Published in: LIPIcs, Volume 248, 33rd International Symposium on Algorithms and Computation (ISAAC 2022)
Szilárd Zsolt Fazekas, Hwee Kim, Ryuichi Matsuoka, Shinnosuke Seki, and Hinano Takeuchi. On Algorithmic Self-Assembly of Squares by Co-Transcriptional Folding. In 33rd International Symposium on Algorithms and Computation (ISAAC 2022). Leibniz International Proceedings in Informatics (LIPIcs), Volume 248, pp. 37:1-37:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2022)
@InProceedings{fazekas_et_al:LIPIcs.ISAAC.2022.37, author = {Fazekas, Szil\'{a}rd Zsolt and Kim, Hwee and Matsuoka, Ryuichi and Seki, Shinnosuke and Takeuchi, Hinano}, title = {{On Algorithmic Self-Assembly of Squares by Co-Transcriptional Folding}}, booktitle = {33rd International Symposium on Algorithms and Computation (ISAAC 2022)}, pages = {37:1--37:15}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-258-7}, ISSN = {1868-8969}, year = {2022}, volume = {248}, editor = {Bae, Sang Won and Park, Heejin}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2022.37}, URN = {urn:nbn:de:0030-drops-173228}, doi = {10.4230/LIPIcs.ISAAC.2022.37}, annote = {Keywords: Algorithmic molecular self-assembly, Co-transcriptional folding, Oritatami system, Self-assembly of squares} }
Published in: LIPIcs, Volume 219, 39th International Symposium on Theoretical Aspects of Computer Science (STACS 2022)
Daria Pchelina, Nicolas Schabanel, Shinnosuke Seki, and Guillaume Theyssier. Oritatami Systems Assemble Shapes No Less Complex Than Tile Assembly Model (ATAM). In 39th International Symposium on Theoretical Aspects of Computer Science (STACS 2022). Leibniz International Proceedings in Informatics (LIPIcs), Volume 219, pp. 51:1-51:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2022)
@InProceedings{pchelina_et_al:LIPIcs.STACS.2022.51, author = {Pchelina, Daria and Schabanel, Nicolas and Seki, Shinnosuke and Theyssier, Guillaume}, title = {{Oritatami Systems Assemble Shapes No Less Complex Than Tile Assembly Model (ATAM)}}, booktitle = {39th International Symposium on Theoretical Aspects of Computer Science (STACS 2022)}, pages = {51:1--51:23}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-222-8}, ISSN = {1868-8969}, year = {2022}, volume = {219}, editor = {Berenbrink, Petra and Monmege, Benjamin}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2022.51}, URN = {urn:nbn:de:0030-drops-158618}, doi = {10.4230/LIPIcs.STACS.2022.51}, annote = {Keywords: Molecular Self-assembly, Co-transcriptional folding, Intrinsic simulation, Arithmetical hierarchy of real numbers, 2D Turing machines, Computability} }
Published in: LIPIcs, Volume 123, 29th International Symposium on Algorithms and Computation (ISAAC 2018)
Cody Geary, Pierre-Étienne Meunier, Nicolas Schabanel, and Shinnosuke Seki. Proving the Turing Universality of Oritatami Co-Transcriptional Folding. In 29th International Symposium on Algorithms and Computation (ISAAC 2018). Leibniz International Proceedings in Informatics (LIPIcs), Volume 123, pp. 23:1-23:13, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2018)
@InProceedings{geary_et_al:LIPIcs.ISAAC.2018.23, author = {Geary, Cody and Meunier, Pierre-\'{E}tienne and Schabanel, Nicolas and Seki, Shinnosuke}, title = {{Proving the Turing Universality of Oritatami Co-Transcriptional Folding}}, booktitle = {29th International Symposium on Algorithms and Computation (ISAAC 2018)}, pages = {23:1--23:13}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-094-1}, ISSN = {1868-8969}, year = {2018}, volume = {123}, editor = {Hsu, Wen-Lian and Lee, Der-Tsai and Liao, Chung-Shou}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2018.23}, URN = {urn:nbn:de:0030-drops-99715}, doi = {10.4230/LIPIcs.ISAAC.2018.23}, annote = {Keywords: Molecular computing, Turing universality, co-transcriptional folding} }
Published in: LIPIcs, Volume 58, 41st International Symposium on Mathematical Foundations of Computer Science (MFCS 2016)
Cody Geary, Pierre-Etienne Meunier, Nicolas Schabanel, and Shinnosuke Seki. Programming Biomolecules That Fold Greedily During Transcription. In 41st International Symposium on Mathematical Foundations of Computer Science (MFCS 2016). Leibniz International Proceedings in Informatics (LIPIcs), Volume 58, pp. 43:1-43:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2016)
@InProceedings{geary_et_al:LIPIcs.MFCS.2016.43, author = {Geary, Cody and Meunier, Pierre-Etienne and Schabanel, Nicolas and Seki, Shinnosuke}, title = {{Programming Biomolecules That Fold Greedily During Transcription}}, booktitle = {41st International Symposium on Mathematical Foundations of Computer Science (MFCS 2016)}, pages = {43:1--43:14}, series = {Leibniz International Proceedings in Informatics (LIPIcs)}, ISBN = {978-3-95977-016-3}, ISSN = {1868-8969}, year = {2016}, volume = {58}, editor = {Faliszewski, Piotr and Muscholl, Anca and Niedermeier, Rolf}, publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik}, address = {Dagstuhl, Germany}, URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.MFCS.2016.43}, URN = {urn:nbn:de:0030-drops-64567}, doi = {10.4230/LIPIcs.MFCS.2016.43}, annote = {Keywords: natural computing, self-assembly, molecular folding} }