5 Search Results for "Kiesel, Rafael"

Document
PACE Solver Description
DOI: 10.4230/LIPIcs.IPEC.2025.37
PACE Solver Description: Minimum Hitting Set Computation via Core-Guided MaxSAT Solving

Authors: André Schidler

Published in: LIPIcs, Volume 358, 20th International Symposium on Parameterized and Exact Computation (IPEC 2025)

Abstract
This paper describes our hybrid MaxSAT and mixed integer programming approach for finding minimum hitting sets as submitted to the 2025 PACE challenge. We also discuss hitting set specific challenges, lower bounds, preprocessing and design choices.
Cite as

André Schidler. PACE Solver Description: Minimum Hitting Set Computation via Core-Guided MaxSAT Solving. In 20th International Symposium on Parameterized and Exact Computation (IPEC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 358, pp. 37:1-37:4, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{schidler:LIPIcs.IPEC.2025.37,
  author =	{Schidler, Andr\'{e}},
  title =	{{PACE Solver Description: Minimum Hitting Set Computation via Core-Guided MaxSAT Solving}},
  booktitle =	{20th International Symposium on Parameterized and Exact Computation (IPEC 2025)},
  pages =	{37:1--37:4},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-407-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{358},
  editor =	{Agrawal, Akanksha and van Leeuwen, Erik Jan},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.IPEC.2025.37},
  URN =		{urn:nbn:de:0030-drops-251692},
  doi =		{10.4230/LIPIcs.IPEC.2025.37},
  annote =	{Keywords: hitting set, maxsat, core-guided}
}
Document
DOI: 10.4230/LIPIcs.CP.2025.17
Scalable Counting of Minimal Trap Spaces and Fixed Points in Boolean Networks

Authors: Mohimenul Kabir, Van-Giang Trinh, Samuel Pastva, and Kuldeep S Meel

Published in: LIPIcs, Volume 340, 31st International Conference on Principles and Practice of Constraint Programming (CP 2025)

Abstract
Boolean Networks (BNs) serve as a fundamental modeling framework for capturing complex dynamical systems across various domains, including systems biology, computational logic, and artificial intelligence. A crucial property of BNs is the presence of trap spaces - subspaces of the state space that, once entered, cannot be exited. Minimal trap spaces, in particular, play a significant role in analyzing the long-term behavior of BNs, making their efficient enumeration and counting essential. The fixed points in BNs are a special case of minimal trap spaces. In this work, we formulate several meaningful counting problems related to minimal trap spaces and fixed points in BNs. These problems provide valuable insights both within BN theory (e.g., in probabilistic reasoning and dynamical analysis) and in broader application areas, including systems biology, abstract argumentation, and logic programming. To address these computational challenges, we propose novel methods based on approximate answer set counting, leveraging techniques from answer set programming. Our approach efficiently approximates the number of minimal trap spaces and the number of fixed points without requiring exhaustive enumeration, making it particularly well-suited for large-scale BNs. Our experimental evaluation on an extensive and diverse set of benchmark instances shows that our methods significantly improve the feasibility of counting minimal trap spaces and fixed points, paving the way for new applications in BN analysis and beyond.
Cite as

Mohimenul Kabir, Van-Giang Trinh, Samuel Pastva, and Kuldeep S Meel. Scalable Counting of Minimal Trap Spaces and Fixed Points in Boolean Networks. In 31st International Conference on Principles and Practice of Constraint Programming (CP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 340, pp. 17:1-17:26, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{kabir_et_al:LIPIcs.CP.2025.17,
  author =	{Kabir, Mohimenul and Trinh, Van-Giang and Pastva, Samuel and Meel, Kuldeep S},
  title =	{{Scalable Counting of Minimal Trap Spaces and Fixed Points in Boolean Networks}},
  booktitle =	{31st International Conference on Principles and Practice of Constraint Programming (CP 2025)},
  pages =	{17:1--17:26},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-380-5},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{340},
  editor =	{de la Banda, Maria Garcia},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CP.2025.17},
  URN =		{urn:nbn:de:0030-drops-238780},
  doi =		{10.4230/LIPIcs.CP.2025.17},
  annote =	{Keywords: Computational systems biology, Boolean network, Fixed point, Trap space, Answer set counting, Projected counting, Abstract argumentation, Logic programming}
}
Document
DOI: 10.4230/LIPIcs.SAT.2025.8
Certifying Projected Knowledge Compilation

Authors: Randal E. Bryant, Yong Kiam Tan, and Marijn J. H. Heule

Published in: LIPIcs, Volume 341, 28th International Conference on Theory and Applications of Satisfiability Testing (SAT 2025)

Abstract
Knowledge compilers convert Boolean formulas, given in conjunctive normal form (CNF), into representations that enable efficient evaluation of unweighted and weighted model counts, as well as a variety of other useful properties. With projected knowledge compilation, the generated representation describes the restriction of the formula to a designated set of data variables, with the remaining ones eliminated by existential quantification. Projected knowledge compilation has applications in a variety of domains, including formal verification and synthesis. This paper describes a formally verified proof framework for certifying the output of a projected knowledge compiler. It builds on an earlier clausal proof framework for certifying the output of a standard knowledge compiler. Extending the framework to projected compilation requires a method to represent Skolem assignments, describing how the quantified variables can be assigned, given an assignment for the data variables. We do so by extending the representation generated by the knowledge compiler to also encode Skolem assignments. We also refine the earlier framework, moving beyond purely clausal proofs to enable scaling certification to larger formulas. We present experimental results obtained by making small modifications to the D4 projected knowledge compiler and extensions of our earlier proof generator. We detail a soundness argument stating that a compiler output that passes our certifier is logically equivalent to the quantified input formula; the soundness argument has been formally validated using the HOL4 proof assistant. The checker also ensures that the compiler output satisfies the properties required for efficient unweighted and weighted model counting. We have developed two proof checkers for the certification framework: one written in C and designed for high performance and one written in CakeML and formally verified in HOL4.
Cite as

Randal E. Bryant, Yong Kiam Tan, and Marijn J. H. Heule. Certifying Projected Knowledge Compilation. In 28th International Conference on Theory and Applications of Satisfiability Testing (SAT 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 341, pp. 8:1-8:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{bryant_et_al:LIPIcs.SAT.2025.8,
  author =	{Bryant, Randal E. and Tan, Yong Kiam and Heule, Marijn J. H.},
  title =	{{Certifying Projected Knowledge Compilation}},
  booktitle =	{28th International Conference on Theory and Applications of Satisfiability Testing (SAT 2025)},
  pages =	{8:1--8:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-381-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{341},
  editor =	{Berg, Jeremias and Nordstr\"{o}m, Jakob},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SAT.2025.8},
  URN =		{urn:nbn:de:0030-drops-237422},
  doi =		{10.4230/LIPIcs.SAT.2025.8},
  annote =	{Keywords: Knowledge Compilation, Propositional model counting, Proof checking}
}
Document
Position
DOI: 10.4230/TGDK.2.1.2
Grounding Stream Reasoning Research

Authors: Pieter Bonte, Jean-Paul Calbimonte, Daniel de Leng, Daniele Dell'Aglio, Emanuele Della Valle, Thomas Eiter, Federico Giannini, Fredrik Heintz, Konstantin Schekotihin, Danh Le-Phuoc, Alessandra Mileo, Patrik Schneider, Riccardo Tommasini, Jacopo Urbani, and Giacomo Ziffer

Published in: TGDK, Volume 2, Issue 1 (2024): Special Issue on Trends in Graph Data and Knowledge - Part 2. Transactions on Graph Data and Knowledge, Volume 2, Issue 1

Abstract
In the last decade, there has been a growing interest in applying AI technologies to implement complex data analytics over data streams. To this end, researchers in various fields have been organising a yearly event called the "Stream Reasoning Workshop" to share perspectives, challenges, and experiences around this topic. In this paper, the previous organisers of the workshops and other community members provide a summary of the main research results that have been discussed during the first six editions of the event. These results can be categorised into four main research areas: The first is concerned with the technological challenges related to handling large data streams. The second area aims at adapting and extending existing semantic technologies to data streams. The third and fourth areas focus on how to implement reasoning techniques, either considering deductive or inductive techniques, to extract new and valuable knowledge from the data in the stream. This summary is written not only to provide a crystallisation of the field, but also to point out distinctive traits of the stream reasoning community. Moreover, it also provides a foundation for future research by enumerating a list of use cases and open challenges, to stimulate others to join this exciting research area.
Cite as

Pieter Bonte, Jean-Paul Calbimonte, Daniel de Leng, Daniele Dell'Aglio, Emanuele Della Valle, Thomas Eiter, Federico Giannini, Fredrik Heintz, Konstantin Schekotihin, Danh Le-Phuoc, Alessandra Mileo, Patrik Schneider, Riccardo Tommasini, Jacopo Urbani, and Giacomo Ziffer. Grounding Stream Reasoning Research. In Special Issue on Trends in Graph Data and Knowledge - Part 2. Transactions on Graph Data and Knowledge (TGDK), Volume 2, Issue 1, pp. 2:1-2:47, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@Article{bonte_et_al:TGDK.2.1.2,
  author =	{Bonte, Pieter and Calbimonte, Jean-Paul and de Leng, Daniel and Dell'Aglio, Daniele and Della Valle, Emanuele and Eiter, Thomas and Giannini, Federico and Heintz, Fredrik and Schekotihin, Konstantin and Le-Phuoc, Danh and Mileo, Alessandra and Schneider, Patrik and Tommasini, Riccardo and Urbani, Jacopo and Ziffer, Giacomo},
  title =	{{Grounding Stream Reasoning Research}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{2:1--2:47},
  ISSN =	{2942-7517},
  year =	{2024},
  volume =	{2},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.2.1.2},
  URN =		{urn:nbn:de:0030-drops-198597},
  doi =		{10.4230/TGDK.2.1.2},
  annote =	{Keywords: Stream Reasoning, Stream Processing, RDF streams, Streaming Linked Data, Continuous query processing, Temporal Logics, High-performance computing, Databases}
}
Document
PACE Solver Description
DOI: 10.4230/LIPIcs.IPEC.2022.32
PACE Solver Description: DAGer - Cutting out Cycles with MaxSAT

Authors: Rafael Kiesel and André Schidler

Published in: LIPIcs, Volume 249, 17th International Symposium on Parameterized and Exact Computation (IPEC 2022)

Abstract
We describe the solver DAGer for the Directed Feedback Vertex Set (DFVS) problem, as it was submitted to the exact track of the 2022 PACE Challenge. Our approach first applies a wide range of preprocessing techniques involving both well-known data reductions for DFVS as well as non-trivial adaptations from the vertex cover problem. For the actual solving, we found that using a MaxSAT solver with incremental constraints achieves a good performance.
Cite as

Rafael Kiesel and André Schidler. PACE Solver Description: DAGer - Cutting out Cycles with MaxSAT. In 17th International Symposium on Parameterized and Exact Computation (IPEC 2022). Leibniz International Proceedings in Informatics (LIPIcs), Volume 249, pp. 32:1-32:4, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2022)

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@InProceedings{kiesel_et_al:LIPIcs.IPEC.2022.32,
  author =	{Kiesel, Rafael and Schidler, Andr\'{e}},
  title =	{{PACE Solver Description: DAGer - Cutting out Cycles with MaxSAT}},
  booktitle =	{17th International Symposium on Parameterized and Exact Computation (IPEC 2022)},
  pages =	{32:1--32:4},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-260-0},
  ISSN =	{1868-8969},
  year =	{2022},
  volume =	{249},
  editor =	{Dell, Holger and Nederlof, Jesper},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.IPEC.2022.32},
  URN =		{urn:nbn:de:0030-drops-173885},
  doi =		{10.4230/LIPIcs.IPEC.2022.32},
  annote =	{Keywords: Directed Feeback Vertex Set, Data Reductions, Incremental MaxSAT}
}
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