6 Search Results for "Smith, Dennis B."


Document
Conversational Agents: A Framework for Evaluation (CAFE) (Dagstuhl Perspectives Workshop 24352)

Authors: Christine Bauer, Li Chen, Nicola Ferro, Norbert Fuhr, Avishek Anand, Timo Breuer, Guglielmo Faggioli, Ophir Frieder, Hideo Joho, Jussi Karlgren, Johannes Kiesel, Bart P. Knijnenburg, Aldo Lipani, Lien Michiels, Andrea Papenmeier, Maria Soledad Pera, Mark Sanderson, Scott Sanner, Benno Stein, Johanne R. Trippas, Karin Verspoor, and Martijn C. Willemsen

Published in: Dagstuhl Manifestos, Volume 11, Issue 1 (2025)


Abstract
During the workshop, we deeply discussed what CONversational Information ACcess (CONIAC) is and its unique features, proposing a world model abstracting it, and defined the Conversational Agents Framework for Evaluation (CAFE) for the evaluation of CONIAC systems, consisting of six major components: 1) goals of the system’s stakeholders, 2) user tasks to be studied in the evaluation, 3) aspects of the users carrying out the tasks, 4) evaluation criteria to be considered, 5) evaluation methodology to be applied, and 6) measures for the quantitative criteria chosen.

Cite as

Christine Bauer, Li Chen, Nicola Ferro, Norbert Fuhr, Avishek Anand, Timo Breuer, Guglielmo Faggioli, Ophir Frieder, Hideo Joho, Jussi Karlgren, Johannes Kiesel, Bart P. Knijnenburg, Aldo Lipani, Lien Michiels, Andrea Papenmeier, Maria Soledad Pera, Mark Sanderson, Scott Sanner, Benno Stein, Johanne R. Trippas, Karin Verspoor, and Martijn C. Willemsen. Conversational Agents: A Framework for Evaluation (CAFE) (Dagstuhl Perspectives Workshop 24352). In Dagstuhl Manifestos, Volume 11, Issue 1, pp. 19-67, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@Article{bauer_et_al:DagMan.11.1.19,
  author =	{Bauer, Christine and Chen, Li and Ferro, Nicola and Fuhr, Norbert and Anand, Avishek and Breuer, Timo and Faggioli, Guglielmo and Frieder, Ophir and Joho, Hideo and Karlgren, Jussi and Kiesel, Johannes and Knijnenburg, Bart P. and Lipani, Aldo and Michiels, Lien and Papenmeier, Andrea and Pera, Maria Soledad and Sanderson, Mark and Sanner, Scott and Stein, Benno and Trippas, Johanne R. and Verspoor, Karin and Willemsen, Martijn C.},
  title =	{{Conversational Agents: A Framework for Evaluation (CAFE) (Dagstuhl Perspectives Workshop 24352)}},
  pages =	{19--67},
  journal =	{Dagstuhl Manifestos},
  ISSN =	{2193-2433},
  year =	{2025},
  volume =	{11},
  number =	{1},
  editor =	{Bauer, Christine and Chen, Li and Ferro, Nicola and Fuhr, Norbert and Anand, Avishek and Breuer, Timo and Faggioli, Guglielmo and Frieder, Ophir and Joho, Hideo and Karlgren, Jussi and Kiesel, Johannes and Knijnenburg, Bart P. and Lipani, Aldo and Michiels, Lien and Papenmeier, Andrea and Pera, Maria Soledad and Sanderson, Mark and Sanner, Scott and Stein, Benno and Trippas, Johanne R. and Verspoor, Karin and Willemsen, Martijn C.},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DagMan.11.1.19},
  URN =		{urn:nbn:de:0030-drops-252722},
  doi =		{10.4230/DagMan.11.1.19},
  annote =	{Keywords: Conversational Agents, Evaluation, Information Access}
}
Document
It’s OK to Want to Have a Good Time

Authors: Luke Church and Mariana Marasoiu

Published in: OASIcs, Volume 134, Companion Proceedings of the 9th International Conference on the Art, Science, and Engineering of Programming (Programming 2025)


Abstract
We reflect on our decade or so of experience advising students, corporate teams and policy makers, many of whom really just want to have a good time at work and want others to as well. However, they seem to be embarrassed to say so, they dress their work in the mantle of productivity, and mostly damage it in the process. In this short opinion piece, we argue that it is long past time to say goodnight to Taylorism and ask what models of research aligned to something humane might replace it?

Cite as

Luke Church and Mariana Marasoiu. It’s OK to Want to Have a Good Time. In Companion Proceedings of the 9th International Conference on the Art, Science, and Engineering of Programming (Programming 2025). Open Access Series in Informatics (OASIcs), Volume 134, pp. 5:1-5:4, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{church_et_al:OASIcs.Programming.2025.5,
  author =	{Church, Luke and Marasoiu, Mariana},
  title =	{{It’s OK to Want to Have a Good Time}},
  booktitle =	{Companion Proceedings of the 9th International Conference on the Art, Science, and Engineering of Programming (Programming 2025)},
  pages =	{5:1--5:4},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-382-9},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{134},
  editor =	{Edwards, Jonathan and Perera, Roly and Petricek, Tomas},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.Programming.2025.5},
  URN =		{urn:nbn:de:0030-drops-242891},
  doi =		{10.4230/OASIcs.Programming.2025.5},
  annote =	{Keywords: productivity, happiness, Hegel}
}
Document
Differentiable Programming of Indexed Chemical Reaction Networks and Reaction-Diffusion Systems

Authors: Inhoo Lee, Salvador Buse, and Erik Winfree

Published in: LIPIcs, Volume 347, 31st International Conference on DNA Computing and Molecular Programming (DNA 31) (2025)


Abstract
Many molecular systems are best understood in terms of prototypical species and reactions. The central dogma and related biochemistry are rife with examples: gene i is transcribed into RNA i, which is translated into protein i; kinase n phosphorylates substrate m; protein p dimerizes with protein q. Engineered nucleic acid systems also often have this form: oligonucleotide i hybridizes to complementary oligonucleotide j; signal strand n displaces the output of seesaw gate m; hairpin p triggers the opening of target q. When there are many variants of a small number of prototypes, it can be conceptually cleaner and computationally more efficient to represent the full system in terms of indexed species (e.g. for dimerization, M_p, D_pq) and indexed reactions (M_p + M_q → D_pq). Here, we formalize the Indexed Chemical Reaction Network (ICRN) model and describe a Python software package designed to simulate such systems in the well-mixed and reaction-diffusion settings, using a differentiable programming framework originally developed for large-scale neural network models, taking advantage of GPU acceleration when available. Notably, this framework makes it straightforward to train the models’ initial conditions and rate constants to optimize a target behavior, such as matching experimental data, performing a computation, or exhibiting spatial pattern formation. The natural map of indexed chemical reaction networks onto neural network formalisms provides a tangible yet general perspective for translating concepts and techniques from the theory and practice of neural computation into the design of biomolecular systems.

Cite as

Inhoo Lee, Salvador Buse, and Erik Winfree. Differentiable Programming of Indexed Chemical Reaction Networks and Reaction-Diffusion Systems. In 31st International Conference on DNA Computing and Molecular Programming (DNA 31). Leibniz International Proceedings in Informatics (LIPIcs), Volume 347, pp. 4:1-4:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{lee_et_al:LIPIcs.DNA.31.4,
  author =	{Lee, Inhoo and Buse, Salvador and Winfree, Erik},
  title =	{{Differentiable Programming of Indexed Chemical Reaction Networks and Reaction-Diffusion Systems}},
  booktitle =	{31st International Conference on DNA Computing and Molecular Programming (DNA 31)},
  pages =	{4:1--4:23},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-399-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{347},
  editor =	{Schaeffer, Josie and Zhang, Fei},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.DNA.31.4},
  URN =		{urn:nbn:de:0030-drops-238534},
  doi =		{10.4230/LIPIcs.DNA.31.4},
  annote =	{Keywords: Differentiable Programming, Chemical Reaction Networks, Reaction-Diffusion Systems}
}
Document
A Mixed Linear and Graded Logic: Proofs, Terms, and Models

Authors: Victoria Vollmer, Danielle Marshall, Harley Eades III, and Dominic Orchard

Published in: LIPIcs, Volume 326, 33rd EACSL Annual Conference on Computer Science Logic (CSL 2025)


Abstract
Graded modal logics generalise standard modal logics via families of modalities indexed by an algebraic structure whose operations mediate between the different modalities. The graded "of-course" modality !_r captures how many times a proposition is used and has an analogous interpretation to the of-course modality from linear logic; the of-course modality from linear logic can be modelled by a linear exponential comonad and graded of-course can be modelled by a graded linear exponential comonad. Benton showed in his seminal paper on Linear/Non-Linear logic that the of-course modality can be split into two modalities connecting intuitionistic logic with linear logic, forming a symmetric monoidal adjunction. Later, Fujii et al. demonstrated that every graded comonad can be decomposed into an adjunction and a "strict action". We give a similar result to Benton, leveraging Fujii et al.’s decomposition, showing that graded modalities can be split into two modalities connecting a graded logic with a graded linear logic. We propose a sequent calculus, its proof theory and categorical model, and a natural deduction system which we show is isomorphic to the sequent calculus system. Interestingly, our system can also be understood as Linear/Non-Linear logic composed with an action that adds the grading, further illuminating the shared principles between linear logic and a class of graded modal logics.

Cite as

Victoria Vollmer, Danielle Marshall, Harley Eades III, and Dominic Orchard. A Mixed Linear and Graded Logic: Proofs, Terms, and Models. In 33rd EACSL Annual Conference on Computer Science Logic (CSL 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 326, pp. 32:1-32:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{vollmer_et_al:LIPIcs.CSL.2025.32,
  author =	{Vollmer, Victoria and Marshall, Danielle and Eades III, Harley and Orchard, Dominic},
  title =	{{A Mixed Linear and Graded Logic: Proofs, Terms, and Models}},
  booktitle =	{33rd EACSL Annual Conference on Computer Science Logic (CSL 2025)},
  pages =	{32:1--32:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-362-1},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{326},
  editor =	{Endrullis, J\"{o}rg and Schmitz, Sylvain},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CSL.2025.32},
  URN =		{urn:nbn:de:0030-drops-227892},
  doi =		{10.4230/LIPIcs.CSL.2025.32},
  annote =	{Keywords: linear logic, graded modal logic, adjoint decomposition}
}
Document
Machine Learning for Science: Bridging Data-Driven and Mechanistic Modelling (Dagstuhl Seminar 22382)

Authors: Philipp Berens, Kyle Cranmer, Neil D. Lawrence, Ulrike von Luxburg, and Jessica Montgomery

Published in: Dagstuhl Reports, Volume 12, Issue 9 (2023)


Abstract
This report documents the programme and the outcomes of Dagstuhl Seminar 22382 "Machine Learning for Science: Bridging Data-Driven and Mechanistic Modelling". Today’s scientific challenges are characterised by complexity. Interconnected natural, technological, and human systems are influenced by forces acting across time- and spatial-scales, resulting in complex interactions and emergent behaviours. Understanding these phenomena - and leveraging scientific advances to deliver innovative solutions to improve society’s health, wealth, and well-being - requires new ways of analysing complex systems. The transformative potential of AI stems from its widespread applicability across disciplines, and will only be achieved through integration across research domains. AI for science is a rendezvous point. It brings together expertise from AI and application domains; combines modelling knowledge with engineering know-how; and relies on collaboration across disciplines and between humans and machines. Alongside technical advances, the next wave of progress in the field will come from building a community of machine learning researchers, domain experts, citizen scientists, and engineers working together to design and deploy effective AI tools. This report summarises the discussions from the seminar and provides a roadmap to suggest how different communities can collaborate to deliver a new wave of progress in AI and its application for scientific discovery.

Cite as

Philipp Berens, Kyle Cranmer, Neil D. Lawrence, Ulrike von Luxburg, and Jessica Montgomery. Machine Learning for Science: Bridging Data-Driven and Mechanistic Modelling (Dagstuhl Seminar 22382). In Dagstuhl Reports, Volume 12, Issue 9, pp. 150-199, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)


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@Article{berens_et_al:DagRep.12.9.150,
  author =	{Berens, Philipp and Cranmer, Kyle and Lawrence, Neil D. and von Luxburg, Ulrike and Montgomery, Jessica},
  title =	{{Machine Learning for Science: Bridging Data-Driven and Mechanistic Modelling (Dagstuhl Seminar 22382)}},
  pages =	{150--199},
  journal =	{Dagstuhl Reports},
  ISSN =	{2192-5283},
  year =	{2023},
  volume =	{12},
  number =	{9},
  editor =	{Berens, Philipp and Cranmer, Kyle and Lawrence, Neil D. and von Luxburg, Ulrike and Montgomery, Jessica},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DagRep.12.9.150},
  URN =		{urn:nbn:de:0030-drops-178125},
  doi =		{10.4230/DagRep.12.9.150},
  annote =	{Keywords: machine learning, artificial intelligence, life sciences, physical sciences, environmental sciences, simulation, causality, modelling}
}
Document
Software Engineering for Self-Adaptive Systems: A second Research Roadmap

Authors: Rogerio de Lemos, Holger Giese, Hausi Müller, Mary Shaw, Jesper Andersson, Luciano Baresi, Basil Becker, Nelly Bencomo, Yuriy Brun, Bojan Cikic, Ron Desmarais, Schahram Dustdar, Gregor Engels, Kurt Geihs, Karl M. Goeschka, Alessandra Gorla, Vincenzo Grassi, Poala Inverardi, Gabor Karsai, Jeff Kramer, Marin Litoiu, Antonia Lopes, Jeff Magee, Sam Malek, Serge Mankovskii, Raffaela Mirandola, John Mylopoulos, Oscar Nierstrasz, Mauro Pezzè, Christian Prehofer, Wilhelm Schäfer, Wilhelm Schlichting, Bradley Schmerl, Dennis B. Smith, Joao P. Sousa, Gabriel Tamura, Ladan Tahvildari, Norha M. Villegas, Thomas Vogel, Danny Weyns, Kenny Wong, and Jochen Wuttke

Published in: Dagstuhl Seminar Proceedings, Volume 10431, Software Engineering for Self-Adaptive Systems (2011)


Abstract
The goal of this roadmap paper is to summarize the state of-the-art and identify research challenges when developing, deploying and managing self-adaptive software systems. Instead of dealing with a wide range of topics associated with the field, we focus on four essential topics of self-adaptation: design space for adaptive solutions, processes, from centralized to decentralized control, and practical run-time verification and validation. For each topic, we present an overview, suggest future directions, and focus on selected challenges. This paper complements and extends a previous roadmap on software engineering for self-adaptive systems published in 2009 covering a different set of topics, and reflecting in part on the previous paper. This roadmap is one of the many results of the Dagstuhl Seminar 10431 on Software Engineering for Self-Adaptive Systems, which took place in October 2010.

Cite as

Rogerio de Lemos, Holger Giese, Hausi Müller, Mary Shaw, Jesper Andersson, Luciano Baresi, Basil Becker, Nelly Bencomo, Yuriy Brun, Bojan Cikic, Ron Desmarais, Schahram Dustdar, Gregor Engels, Kurt Geihs, Karl M. Goeschka, Alessandra Gorla, Vincenzo Grassi, Poala Inverardi, Gabor Karsai, Jeff Kramer, Marin Litoiu, Antonia Lopes, Jeff Magee, Sam Malek, Serge Mankovskii, Raffaela Mirandola, John Mylopoulos, Oscar Nierstrasz, Mauro Pezzè, Christian Prehofer, Wilhelm Schäfer, Wilhelm Schlichting, Bradley Schmerl, Dennis B. Smith, Joao P. Sousa, Gabriel Tamura, Ladan Tahvildari, Norha M. Villegas, Thomas Vogel, Danny Weyns, Kenny Wong, and Jochen Wuttke. Software Engineering for Self-Adaptive Systems: A second Research Roadmap. In Software Engineering for Self-Adaptive Systems. Dagstuhl Seminar Proceedings, Volume 10431, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2011)


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@InProceedings{delemos_et_al:DagSemProc.10431.3,
  author =	{de Lemos, Rogerio and Giese, Holger and M\"{u}ller, Hausi and Shaw, Mary and Andersson, Jesper and Baresi, Luciano and Becker, Basil and Bencomo, Nelly and Brun, Yuriy and Cikic, Bojan and Desmarais, Ron and Dustdar, Schahram and Engels, Gregor and Geihs, Kurt and Goeschka, Karl M. and Gorla, Alessandra and Grassi, Vincenzo and Inverardi, Poala and Karsai, Gabor and Kramer, Jeff and Litoiu, Marin and Lopes, Antonia and Magee, Jeff and Malek, Sam and Mankovskii, Serge and Mirandola, Raffaela and Mylopoulos, John and Nierstrasz, Oscar and Pezz\`{e}, Mauro and Prehofer, Christian and Sch\"{a}fer, Wilhelm and Schlichting, Wilhelm and Schmerl, Bradley and Smith, Dennis B. and Sousa, Joao P. and Tamura, Gabriel and Tahvildari, Ladan and Villegas, Norha M. and Vogel, Thomas and Weyns, Danny and Wong, Kenny and Wuttke, Jochen},
  title =	{{Software Engineering for Self-Adaptive Systems:  A second Research Roadmap}},
  booktitle =	{Software Engineering for Self-Adaptive Systems},
  series =	{Dagstuhl Seminar Proceedings (DagSemProc)},
  ISSN =	{1862-4405},
  year =	{2011},
  volume =	{10431},
  editor =	{Rogerio de Lemos and Holger Giese and Hausi M\"{u}ller and Mary Shaw},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DagSemProc.10431.3},
  URN =		{urn:nbn:de:0030-drops-31561},
  doi =		{10.4230/DagSemProc.10431.3},
  annote =	{Keywords: }
}
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