22 Search Results for "Lin, Guohui"

Document
Research
DOI: 10.4230/TGDK.4.1.4
Native Provenance Computation for Federated and Non-Federated SPARQL Queries

Authors: Zubaria Asma, Daniel Hernández, Luis Galárraga, Giorgos Flouris, Irini Fundulaki, and Katja Hose

Published in: TGDK, Volume 4, Issue 1 (2026). Transactions on Graph Data and Knowledge, Volume 4, Issue 1

Abstract
The popularity of knowledge graphs (KGs) owes credit to their flexible data model, which is suitable for data integration from multiple sources. Several KG-based applications, such as trust assessment, view maintenance, or data valuation on dynamic data, rely on the ability to compute provenance explanations for query results. This need becomes more urgent in federated query processing systems, which allow the online consumption of heterogeneous and decentralized Web data. However, the problem of computing and interacting with provenance has received little attention, especially in the federated setting. On those grounds, this paper introduces the NPCS (Native Provenance Computation for SPARQL) approach, and its federated variant Fed-NPCS, that compute provenance for SPARQL query results. Both approaches build upon spm-semirings to annotate the results of monotonic and non-monotonic SPARQL queries with their provenance. Due to their reliance on query rewriting techniques, the approaches are directly applicable to already deployed SPARQL engines and federations using different reification schemes, including RDF-star. Our experimental evaluation shows that our novel query rewriting approach brings significant run-time improvements w.r.t. the state-of-the-art across both centralized and federated settings. In centralized settings, our tests on two popular SPARQL engines (GraphDB and Stardog) reveal substantial runtime gains over existing query rewriting solutions, enabling scalability to RDF graphs with billions of triples. In federated settings, our experiments on the FedShop benchmark with GraphDB show the viability of Fed-NPCS for federations with up to 200 sources.
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Zubaria Asma, Daniel Hernández, Luis Galárraga, Giorgos Flouris, Irini Fundulaki, and Katja Hose. Native Provenance Computation for Federated and Non-Federated SPARQL Queries. In Transactions on Graph Data and Knowledge (TGDK), Volume 4, Issue 1, pp. 4:1-4:43, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@Article{asma_et_al:TGDK.4.1.4,
  author =	{Asma, Zubaria and Hern\'{a}ndez, Daniel and Gal\'{a}rraga, Luis and Flouris, Giorgos and Fundulaki, Irini and Hose, Katja},
  title =	{{Native Provenance Computation for Federated and Non-Federated SPARQL Queries}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{4:1--4:43},
  ISSN =	{2942-7517},
  year =	{2026},
  volume =	{4},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.4.1.4},
  URN =		{urn:nbn:de:0030-drops-259642},
  doi =		{10.4230/TGDK.4.1.4},
  annote =	{Keywords: native provenance computation, federated SPARQL queries, data provenance, NPCS, Fed-NPCS}
}
Document
DOI: 10.4230/LITES.11.1.1
A Survey of Real-Time Support, Analysis, and Advancements in ROS 2

Authors: Daniel Casini, Jian-Jia Chen, Jing Li, Federico Reghenzani, and Harun Teper

Published in: LITES, Volume 11, Issue 1 (2026). Leibniz Transactions on Embedded Systems, Volume 11, Issue 1

Abstract
The Robot Operating System 2 (ROS 2) has emerged as a relevant middleware framework for robotic applications, offering modularity, distributed execution, and communication. In the last six years, ROS 2 has drawn increasing attention from the real-time systems community and industry. This survey presents a comprehensive overview of research efforts that analyze, enhance, and extend ROS 2 to support real-time execution. We first provide a detailed description of the internal scheduling mechanisms of ROS 2 and its layered architecture, including the interaction with DDS-based communication and other communication middleware. We then review key contributions from the literature, covering timing analysis for both single- and multi-threaded executors, metrics such as response time, reaction time, and data age, and different communication modes. The survey also discusses community-driven enhancements to the ROS 2 runtime, including new executor algorithm designs, real-time GPU management, and microcontroller support via micro-ROS. Furthermore, we summarize techniques for bounding DDS communication delays, message filters, and profiling tools that have been developed to support analysis and experimentation. To help systematize this growing body of work, we introduce taxonomies that classify the surveyed contributions based on different criteria. This survey aims to guide both researchers and practitioners in understanding and improving the real-time capabilities of ROS 2.
Cite as

Daniel Casini, Jian-Jia Chen, Jing Li, Federico Reghenzani, and Harun Teper. A Survey of Real-Time Support, Analysis, and Advancements in ROS 2. In LITES, Volume 11, Issue 1 (2026). Leibniz Transactions on Embedded Systems, Volume 11, Issue 1, pp. 1:1-1:37, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@Article{casini_et_al:LITES.11.1.1,
  author =	{Casini, Daniel and Chen, Jian-Jia and Li, Jing and Reghenzani, Federico and Teper, Harun},
  title =	{{A Survey of Real-Time Support, Analysis, and Advancements in ROS 2}},
  journal =	{Leibniz Transactions on Embedded Systems},
  pages =	{1:1--1:37},
  ISSN =	{2199-2002},
  year =	{2026},
  volume =	{11},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LITES.11.1.1},
  URN =		{urn:nbn:de:0030-drops-257914},
  doi =		{10.4230/LITES.11.1.1},
  annote =	{Keywords: ROS 2, middleware, real-time, timing predictability, publish-subscribe}
}
Document
DOI: 10.4230/LIPIcs.FUN.2026.24
On the Complexity of the Maker-Breaker Happy Vertex Game

Authors: Mathieu Hilaire, Perig Montfort, and Nacim Oijid

Published in: LIPIcs, Volume 366, 13th International Conference on Fun with Algorithms (FUN 2026)

Abstract
Given a c-colored graph G, a vertex v of G is said to be happy if it has the same color as all its neighbors. The notion of happy vertices was introduced by Zhang and Li [Peng Zhang and Angsheng Li, 2015] to compute the homophily of a graph. Eto, Fujimoto, Kiya, Matsushita, Miyano, Murao and Saitoh [Hiroshi Eto et al., 2025] introduced the Maker-Maker version of the Happy vertex game, where two players compete to claim more happy vertices than their opponent. We introduce here the Maker-Breaker happy vertex game: two players, Maker and Breaker, alternately color the vertices of a graph with their respective colors. Maker aims to maximize the number of happy vertices at the end, while Breaker aims to prevent her. This game is also a scoring version of the Maker-Breaker domination game introduced by Duchene, Gledel, Parreau and Renault [Duchene et al., 2020], as a happy vertex corresponds exactly to a vertex that is not dominated in the domination game. Therefore, this game is a very natural game on graphs and can be studied within the scope of scoring positional games [Bagan et al., 2024]. We initiate here the complexity study of this game, by proving that computing its score is PSPACE-complete on trees, NP-hard on caterpillars, and polynomial on subdivided stars. Finally, we provide the exact value of the score on graphs of maximum degree 2, and we provide an FPT-algorithm to compute the score on graphs of bounded neighborhood diversity. An important contribution of the paper is that, to achieve our hardness results, we introduce a new type of incidence graph called the literal-clause incidence graph for 2-SAT formulas. We prove that QMAX 2-SAT remains PSPACE-complete even if this graph is acyclic, and that MAX 2-SAT remains NP-complete, even if this graph is acyclic and has maximum degree 2, i.e. is a union of paths. We demonstrate the importance of this contribution by proving that Incidence, the scoring positional game played on a graph is also PSPACE-complete when restricted to forests.
Cite as

Mathieu Hilaire, Perig Montfort, and Nacim Oijid. On the Complexity of the Maker-Breaker Happy Vertex Game. In 13th International Conference on Fun with Algorithms (FUN 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 366, pp. 24:1-24:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{hilaire_et_al:LIPIcs.FUN.2026.24,
  author =	{Hilaire, Mathieu and Montfort, Perig and Oijid, Nacim},
  title =	{{On the Complexity of the Maker-Breaker Happy Vertex Game}},
  booktitle =	{13th International Conference on Fun with Algorithms (FUN 2026)},
  pages =	{24:1--24:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-417-8},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{366},
  editor =	{Iacono, John},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.FUN.2026.24},
  URN =		{urn:nbn:de:0030-drops-257434},
  doi =		{10.4230/LIPIcs.FUN.2026.24},
  annote =	{Keywords: Maker-Breaker game, Domination game, happy vertex game, scoring game, complexity}
}
Document
Invited Paper
DOI: 10.4230/OASIcs.RW.2024/2025.8
ASP Essentials: Modelling and Efficient Solving (Invited Paper)

Authors: Giuseppe Mazzotta and Francesco Ricca

Published in: OASIcs, Volume 138, Joint Proceedings of the 20th and 21st Reasoning Web Summer Schools (RW 2024 & RW 2025)

Abstract
Answer Set Programming (ASP) is a logic-based Knowledge Representation and Reasoning (KRR) paradigm that facilitates rapid prototyping of solutions for complex problems. It is particularly effective for tackling Deep Reasoning tasks involving exponentially large search spaces, such as combinatorial search and optimization. While getting started with ASP is relatively easy, mastering its advanced constructs and scaling solutions to real-world problem sizes can be challenging. This paper provides an introduction to ASP, guiding the reader from the fundamentals of the language to the application of programming methodologies and the computation of answer sets. Beyond the core framework, the paper also examines selected extensions of ASP that enable the modeling of complex problems, as well as compilation techniques designed to enhance solving efficiency. Furthermore, it mentions some recent tools that combine ASP with LLMs.
Cite as

Giuseppe Mazzotta and Francesco Ricca. ASP Essentials: Modelling and Efficient Solving (Invited Paper). In Joint Proceedings of the 20th and 21st Reasoning Web Summer Schools (RW 2024 & RW 2025). Open Access Series in Informatics (OASIcs), Volume 138, pp. 8:1-8:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{mazzotta_et_al:OASIcs.RW.2024/2025.8,
  author =	{Mazzotta, Giuseppe and Ricca, Francesco},
  title =	{{ASP Essentials: Modelling and Efficient Solving}},
  booktitle =	{Joint Proceedings of the 20th and 21st Reasoning Web Summer Schools (RW 2024 \& RW 2025)},
  pages =	{8:1--8:21},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-405-5},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{138},
  editor =	{Artale, Alessandro and Bienvenu, Meghyn and Garc{\'\i}a, Yazm{\'\i}n Ib\'{a}\~{n}ez and Murlak, Filip},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.RW.2024/2025.8},
  URN =		{urn:nbn:de:0030-drops-250539},
  doi =		{10.4230/OASIcs.RW.2024/2025.8},
  annote =	{Keywords: Answer Set Programming, ASP with Quantifiers, Grounding Bottleneck, Compilation-based ASP solving, Neurosymbolic AI, LLMs}
}
Document
DOI: 10.4230/LIPIcs.ISAAC.2025.49
Maximizing Social Welfare Among EF1 Allocations at the Presence of Two Types of Agents

Authors: Jiaxuan Ma, Yong Chen, Guangting Chen, Mingyang Gong, Guohui Lin, and An Zhang

Published in: LIPIcs, Volume 359, 36th International Symposium on Algorithms and Computation (ISAAC 2025)

Abstract
We study the fair allocation of indivisible items to n agents to maximize the utilitarian social welfare, where the fairness criterion is envy-free up to one item and there are only two different utility functions shared by the agents. We present a 2-approximation algorithm when the two utility functions are normalized, improving the previous best ratio of 16 √n shown for general normalized utility functions; thus this constant ratio approximation algorithm confirms the APX-completeness in this special case previously shown APX-hard. When there are only three agents, i.e., n = 3, the previous best ratio is 3 shown for general utility functions, and we present an improved and tight 5/3-approximation algorithm when the two utility functions are normalized, and a best possible and tight 2-approximation algorithm when the two utility functions are unnormalized.
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Jiaxuan Ma, Yong Chen, Guangting Chen, Mingyang Gong, Guohui Lin, and An Zhang. Maximizing Social Welfare Among EF1 Allocations at the Presence of Two Types of Agents. In 36th International Symposium on Algorithms and Computation (ISAAC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 359, pp. 49:1-49:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{ma_et_al:LIPIcs.ISAAC.2025.49,
  author =	{Ma, Jiaxuan and Chen, Yong and Chen, Guangting and Gong, Mingyang and Lin, Guohui and Zhang, An},
  title =	{{Maximizing Social Welfare Among EF1 Allocations at the Presence of Two Types of Agents}},
  booktitle =	{36th International Symposium on Algorithms and Computation (ISAAC 2025)},
  pages =	{49:1--49:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-408-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{359},
  editor =	{Chen, Ho-Lin and Hon, Wing-Kai and Tsai, Meng-Tsung},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2025.49},
  URN =		{urn:nbn:de:0030-drops-249570},
  doi =		{10.4230/LIPIcs.ISAAC.2025.49},
  annote =	{Keywords: Fair allocation, utilitarian social welfare, envy-free up to one item, envy-cycle elimination, round robin, approximation algorithm}
}
Document
DOI: 10.4230/LIPIcs.WABI.2025.3
Approximability of Longest Run Subsequence and Complementary Minimization Problems

Authors: Yuichi Asahiro, Mingyang Gong, Jesper Jansson, Guohui Lin, Sichen Lu, Eiji Miyano, Hirotaka Ono, Toshiki Saitoh, and Shunichi Tanaka

Published in: LIPIcs, Volume 344, 25th International Conference on Algorithms for Bioinformatics (WABI 2025)

Abstract
We study the polynomial-time approximability of the Longest Run Subsequence problem (LRS for short) and its complementary minimization variant Minimum Run Subsequence Deletion problem (MRSD for short). For a string S = s₁ ⋯ s_n over an alphabet Σ, a subsequence S' of S is S' = s_{i₁} ⋯ s_{i_p}, such that 1 ≤ i₁ < i₂ < … < i_p ≤ |S|. A run of a symbol σ ∈ Σ in S is a maximal substring of consecutive occurrences of σ. A run subsequence S' of S is a subsequence of S in which every symbol σ ∈ Σ occurs in at most one run. The co-subsequence ̅{S'} of the subsequence S' = s_{i₁} ⋯ s_{i_p} in S is the subsequence obtained by deleting all the characters in S' from S, i.e., ̅{S'} = s_{j₁} ⋯ s_{j_{n-p}} such that j₁ < j₂ < … < j_{n-p} and {j₁, …, j_{n-p}} = {1, …, n}⧵ {i₁, …, i_p}. Given a string S, the goal of LRS (resp., MRSD) is to find a run subsequence S^* of S such that the length |S^*| is maximized (resp., the number | ̅{S^*}| of deleted symbols from S is minimized) over all the run subsequences of S. Let k be the maximum number of symbol occurrences in the input S. It is known that LRS and MRSD are APX-hard even if k = 2. In this paper, we show that LRS can be approximated in polynomial time within factors of (k+2)/3 for k = 2 or 3, and 2(k+1)/5 for every k ≥ 4. Furthermore, we show that MRSD can be approximated in linear time within a factor of (k+4)/4 if k is even and (k+3)/4 if k is odd.
Cite as

Yuichi Asahiro, Mingyang Gong, Jesper Jansson, Guohui Lin, Sichen Lu, Eiji Miyano, Hirotaka Ono, Toshiki Saitoh, and Shunichi Tanaka. Approximability of Longest Run Subsequence and Complementary Minimization Problems. In 25th International Conference on Algorithms for Bioinformatics (WABI 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 344, pp. 3:1-3:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{asahiro_et_al:LIPIcs.WABI.2025.3,
  author =	{Asahiro, Yuichi and Gong, Mingyang and Jansson, Jesper and Lin, Guohui and Lu, Sichen and Miyano, Eiji and Ono, Hirotaka and Saitoh, Toshiki and Tanaka, Shunichi},
  title =	{{Approximability of Longest Run Subsequence and Complementary Minimization Problems}},
  booktitle =	{25th International Conference on Algorithms for Bioinformatics (WABI 2025)},
  pages =	{3:1--3:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-386-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{344},
  editor =	{Brejov\'{a}, Bro\v{n}a and Patro, Rob},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2025.3},
  URN =		{urn:nbn:de:0030-drops-239290},
  doi =		{10.4230/LIPIcs.WABI.2025.3},
  annote =	{Keywords: Longest run subsequence, minimum run subsequence deletion, approximation algorithm}
}
Document
DOI: 10.4230/LIPIcs.GIScience.2025.13
Assessing Map Reproducibility with Visual Question-Answering: An Empirical Evaluation

Authors: Eftychia Koukouraki, Auriol Degbelo, and Christian Kray

Published in: LIPIcs, Volume 346, 13th International Conference on Geographic Information Science (GIScience 2025)

Abstract
Reproducibility is a key principle of the modern scientific method. Maps, as an important means of communicating scientific results in GIScience and across disciplines, should be reproducible. Currently, map reproducibility assessment is done manually, which makes the assessment process tedious and time-consuming, ultimately limiting its efficiency. Hence, this work explores the extent to which Visual Question-Answering (VQA) can be used to automate some tasks relevant to map reproducibility assessment. We selected five state-of-the-art vision language models (VLMs) and followed a three-step approach to evaluate their ability to discriminate between maps and other images, interpret map content, and compare two map images using VQA. Our results show that current VLMs already possess map-reading capabilities and demonstrate understanding of spatial concepts, such as cardinal directions, geographic scope, and legend interpretation. Our paper demonstrates the potential of using VQA to support reproducibility assessment and highlights the outstanding issues that need to be addressed to achieve accurate, trustworthy map descriptions, thereby reducing the time and effort required by human evaluators.
Cite as

Eftychia Koukouraki, Auriol Degbelo, and Christian Kray. Assessing Map Reproducibility with Visual Question-Answering: An Empirical Evaluation. In 13th International Conference on Geographic Information Science (GIScience 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 346, pp. 13:1-13:12, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{koukouraki_et_al:LIPIcs.GIScience.2025.13,
  author =	{Koukouraki, Eftychia and Degbelo, Auriol and Kray, Christian},
  title =	{{Assessing Map Reproducibility with Visual Question-Answering: An Empirical Evaluation}},
  booktitle =	{13th International Conference on Geographic Information Science (GIScience 2025)},
  pages =	{13:1--13:12},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-378-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{346},
  editor =	{Sila-Nowicka, Katarzyna and Moore, Antoni and O'Sullivan, David and Adams, Benjamin and Gahegan, Mark},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.GIScience.2025.13},
  URN =		{urn:nbn:de:0030-drops-238426},
  doi =		{10.4230/LIPIcs.GIScience.2025.13},
  annote =	{Keywords: map comparison, computational reproducibility, visual question answering, large language models, GeoAI}
}
Document
Research
DOI: 10.4230/OASIcs.Grossi.20
Subsequence-Based Indices for Genome Sequence Analysis

Authors: Giovanni Buzzega, Alessio Conte, Veronica Guerrini, Giulia Punzi, Giovanna Rosone, and Lorenzo Tattini

Published in: OASIcs, Volume 132, From Strings to Graphs, and Back Again: A Festschrift for Roberto Grossi's 60th Birthday (2025)

Abstract
Compact indices are a fundamental tool in string analysis, even more so in bioinformatics, where genomic sequences can reach billions in length. This paper presents some recent results in which Roberto Grossi has been involved, showing how some of these indices do more than just efficiently represent data, but rather are able to bring out salient information within it, which can be exploited for their downstream analysis. Specifically, we first review a recently-introduced method [Guerrini et al., 2023] that employs the Burrows-Wheeler Transform to build reasonably accurate phylogenetic trees in an assembly-free scenario. We then describe a recent practical tool [Buzzega et al., 2025] for indexing Maximal Common Subsequences between strings, which can enable analysis of genomic sequence similarity. Experimentally, we show that the results produced by the one index are consistent with the expectations about the results of the other index.
Cite as

Giovanni Buzzega, Alessio Conte, Veronica Guerrini, Giulia Punzi, Giovanna Rosone, and Lorenzo Tattini. Subsequence-Based Indices for Genome Sequence Analysis. In From Strings to Graphs, and Back Again: A Festschrift for Roberto Grossi's 60th Birthday. Open Access Series in Informatics (OASIcs), Volume 132, pp. 20:1-20:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{buzzega_et_al:OASIcs.Grossi.20,
  author =	{Buzzega, Giovanni and Conte, Alessio and Guerrini, Veronica and Punzi, Giulia and Rosone, Giovanna and Tattini, Lorenzo},
  title =	{{Subsequence-Based Indices for Genome Sequence Analysis}},
  booktitle =	{From Strings to Graphs, and Back Again: A Festschrift for Roberto Grossi's 60th Birthday},
  pages =	{20:1--20:21},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-391-1},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{132},
  editor =	{Conte, Alessio and Marino, Andrea and Rosone, Giovanna and Vitter, Jeffrey Scott},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.Grossi.20},
  URN =		{urn:nbn:de:0030-drops-238199},
  doi =		{10.4230/OASIcs.Grossi.20},
  annote =	{Keywords: String Indices, Burrows-Wheeler Transform, Maximal Common Subsequences, Sequence Analysis, Phylogeny}
}
Document
DOI: 10.4230/LIPIcs.CPM.2025.1
Representing Paths in Digraphs

Authors: Riccardo Dondi and Alexandru Popa

Published in: LIPIcs, Volume 331, 36th Annual Symposium on Combinatorial Pattern Matching (CPM 2025)

Abstract
In this contribution we consider two combinatorial problems related to graph string matching, motivated by recent approaches in computational genomics. Given a DAG where each node is labeled by a symbol, the problems aim to find a path in the DAG whose nodes contain all (or the maximum number of) symbols of the alphabet. We introduce a decision problem, Σ-Representing Path, that asks whether there exists a path that contains all the symbols of the alphabet, and an optimization problem, called Maximum Representing Path, that asks for a path that contains the maximum number of symbols. We analyze the complexity of the problems, showing the NP-completeness of {Σ-Representing Path} when each symbol labels at most three nodes in the DAG, and showing the APX-hardness of Maximum Representing Path when each symbol labels at most two nodes in the DAG. We complement the first result by giving a polynomial-time algorithm for Σ-Representing Path when each symbol labels at most two nodes in the DAG. Then we investigate the parameterized complexity of the two problems when the DAG has a limited distance from a set of disjoint paths and we show that both problems are W[1]-hard for this parameter. We consider the approximation of Maximum Representing Path, giving an approximation algorithm of factor √OPT, where OPT is the value of an optimal solution of the problem. We also show that Maximum Representing Path cannot be approximated within factor e/(e-1) - α, for any constant α > 0, unless NP ⊆ DTIME(|V|^{O(log log |V|)}) (V is the set of nodes of the DAG).
Cite as

Riccardo Dondi and Alexandru Popa. Representing Paths in Digraphs. In 36th Annual Symposium on Combinatorial Pattern Matching (CPM 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 331, pp. 1:1-1:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{dondi_et_al:LIPIcs.CPM.2025.1,
  author =	{Dondi, Riccardo and Popa, Alexandru},
  title =	{{Representing Paths in Digraphs}},
  booktitle =	{36th Annual Symposium on Combinatorial Pattern Matching (CPM 2025)},
  pages =	{1:1--1:15},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-369-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{331},
  editor =	{Bonizzoni, Paola and M\"{a}kinen, Veli},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2025.1},
  URN =		{urn:nbn:de:0030-drops-230954},
  doi =		{10.4230/LIPIcs.CPM.2025.1},
  annote =	{Keywords: Graph String Matching, Computational Complexity, Parameterized Complexity, Algorithms}
}
Document
DOI: 10.4230/LIPIcs.FORC.2025.4
Hardness and Approximation Algorithms for Balanced Districting Problems

Authors: Prathamesh Dharangutte, Jie Gao, Shang-En Huang, and Fang-Yi Yu

Published in: LIPIcs, Volume 329, 6th Symposium on Foundations of Responsible Computing (FORC 2025)

Abstract
We introduce and study the problem of balanced districting, where given an undirected graph with vertices carrying two types of weights (different population, resource types, etc) the goal is to maximize the total weights covered in vertex disjoint districts such that each district is a star or (in general) a connected induced subgraph with the two weights to be balanced. This problem is strongly motivated by political redistricting, where contiguity, population balance, and compactness are essential. We provide hardness and approximation algorithms for this problem. In particular, we show NP-hardness for an approximation better than n^{1/2-δ} for any constant δ > 0 in general graphs even when the districts are star graphs, as well as NP-hardness on complete graphs, tree graphs, planar graphs and other restricted settings. On the other hand, we develop an algorithm for balanced star districting that gives an O(√n)-approximation on any graph (which is basically tight considering matching hardness of approximation results), an O(log n) approximation on planar graphs with extensions to minor-free graphs. Our algorithm uses a modified Whack-a-Mole algorithm [Bhattacharya, Kiss, and Saranurak, SODA 2023] to find a sparse solution of a fractional packing linear program (despite exponentially many variables) which requires a new design of a separation oracle specific for our balanced districting problem. To turn the fractional solution to a feasible integer solution, we adopt the randomized rounding algorithm by [Chan and Har-Peled, SoCG 2009]. To get a good approximation ratio of the rounding procedure, a crucial element in the analysis is the balanced scattering separators for planar graphs and minor-free graphs - separators that can be partitioned into a small number of k-hop independent sets for some constant k - which may find independent interest in solving other packing style problems. Further, our algorithm is versatile - the very same algorithm can be analyzed in different ways on various graph classes, which leads to class-dependent approximation ratios. We also provide a FPTAS algorithm for complete graphs and tree graphs, as well as greedy algorithms and approximation ratios when the district cardinality is bounded, the graph has bounded degree or the weights are binary. We refer the readers to the full version of the paper for complete set of results and proofs.
Cite as

Prathamesh Dharangutte, Jie Gao, Shang-En Huang, and Fang-Yi Yu. Hardness and Approximation Algorithms for Balanced Districting Problems. In 6th Symposium on Foundations of Responsible Computing (FORC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 329, pp. 4:1-4:24, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{dharangutte_et_al:LIPIcs.FORC.2025.4,
  author =	{Dharangutte, Prathamesh and Gao, Jie and Huang, Shang-En and Yu, Fang-Yi},
  title =	{{Hardness and Approximation Algorithms for Balanced Districting Problems}},
  booktitle =	{6th Symposium on Foundations of Responsible Computing (FORC 2025)},
  pages =	{4:1--4:24},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-367-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{329},
  editor =	{Bun, Mark},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.FORC.2025.4},
  URN =		{urn:nbn:de:0030-drops-231310},
  doi =		{10.4230/LIPIcs.FORC.2025.4},
  annote =	{Keywords: Approximation algorithms, algorithmic fairness}
}
Document
DOI: 10.4230/LIPIcs.SAND.2025.9
Spanner Enumeration for Temporal Graphs

Authors: Kazuhiro Kurita, Andrea Marino, Jason Schoeters, and Takeaki Uno

Published in: LIPIcs, Volume 330, 4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025)

Abstract
A spanner of a temporal graph is a subset of edges that preserves connectivity over time between vertices. A minimal spanner is one in which no additional edges can be removed without breaking this connectivity. Our focus is on enumerating minimal spanners for a given temporal graph. We explore several variations of this problem based on the type of connectivity that must be maintained, ranging from one-to-all connectivity to one-to-all-to-one, many-to-all, and finally all-to-all connectivity. We establish that these problems become progressively harder: (i) We present a polynomial-delay enumeration algorithm for one-to-all connectivity; (ii) We prove Dual-hardness for both one-to-all-to-one and many-to-all connectivity, even in the restricted case of two-to-all; (iii) Finally, for all-to-all connectivity, we show that enumeration cannot be performed in output-polynomial time unless P = NP.
Cite as

Kazuhiro Kurita, Andrea Marino, Jason Schoeters, and Takeaki Uno. Spanner Enumeration for Temporal Graphs. In 4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 330, pp. 9:1-9:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{kurita_et_al:LIPIcs.SAND.2025.9,
  author =	{Kurita, Kazuhiro and Marino, Andrea and Schoeters, Jason and Uno, Takeaki},
  title =	{{Spanner Enumeration for Temporal Graphs}},
  booktitle =	{4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025)},
  pages =	{9:1--9:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-368-3},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{330},
  editor =	{Meeks, Kitty and Scheideler, Christian},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SAND.2025.9},
  URN =		{urn:nbn:de:0030-drops-230621},
  doi =		{10.4230/LIPIcs.SAND.2025.9},
  annote =	{Keywords: temporal graphs, temporal spanners, one-to-all connectivity, all-to-all connectivity enumeration, NP-completeness, Dual-hardness, binary partition tree, flashlight search, polynomial delay}
}
Document
DOI: 10.4230/LIPIcs.ICDT.2025.31
On Deciding the Data Complexity of Answering Linear Monadic Datalog Queries with LTL Operators

Authors: Alessandro Artale, Anton Gnatenko, Vladislav Ryzhikov, and Michael Zakharyaschev

Published in: LIPIcs, Volume 328, 28th International Conference on Database Theory (ICDT 2025)

Abstract
Our concern is the data complexity of answering linear monadic datalog queries whose atoms in the rule bodies can be prefixed by operators of linear temporal logic LTL. We first observe that, for data complexity, answering any connected query with operators ○/○- (at the next/previous moment) is either in AC⁰, or in ACC⁰\AC⁰, or NC¹-complete, or L-hard and in NL. Then we show that the problem of deciding L-hardness of answering such queries is PSpace-complete, while checking membership in the classes AC⁰ and ACC⁰ as well as NC¹-completeness can be done in ExpSpace. Finally, we prove that membership in AC⁰ or in ACC⁰, NC¹-completeness, and L-hardness are undecidable for queries with operators ◇/◇- (sometime in the future/past) provided that NC¹ ≠ NL and L ≠ NL.
Cite as

Alessandro Artale, Anton Gnatenko, Vladislav Ryzhikov, and Michael Zakharyaschev. On Deciding the Data Complexity of Answering Linear Monadic Datalog Queries with LTL Operators. In 28th International Conference on Database Theory (ICDT 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 328, pp. 31:1-31:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{artale_et_al:LIPIcs.ICDT.2025.31,
  author =	{Artale, Alessandro and Gnatenko, Anton and Ryzhikov, Vladislav and Zakharyaschev, Michael},
  title =	{{On Deciding the Data Complexity of Answering Linear Monadic Datalog Queries with LTL Operators}},
  booktitle =	{28th International Conference on Database Theory (ICDT 2025)},
  pages =	{31:1--31:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-364-5},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{328},
  editor =	{Roy, Sudeepa and Kara, Ahmet},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICDT.2025.31},
  URN =		{urn:nbn:de:0030-drops-229723},
  doi =		{10.4230/LIPIcs.ICDT.2025.31},
  annote =	{Keywords: Linear monadic datalog, linear temporal logic, data complexity}
}
Document
DOI: 10.4230/LIPIcs.ISAAC.2024.20
Revisit the Scheduling Problem with Calibrations

Authors: Lin Chen, Yixiong Gao, Minming Li, Guohui Lin, and Kai Wang

Published in: LIPIcs, Volume 322, 35th International Symposium on Algorithms and Computation (ISAAC 2024)

Abstract
The research about scheduling with calibrations was initiated from the Integrated Stockpile Evaluation (ISE) program which tests nuclear weapons periodically. The tests for these weapons require calibrations that are expensive in the monetary sense. This model has many industrial applications where the machines need to be calibrated periodically to ensure high-quality products, including robotics and digital cameras. In 2013, Bender et al. (SPAA '13) proposed a theoretical framework for the ISE problem. In this model, a machine can only be trusted to run a job when it is calibrated and the calibration remains valid for a time period of length T, after which it must be recalibrated before running more jobs. The objective is to find a schedule that completes all jobs by their deadlines and minimizes the total number of calibrations. In this paper, we study the scheduling problem with calibrations on multiple parallel machines where we consider unit-time processing jobs with release times and deadlines. We propose a dynamic programming algorithm with polynomial running time when the number of machines is constant. Then, we propose another dynamic programming approach with polynomial running time when the length of the calibrated period is constant. Also, we propose a PTAS, that is, for any constant ε > 0, we give a (1+ε) - approximation solution with m machines.
Cite as

Lin Chen, Yixiong Gao, Minming Li, Guohui Lin, and Kai Wang. Revisit the Scheduling Problem with Calibrations. In 35th International Symposium on Algorithms and Computation (ISAAC 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 322, pp. 20:1-20:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@InProceedings{chen_et_al:LIPIcs.ISAAC.2024.20,
  author =	{Chen, Lin and Gao, Yixiong and Li, Minming and Lin, Guohui and Wang, Kai},
  title =	{{Revisit the Scheduling Problem with Calibrations}},
  booktitle =	{35th International Symposium on Algorithms and Computation (ISAAC 2024)},
  pages =	{20:1--20:15},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-354-6},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{322},
  editor =	{Mestre, Juli\'{a}n and Wirth, Anthony},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2024.20},
  URN =		{urn:nbn:de:0030-drops-221476},
  doi =		{10.4230/LIPIcs.ISAAC.2024.20},
  annote =	{Keywords: Approximation Algorithm, Scheduling, Calibration, Resource Augmentation}
}
Document
Position
DOI: 10.4230/TGDK.2.1.2
Grounding Stream Reasoning Research

Authors: Pieter Bonte, Jean-Paul Calbimonte, Daniel de Leng, Daniele Dell'Aglio, Emanuele Della Valle, Thomas Eiter, Federico Giannini, Fredrik Heintz, Konstantin Schekotihin, Danh Le-Phuoc, Alessandra Mileo, Patrik Schneider, Riccardo Tommasini, Jacopo Urbani, and Giacomo Ziffer

Published in: TGDK, Volume 2, Issue 1 (2024): Special Issue on Trends in Graph Data and Knowledge - Part 2. Transactions on Graph Data and Knowledge, Volume 2, Issue 1

Abstract
In the last decade, there has been a growing interest in applying AI technologies to implement complex data analytics over data streams. To this end, researchers in various fields have been organising a yearly event called the "Stream Reasoning Workshop" to share perspectives, challenges, and experiences around this topic. In this paper, the previous organisers of the workshops and other community members provide a summary of the main research results that have been discussed during the first six editions of the event. These results can be categorised into four main research areas: The first is concerned with the technological challenges related to handling large data streams. The second area aims at adapting and extending existing semantic technologies to data streams. The third and fourth areas focus on how to implement reasoning techniques, either considering deductive or inductive techniques, to extract new and valuable knowledge from the data in the stream. This summary is written not only to provide a crystallisation of the field, but also to point out distinctive traits of the stream reasoning community. Moreover, it also provides a foundation for future research by enumerating a list of use cases and open challenges, to stimulate others to join this exciting research area.
Cite as

Pieter Bonte, Jean-Paul Calbimonte, Daniel de Leng, Daniele Dell'Aglio, Emanuele Della Valle, Thomas Eiter, Federico Giannini, Fredrik Heintz, Konstantin Schekotihin, Danh Le-Phuoc, Alessandra Mileo, Patrik Schneider, Riccardo Tommasini, Jacopo Urbani, and Giacomo Ziffer. Grounding Stream Reasoning Research. In Special Issue on Trends in Graph Data and Knowledge - Part 2. Transactions on Graph Data and Knowledge (TGDK), Volume 2, Issue 1, pp. 2:1-2:47, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@Article{bonte_et_al:TGDK.2.1.2,
  author =	{Bonte, Pieter and Calbimonte, Jean-Paul and de Leng, Daniel and Dell'Aglio, Daniele and Della Valle, Emanuele and Eiter, Thomas and Giannini, Federico and Heintz, Fredrik and Schekotihin, Konstantin and Le-Phuoc, Danh and Mileo, Alessandra and Schneider, Patrik and Tommasini, Riccardo and Urbani, Jacopo and Ziffer, Giacomo},
  title =	{{Grounding Stream Reasoning Research}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{2:1--2:47},
  ISSN =	{2942-7517},
  year =	{2024},
  volume =	{2},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.2.1.2},
  URN =		{urn:nbn:de:0030-drops-198597},
  doi =		{10.4230/TGDK.2.1.2},
  annote =	{Keywords: Stream Reasoning, Stream Processing, RDF streams, Streaming Linked Data, Continuous query processing, Temporal Logics, High-performance computing, Databases}
}
Document
Survey
DOI: 10.4230/TGDK.2.1.3
Semantic Web: Past, Present, and Future

Authors: Ansgar Scherp, Gerd Groener, Petr Škoda, Katja Hose, and Maria-Esther Vidal

Published in: TGDK, Volume 2, Issue 1 (2024): Special Issue on Trends in Graph Data and Knowledge - Part 2. Transactions on Graph Data and Knowledge, Volume 2, Issue 1

Abstract
Ever since the vision was formulated, the Semantic Web has inspired many generations of innovations. Semantic technologies have been used to share vast amounts of information on the Web, enhance them with semantics to give them meaning, and enable inference and reasoning on them. Throughout the years, semantic technologies, and in particular knowledge graphs, have been used in search engines, data integration, enterprise settings, and machine learning. In this paper, we recap the classical concepts and foundations of the Semantic Web as well as modern and recent concepts and applications, building upon these foundations. The classical topics we cover include knowledge representation, creating and validating knowledge on the Web, reasoning and linking, and distributed querying. We enhance this classical view of the so-called "Semantic Web Layer Cake" with an update of recent concepts that include provenance, security and trust, as well as a discussion of practical impacts from industry-led contributions. We conclude with an outlook on the future directions of the Semantic Web. This is a living document. If you like to contribute, please contact the first author and visit: https://github.com/ascherp/semantic-web-primer
Cite as

Ansgar Scherp, Gerd Groener, Petr Škoda, Katja Hose, and Maria-Esther Vidal. Semantic Web: Past, Present, and Future. In Special Issue on Trends in Graph Data and Knowledge - Part 2. Transactions on Graph Data and Knowledge (TGDK), Volume 2, Issue 1, pp. 3:1-3:37, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

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@Article{scherp_et_al:TGDK.2.1.3,
  author =	{Scherp, Ansgar and Groener, Gerd and \v{S}koda, Petr and Hose, Katja and Vidal, Maria-Esther},
  title =	{{Semantic Web: Past, Present, and Future}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{3:1--3:37},
  ISSN =	{2942-7517},
  year =	{2024},
  volume =	{2},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.2.1.3},
  URN =		{urn:nbn:de:0030-drops-198607},
  doi =		{10.4230/TGDK.2.1.3},
  annote =	{Keywords: Linked Open Data, Semantic Web Graphs, Knowledge Graphs}
}
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