4 Search Results for "Fundulaki, Irini"

Document
Research
DOI: 10.4230/TGDK.4.1.4
Native Provenance Computation for Federated and Non-Federated SPARQL Queries

Authors: Zubaria Asma, Daniel Hernández, Luis Galárraga, Giorgos Flouris, Irini Fundulaki, and Katja Hose

Published in: TGDK, Volume 4, Issue 1 (2026). Transactions on Graph Data and Knowledge, Volume 4, Issue 1

Abstract
The popularity of knowledge graphs (KGs) owes credit to their flexible data model, which is suitable for data integration from multiple sources. Several KG-based applications, such as trust assessment, view maintenance, or data valuation on dynamic data, rely on the ability to compute provenance explanations for query results. This need becomes more urgent in federated query processing systems, which allow the online consumption of heterogeneous and decentralized Web data. However, the problem of computing and interacting with provenance has received little attention, especially in the federated setting. On those grounds, this paper introduces the NPCS (Native Provenance Computation for SPARQL) approach, and its federated variant Fed-NPCS, that compute provenance for SPARQL query results. Both approaches build upon spm-semirings to annotate the results of monotonic and non-monotonic SPARQL queries with their provenance. Due to their reliance on query rewriting techniques, the approaches are directly applicable to already deployed SPARQL engines and federations using different reification schemes, including RDF-star. Our experimental evaluation shows that our novel query rewriting approach brings significant run-time improvements w.r.t. the state-of-the-art across both centralized and federated settings. In centralized settings, our tests on two popular SPARQL engines (GraphDB and Stardog) reveal substantial runtime gains over existing query rewriting solutions, enabling scalability to RDF graphs with billions of triples. In federated settings, our experiments on the FedShop benchmark with GraphDB show the viability of Fed-NPCS for federations with up to 200 sources.
Cite as

Zubaria Asma, Daniel Hernández, Luis Galárraga, Giorgos Flouris, Irini Fundulaki, and Katja Hose. Native Provenance Computation for Federated and Non-Federated SPARQL Queries. In Transactions on Graph Data and Knowledge (TGDK), Volume 4, Issue 1, pp. 4:1-4:43, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@Article{asma_et_al:TGDK.4.1.4,
  author =	{Asma, Zubaria and Hern\'{a}ndez, Daniel and Gal\'{a}rraga, Luis and Flouris, Giorgos and Fundulaki, Irini and Hose, Katja},
  title =	{{Native Provenance Computation for Federated and Non-Federated SPARQL Queries}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{4:1--4:43},
  ISSN =	{2942-7517},
  year =	{2026},
  volume =	{4},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.4.1.4},
  URN =		{urn:nbn:de:0030-drops-259642},
  doi =		{10.4230/TGDK.4.1.4},
  annote =	{Keywords: native provenance computation, federated SPARQL queries, data provenance, NPCS, Fed-NPCS}
}
Document
Survey
DOI: 10.4230/TGDK.2.1.3
Semantic Web: Past, Present, and Future

Authors: Ansgar Scherp, Gerd Groener, Petr Škoda, Katja Hose, and Maria-Esther Vidal

Published in: TGDK, Volume 2, Issue 1 (2024): Special Issue on Trends in Graph Data and Knowledge - Part 2. Transactions on Graph Data and Knowledge, Volume 2, Issue 1

Abstract
Ever since the vision was formulated, the Semantic Web has inspired many generations of innovations. Semantic technologies have been used to share vast amounts of information on the Web, enhance them with semantics to give them meaning, and enable inference and reasoning on them. Throughout the years, semantic technologies, and in particular knowledge graphs, have been used in search engines, data integration, enterprise settings, and machine learning. In this paper, we recap the classical concepts and foundations of the Semantic Web as well as modern and recent concepts and applications, building upon these foundations. The classical topics we cover include knowledge representation, creating and validating knowledge on the Web, reasoning and linking, and distributed querying. We enhance this classical view of the so-called "Semantic Web Layer Cake" with an update of recent concepts that include provenance, security and trust, as well as a discussion of practical impacts from industry-led contributions. We conclude with an outlook on the future directions of the Semantic Web. This is a living document. If you like to contribute, please contact the first author and visit: https://github.com/ascherp/semantic-web-primer
Cite as

Ansgar Scherp, Gerd Groener, Petr Škoda, Katja Hose, and Maria-Esther Vidal. Semantic Web: Past, Present, and Future. In Special Issue on Trends in Graph Data and Knowledge - Part 2. Transactions on Graph Data and Knowledge (TGDK), Volume 2, Issue 1, pp. 3:1-3:37, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@Article{scherp_et_al:TGDK.2.1.3,
  author =	{Scherp, Ansgar and Groener, Gerd and \v{S}koda, Petr and Hose, Katja and Vidal, Maria-Esther},
  title =	{{Semantic Web: Past, Present, and Future}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{3:1--3:37},
  ISSN =	{2942-7517},
  year =	{2024},
  volume =	{2},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.2.1.3},
  URN =		{urn:nbn:de:0030-drops-198607},
  doi =		{10.4230/TGDK.2.1.3},
  annote =	{Keywords: Linked Open Data, Semantic Web Graphs, Knowledge Graphs}
}
Document
Position
DOI: 10.4230/TGDK.1.1.5
Knowledge Graphs for the Life Sciences: Recent Developments, Challenges and Opportunities

Authors: Jiaoyan Chen, Hang Dong, Janna Hastings, Ernesto Jiménez-Ruiz, Vanessa López, Pierre Monnin, Catia Pesquita, Petr Škoda, and Valentina Tamma

Published in: TGDK, Volume 1, Issue 1 (2023): Special Issue on Trends in Graph Data and Knowledge. Transactions on Graph Data and Knowledge, Volume 1, Issue 1

Abstract
The term life sciences refers to the disciplines that study living organisms and life processes, and include chemistry, biology, medicine, and a range of other related disciplines. Research efforts in life sciences are heavily data-driven, as they produce and consume vast amounts of scientific data, much of which is intrinsically relational and graph-structured. The volume of data and the complexity of scientific concepts and relations referred to therein promote the application of advanced knowledge-driven technologies for managing and interpreting data, with the ultimate aim to advance scientific discovery. In this survey and position paper, we discuss recent developments and advances in the use of graph-based technologies in life sciences and set out a vision for how these technologies will impact these fields into the future. We focus on three broad topics: the construction and management of Knowledge Graphs (KGs), the use of KGs and associated technologies in the discovery of new knowledge, and the use of KGs in artificial intelligence applications to support explanations (explainable AI). We select a few exemplary use cases for each topic, discuss the challenges and open research questions within these topics, and conclude with a perspective and outlook that summarizes the overarching challenges and their potential solutions as a guide for future research.
Cite as

Jiaoyan Chen, Hang Dong, Janna Hastings, Ernesto Jiménez-Ruiz, Vanessa López, Pierre Monnin, Catia Pesquita, Petr Škoda, and Valentina Tamma. Knowledge Graphs for the Life Sciences: Recent Developments, Challenges and Opportunities. In Special Issue on Trends in Graph Data and Knowledge. Transactions on Graph Data and Knowledge (TGDK), Volume 1, Issue 1, pp. 5:1-5:33, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)

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@Article{chen_et_al:TGDK.1.1.5,
  author =	{Chen, Jiaoyan and Dong, Hang and Hastings, Janna and Jim\'{e}nez-Ruiz, Ernesto and L\'{o}pez, Vanessa and Monnin, Pierre and Pesquita, Catia and \v{S}koda, Petr and Tamma, Valentina},
  title =	{{Knowledge Graphs for the Life Sciences: Recent Developments, Challenges and Opportunities}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{5:1--5:33},
  year =	{2023},
  volume =	{1},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.1.1.5},
  URN =		{urn:nbn:de:0030-drops-194791},
  doi =		{10.4230/TGDK.1.1.5},
  annote =	{Keywords: Knowledge graphs, Life science, Knowledge discovery, Explainable AI}
}
Document
DOI: 10.4230/DagSemProc.08111.3
Personalizing XML Full Text Search in PIMENTO

Authors: Irini Fundulaki, Sihem Amer-Yahia, and Lakshmanan Laks

Published in: Dagstuhl Seminar Proceedings, Volume 8111, Ranked XML Querying (2008)

Abstract
In PIMENTO we advocate a novel approach to XML search that leverages user information to return more relevant query answers. This approach is based on formalizing {em user profiles} in terms of {em scoping rules} which are used to rewrite an input query, and of {em ordering rules} which are combined with query scoring to customize the ranking of query answers to specific users.
Cite as

Irini Fundulaki, Sihem Amer-Yahia, and Lakshmanan Laks. Personalizing XML Full Text Search in PIMENTO. In Ranked XML Querying. Dagstuhl Seminar Proceedings, Volume 8111, pp. 1-2, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2008)

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@InProceedings{fundulaki_et_al:DagSemProc.08111.3,
  author =	{Fundulaki, Irini and Amer-Yahia, Sihem and Laks, Lakshmanan},
  title =	{{Personalizing XML Full Text Search in PIMENTO}},
  booktitle =	{Ranked XML Querying},
  pages =	{1--2},
  series =	{Dagstuhl Seminar Proceedings (DagSemProc)},
  ISSN =	{1862-4405},
  year =	{2008},
  volume =	{8111},
  editor =	{Sihem Amer-Yahia and Divesh Srivastava and Gerhard Weikum},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DagSemProc.08111.3},
  URN =		{urn:nbn:de:0030-drops-15340},
  doi =		{10.4230/DagSemProc.08111.3},
  annote =	{Keywords: XML Full Text Search, Personalization}
}
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