments, to obtain our guarantees.
Cite as

Yingxi Li, Ellen Vitercik, and Mingwei Yang. Smoothed Analysis of Online Metric Matching with a Single Sample: Beyond Metric Distortion. In 17th Innovations in Theoretical Computer Science Conference (ITCS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 362, pp. 94:1-94:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{li_et_al:LIPIcs.ITCS.2026.94,
  author =	{Li, Yingxi and Vitercik, Ellen and Yang, Mingwei},
  title =	{{Smoothed Analysis of Online Metric Matching with a Single Sample: Beyond Metric Distortion}},
  booktitle =	{17th Innovations in Theoretical Computer Science Conference (ITCS 2026)},
  pages =	{94:1--94:23},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-410-9},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{362},
  editor =	{Saraf, Shubhangi},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2026.94},
  URN =		{urn:nbn:de:0030-drops-253815},
  doi =		{10.4230/LIPIcs.ITCS.2026.94},
  annote =	{Keywords: Online algorithm, Metric matching, Competitive analysis, Smoothed analysis}
}
Document
Research
DOI: 10.4230/TGDK.3.3.4
Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web

Authors: Florian Ruosch, Cristina Sarasua, and Abraham Bernstein

Published in: TGDK, Volume 3, Issue 3 (2025). Transactions on Graph Data and Knowledge, Volume 3, Issue 3

Abstract
In Argument Mining, predicting argumentative relations between texts (or spans) remains one of the most challenging aspects, even more so in the cross-document setting. This paper makes three key contributions to advance research in this domain. We first extend an existing dataset, the Sci-Arg corpus, by annotating it with explicit inter-document argumentative relations, thereby allowing arguments to be distributed over several documents forming an Argument Web; these new annotations are published using Semantic Web technologies (RDF, OWL). Second, we explore and evaluate three automated approaches for predicting these inter-document argumentative relations, establishing critical baselines on the new dataset. We find that a simple classifier based on discourse indicators with access to context outperforms neural methods. Third, we conduct a comparative analysis of these approaches for both intra- and inter-document settings, identifying statistically significant differences in results that indicate the necessity of distinguishing between these two scenarios. Our findings highlight significant challenges in this complex domain and open crucial avenues for future research on the Argument Web of Science, particularly for those interested in leveraging Semantic Web technologies and knowledge graphs to understand scholarly discourse. With this, we provide the first stepping stones in the form of a benchmark dataset, three baseline methods, and an initial analysis for a systematic exploration of this field relevant to the Web of Data and Science.
Cite as

Florian Ruosch, Cristina Sarasua, and Abraham Bernstein. Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web. In Transactions on Graph Data and Knowledge (TGDK), Volume 3, Issue 3, pp. 4:1-4:33, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@Article{ruosch_et_al:TGDK.3.3.4,
  author =	{Ruosch, Florian and Sarasua, Cristina and Bernstein, Abraham},
  title =	{{Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{4:1--4:33},
  ISSN =	{2942-7517},
  year =	{2025},
  volume =	{3},
  number =	{3},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.3.3.4},
  URN =		{urn:nbn:de:0030-drops-252159},
  doi =		{10.4230/TGDK.3.3.4},
  annote =	{Keywords: Argument Mining, Large Language Models, Knowledge Graphs, Link Prediction}
}
Document
DOI: 10.4230/LIPIcs.GD.2025.11
Towards a Better Understanding of Graph Perception in Immersive Environments

Authors: Lin Zhang, Yao Wang, Ying Zhang, Wilhelm Kerle-Malcharek, Karsten Klein, Falk Schreiber, and Andreas Bulling

Published in: LIPIcs, Volume 357, 33rd International Symposium on Graph Drawing and Network Visualization (GD 2025)

Abstract
As Immersive Analytics (IA) increasingly uses Virtual Reality (VR) for stereoscopic 3D (S3D) graph visualisation, it is crucial to understand how users perceive network structures in these immersive environments. However, little is known about how humans read S3D graphs during task solving, and how gaze behaviour indicates task performance. To address this gap, we report a user study with 18 participants asked to perform three analytical tasks on S3D graph visualisations in a VR environment. Our findings reveal systematic relationships between network structural properties and gaze behaviour. Based on these insights, we contribute a comprehensive eye tracking methodology for analysing human perception in immersive environments and establish eye tracking as a valuable tool for objectively evaluating cognitive load in S3D graph visualisation.
Cite as

Lin Zhang, Yao Wang, Ying Zhang, Wilhelm Kerle-Malcharek, Karsten Klein, Falk Schreiber, and Andreas Bulling. Towards a Better Understanding of Graph Perception in Immersive Environments. In 33rd International Symposium on Graph Drawing and Network Visualization (GD 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 357, pp. 11:1-11:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{zhang_et_al:LIPIcs.GD.2025.11,
  author =	{Zhang, Lin and Wang, Yao and Zhang, Ying and Kerle-Malcharek, Wilhelm and Klein, Karsten and Schreiber, Falk and Bulling, Andreas},
  title =	{{Towards a Better Understanding of Graph Perception in Immersive Environments}},
  booktitle =	{33rd International Symposium on Graph Drawing and Network Visualization (GD 2025)},
  pages =	{11:1--11:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-403-1},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{357},
  editor =	{Dujmovi\'{c}, Vida and Montecchiani, Fabrizio},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.GD.2025.11},
  URN =		{urn:nbn:de:0030-drops-249976},
  doi =		{10.4230/LIPIcs.GD.2025.11},
  annote =	{Keywords: Stereoscopic 3D, Graph Visualisation, Eye Tracking, Graph Perception}
}
Document
DOI: 10.4230/OASIcs.DX.2025.9
Optimized Spectral Fault Receptive Fields for Diagnosis-Informed Prognosis

Authors: Stan Muñoz Gutiérrez and Franz Wotawa

Published in: OASIcs, Volume 136, 36th International Conference on Principles of Diagnosis and Resilient Systems (DX 2025)

Abstract
This paper introduces Spectral Fault Receptive Fields (SFRFs), a biologically inspired technique for degradation state assessment in bearing fault diagnosis and remaining useful life (RUL) estimation. Drawing on the center-surround organization of retinal ganglion cell receptive fields, we propose a frequency-domain feature extraction algorithm that enhances the detection of fault signatures in vibration signals. SFRFs are designed as antagonistic spectral filters centered on characteristic fault frequencies, with inhibitory surrounds that enable robust characterization of incipient faults under variable operating conditions. A multi-objective evolutionary optimization strategy based on NSGA-II algorithm is employed to tune the receptive field parameters by simultaneously minimizing RUL prediction error, maximizing feature monotonicity, and promoting smooth degradation trajectories. The method is demonstrated on the XJTU-SY bearing run-to-failure dataset, confirming its suitability for constructing condition indicators in health monitoring applications. Key contributions include: (i) the introduction of SFRFs, inspired by the biology of vision in the primate retina; (ii) an evolutionary optimization framework guided by condition monitoring and prognosis criteria; and (iii) experimental evidence supporting the detection of early-stage faults and their precursors. Furthermore, we confirm that our diagnosis-informed spectral representation achieves accurate RUL prediction using a bagging regressor. The results highlight the interpretability and principled design of SFRFs, bridging signal processing, biological sensing principles, and data-driven prognostics in rotating machinery.
Cite as

Stan Muñoz Gutiérrez and Franz Wotawa. Optimized Spectral Fault Receptive Fields for Diagnosis-Informed Prognosis. In 36th International Conference on Principles of Diagnosis and Resilient Systems (DX 2025). Open Access Series in Informatics (OASIcs), Volume 136, pp. 9:1-9:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{munozgutierrez_et_al:OASIcs.DX.2025.9,
  author =	{Mu\~{n}oz Guti\'{e}rrez, Stan and Wotawa, Franz},
  title =	{{Optimized Spectral Fault Receptive Fields for Diagnosis-Informed Prognosis}},
  booktitle =	{36th International Conference on Principles of Diagnosis and Resilient Systems (DX 2025)},
  pages =	{9:1--9:20},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-394-2},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{136},
  editor =	{Quinones-Grueiro, Marcos and Biswas, Gautam and Pill, Ingo},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.DX.2025.9},
  URN =		{urn:nbn:de:0030-drops-247986},
  doi =		{10.4230/OASIcs.DX.2025.9},
  annote =	{Keywords: Health Perception, Spectral Fault Receptive Fields, Remaining Useful Life, Incipient Fault Diagnosis, Prognostics and Health Management, Condition Monitoring, Evolutionary Multi-Objective Optimization, Bagged Regression Tree Ensemble, Bearing Fault Diagnosis}
}
Document
DOI: 10.4230/LIPIcs.AFT.2025.1
Cache Timing Leakages in Zero-Knowledge Protocols

Authors: Shibam Mukherjee, Christian Rechberger, and Markus Schofnegger

Published in: LIPIcs, Volume 354, 7th Conference on Advances in Financial Technologies (AFT 2025)

Abstract
The area of modern zero-knowledge proof systems has seen a significant rise in popularity over the last couple of years, with new techniques and optimized constructions emerging on a regular basis. As the field matures, the aspect of implementation attacks becomes more relevant, however side-channel attacks on zero-knowledge proof systems have seen surprisingly little treatment so far. In this paper, we give an overview of potential attack vectors and show that some of the underlying finite field libraries, and implementations of heavily used components like hash functions using them, are vulnerable w.r.t. cache attacks on CPUs. On the positive side, we demonstrate that the computational overhead to protect against these attacks is relatively small.
Cite as

Shibam Mukherjee, Christian Rechberger, and Markus Schofnegger. Cache Timing Leakages in Zero-Knowledge Protocols. In 7th Conference on Advances in Financial Technologies (AFT 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 354, pp. 1:1-1:26, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{mukherjee_et_al:LIPIcs.AFT.2025.1,
  author =	{Mukherjee, Shibam and Rechberger, Christian and Schofnegger, Markus},
  title =	{{Cache Timing Leakages in Zero-Knowledge Protocols}},
  booktitle =	{7th Conference on Advances in Financial Technologies (AFT 2025)},
  pages =	{1:1--1:26},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-400-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{354},
  editor =	{Avarikioti, Zeta and Christin, Nicolas},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.AFT.2025.1},
  URN =		{urn:nbn:de:0030-drops-247201},
  doi =		{10.4230/LIPIcs.AFT.2025.1},
  annote =	{Keywords: zero-knowledge, protocol, cache timing, side-channel, leakage}
}
Document
DOI: 10.4230/LIPIcs.ESA.2025.52
Beating Competitive Ratio 4 for Graphic Matroid Secretary

Authors: Kiarash Banihashem, MohammadTaghi Hajiaghayi, Dariusz R. Kowalski, Piotr Krysta, Danny Mittal, and Jan Olkowski

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)

Abstract
One of the classic problems in online decision-making is the secretary problem, where the goal is to hire the best secretary out of n rankable applicants or, in a natural extension, to maximize the probability of selecting the largest number from a sequence arriving in random order. Many works have considered generalizations of this problem where one can accept multiple values subject to a combinatorial constraint. The seminal work of Babaioff, Immorlica, Kempe, and Kleinberg (SODA'07, JACM'18) proposed the matroid secretary conjecture, suggesting that there exists an O(1)-competitive algorithm for the matroid constraint, and many works since have attempted to obtain algorithms for both general matroids and specific classes of matroids. The ultimate goal of these results is to obtain an e-competitive algorithm, and the strong matroid secretary conjecture states that this is possible for general matroids. One of the most important classes of matroids is the graphic matroid, where a set of edges in a graph is deemed independent if it contains no cycle. Given the rich combinatorial structure of graphs, obtaining algorithms for these matroids is often seen as a good first step towards solving the problem for general matroids. For matroid secretary, Babaioff et al. (SODA'07, JACM'18) first studied graphic matroid case and obtained a 16-competitive algorithm. Subsequent works have improved the competitive ratio, most recently to 4 by Soto, Turkieltaub, and Verdugo (SODA'18). In this paper, we break the 4-competitive barrier for the problem, obtaining a new algorithm with a competitive ratio of 3.95. For the special case of simple graphs (i.e., graphs that do not contain parallel edges) we further improve this to 3.77. Intuitively, solving the problem for simple graphs is easier as they do not contain cycles of length two. A natural question that arises is whether we can obtain a ratio arbitrarily close to e by assuming the graph has a large enough girth. We answer this question affirmatively, proving that one can obtain a competitive ratio arbitrarily close to e even for constant values of girth, providing further evidence for the strong matroid secretary conjecture. We further show that this bound is tight: for any constant g, one cannot obtain a competitive ratio better than e even if we assume that the input graph has girth at least g. To our knowledge, such a bound was not previously known even for simple graphs.
Cite as

Kiarash Banihashem, MohammadTaghi Hajiaghayi, Dariusz R. Kowalski, Piotr Krysta, Danny Mittal, and Jan Olkowski. Beating Competitive Ratio 4 for Graphic Matroid Secretary. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 52:1-52:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{banihashem_et_al:LIPIcs.ESA.2025.52,
  author =	{Banihashem, Kiarash and Hajiaghayi, MohammadTaghi and Kowalski, Dariusz R. and Krysta, Piotr and Mittal, Danny and Olkowski, Jan},
  title =	{{Beating Competitive Ratio 4 for Graphic Matroid Secretary}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{52:1--52:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.52},
  URN =		{urn:nbn:de:0030-drops-245205},
  doi =		{10.4230/LIPIcs.ESA.2025.52},
  annote =	{Keywords: online algorithms, graphic matroids, secretary problem}
}
Document
DOI: 10.4230/LIPIcs.DNA.31.11
Leakless Polymerase-Dependent Strand Displacement Systems

Authors: Zoë Evelyn Mōhalakealoha Derauf and Chris Thachuk

Published in: LIPIcs, Volume 347, 31st International Conference on DNA Computing and Molecular Programming (DNA 31) (2025)

Abstract
A grand challenge facing molecular programmers is the rational development of fast, robust, and isothermal architectures akin to "chemical central processing units" that can sense (bio-)chemical signals from their environment, perform complex computation, and orchestrate a physical response in situ. DNA strand displacement systems (DSDs) remain a compelling candidate, but are hampered by spurious reaction pathways that lead to incorrect output. DSDs that utilize the systematic leakless motif can be made arbitrarily robust at the cost of increasing redundancy and network size (scaling), and thus a degradation of kinetic performance. Another class of architectures utilize DNA hybridization, extension, and signal production of entirely sequestered outputs via strand-displacing polymerases (SDPs) that have resulted in impressive demonstrations; however, they face similar challenges of aberrant behavior such as mis-priming by incorrect signals. Our work introduces a unified polymerase-dependent toehold-mediated strand displacement (PD-TMSD) architecture that integrates the programmed specificity of DSDs with the unique advantages of SDPs. This unification enables systems that can be made arbitrarily robust, at any concentration range, without increasing network size. We propose a number of gate designs and composition rules to compute arbitrary Boolean functions, emulate arbitrary chemical reaction networks, and explore time-bounded probabilistic computation made possible by certain classes of SDPs. Our theoretical exploration is backed by preliminary experimental demonstrations. This contribution was inspired by the belief that molecular programming can meet or exceed the complexity exhibited in biology if we embrace its best understood molecular machinery and couple it with systematic design principles built upon a strong theoretical foundation.
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Zoë Evelyn Mōhalakealoha Derauf and Chris Thachuk. Leakless Polymerase-Dependent Strand Displacement Systems. In 31st International Conference on DNA Computing and Molecular Programming (DNA 31). Leibniz International Proceedings in Informatics (LIPIcs), Volume 347, pp. 11:1-11:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{derauf_et_al:LIPIcs.DNA.31.11,
  author =	{Derauf, Zo\"{e} Evelyn M\={o}halakealoha and Thachuk, Chris},
  title =	{{Leakless Polymerase-Dependent Strand Displacement Systems}},
  booktitle =	{31st International Conference on DNA Computing and Molecular Programming (DNA 31)},
  pages =	{11:1--11:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-399-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{347},
  editor =	{Schaeffer, Josie and Zhang, Fei},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.DNA.31.11},
  URN =		{urn:nbn:de:0030-drops-238608},
  doi =		{10.4230/LIPIcs.DNA.31.11},
  annote =	{Keywords: DNA strand displacement, strand-displacing polymerases, molecular computation, energy barriers, kinetics}
}
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