Published in: LIPIcs, Volume 347, 31st International Conference on DNA Computing and Molecular Programming (DNA 31) (2025)
Florent Becker, Phillip Drake, Matthew J. Patitz, and Trent A. Rogers. Synchronous Versus Asynchronous Tile-Based Self-Assembly. In 31st International Conference on DNA Computing and Molecular Programming (DNA 31). Leibniz International Proceedings in Informatics (LIPIcs), Volume 347, pp. 9:1-9:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)
@InProceedings{becker_et_al:LIPIcs.DNA.31.9,
author = {Becker, Florent and Drake, Phillip and Patitz, Matthew J. and Rogers, Trent A.},
title = {{Synchronous Versus Asynchronous Tile-Based Self-Assembly}},
booktitle = {31st International Conference on DNA Computing and Molecular Programming (DNA 31)},
pages = {9:1--9:21},
series = {Leibniz International Proceedings in Informatics (LIPIcs)},
ISBN = {978-3-95977-399-7},
ISSN = {1868-8969},
year = {2025},
volume = {347},
editor = {Schaeffer, Josie and Zhang, Fei},
publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
address = {Dagstuhl, Germany},
URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.DNA.31.9},
URN = {urn:nbn:de:0030-drops-238580},
doi = {10.4230/LIPIcs.DNA.31.9},
annote = {Keywords: self-assembly, noncooperative self-assembly, models of computation, tile assembly systems}
}
Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)
Djamel Eddine Amir and Benjamin Hellouin de Menibus. Minimality and Computability of Languages of G-Shifts. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 139:1-139:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)
@InProceedings{amir_et_al:LIPIcs.ICALP.2025.139,
author = {Amir, Djamel Eddine and Hellouin de Menibus, Benjamin},
title = {{Minimality and Computability of Languages of G-Shifts}},
booktitle = {52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
pages = {139:1--139:19},
series = {Leibniz International Proceedings in Informatics (LIPIcs)},
ISBN = {978-3-95977-372-0},
ISSN = {1868-8969},
year = {2025},
volume = {334},
editor = {Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
address = {Dagstuhl, Germany},
URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.139},
URN = {urn:nbn:de:0030-drops-235161},
doi = {10.4230/LIPIcs.ICALP.2025.139},
annote = {Keywords: shifts, subshifts, minimal shifts, computable language, computability, strong computable type, descriptive complexity}
}
Published in: LIPIcs, Volume 330, 4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025)
Tim Gomez, Elise Grizzell, Asher Haun, Ryan Knobel, Tom Peters, Robert Schweller, and Tim Wylie. Brief Announcement: Intrinsic Universality in Seeded Active Tile Self-Assembly. In 4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 330, pp. 24:1-24:6, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)
@InProceedings{gomez_et_al:LIPIcs.SAND.2025.24,
author = {Gomez, Tim and Grizzell, Elise and Haun, Asher and Knobel, Ryan and Peters, Tom and Schweller, Robert and Wylie, Tim},
title = {{Brief Announcement: Intrinsic Universality in Seeded Active Tile Self-Assembly}},
booktitle = {4th Symposium on Algorithmic Foundations of Dynamic Networks (SAND 2025)},
pages = {24:1--24:6},
series = {Leibniz International Proceedings in Informatics (LIPIcs)},
ISBN = {978-3-95977-368-3},
ISSN = {1868-8969},
year = {2025},
volume = {330},
editor = {Meeks, Kitty and Scheideler, Christian},
publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
address = {Dagstuhl, Germany},
URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SAND.2025.24},
URN = {urn:nbn:de:0030-drops-230772},
doi = {10.4230/LIPIcs.SAND.2025.24},
annote = {Keywords: Intrinsic Universality, Tile Automata, Cellular Automata, Self-assembly}
}
Published in: LIPIcs, Volume 327, 42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025)
Benjamin Hellouin de Menibus and Pacôme Perrotin. Subshifts Defined by Nondeterministic and Alternating Plane-Walking Automata. In 42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 327, pp. 48:1-48:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)
@InProceedings{hellouindemenibus_et_al:LIPIcs.STACS.2025.48,
author = {Hellouin de Menibus, Benjamin and Perrotin, Pac\^{o}me},
title = {{Subshifts Defined by Nondeterministic and Alternating Plane-Walking Automata}},
booktitle = {42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025)},
pages = {48:1--48:15},
series = {Leibniz International Proceedings in Informatics (LIPIcs)},
ISBN = {978-3-95977-365-2},
ISSN = {1868-8969},
year = {2025},
volume = {327},
editor = {Beyersdorff, Olaf and Pilipczuk, Micha{\l} and Pimentel, Elaine and Thắng, Nguy\~{ê}n Kim},
publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
address = {Dagstuhl, Germany},
URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2025.48},
URN = {urn:nbn:de:0030-drops-228540},
doi = {10.4230/LIPIcs.STACS.2025.48},
annote = {Keywords: Formal languages, Finite automata, Subshifts, Symbolic dynamics, Tilings}
}
Published in: LIPIcs, Volume 297, 51st International Colloquium on Automata, Languages, and Programming (ICALP 2024)
Guillaume Theyssier. FO Logic on Cellular Automata Orbits Equals MSO Logic. In 51st International Colloquium on Automata, Languages, and Programming (ICALP 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 297, pp. 154:1-154:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)
@InProceedings{theyssier:LIPIcs.ICALP.2024.154,
author = {Theyssier, Guillaume},
title = {{FO Logic on Cellular Automata Orbits Equals MSO Logic}},
booktitle = {51st International Colloquium on Automata, Languages, and Programming (ICALP 2024)},
pages = {154:1--154:20},
series = {Leibniz International Proceedings in Informatics (LIPIcs)},
ISBN = {978-3-95977-322-5},
ISSN = {1868-8969},
year = {2024},
volume = {297},
editor = {Bringmann, Karl and Grohe, Martin and Puppis, Gabriele and Svensson, Ola},
publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
address = {Dagstuhl, Germany},
URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2024.154},
URN = {urn:nbn:de:0030-drops-202972},
doi = {10.4230/LIPIcs.ICALP.2024.154},
annote = {Keywords: MSO logic, FO logic, cellular automata, domino problem, Cayley graphs}
}
Published in: LIPIcs, Volume 238, 28th International Conference on DNA Computing and Molecular Programming (DNA 28) (2022)
Samuel Nalin and Guillaume Theyssier. On Turedo Hierarchies and Intrinsic Universality. In 28th International Conference on DNA Computing and Molecular Programming (DNA 28). Leibniz International Proceedings in Informatics (LIPIcs), Volume 238, pp. 6:1-6:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2022)
@InProceedings{nalin_et_al:LIPIcs.DNA.28.6,
author = {Nalin, Samuel and Theyssier, Guillaume},
title = {{On Turedo Hierarchies and Intrinsic Universality}},
booktitle = {28th International Conference on DNA Computing and Molecular Programming (DNA 28)},
pages = {6:1--6:18},
series = {Leibniz International Proceedings in Informatics (LIPIcs)},
ISBN = {978-3-95977-253-2},
ISSN = {1868-8969},
year = {2022},
volume = {238},
editor = {Ouldridge, Thomas E. and Wickham, Shelley F. J.},
publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
address = {Dagstuhl, Germany},
URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.DNA.28.6},
URN = {urn:nbn:de:0030-drops-167915},
doi = {10.4230/LIPIcs.DNA.28.6},
annote = {Keywords: Turedos, intrinsic universality, Higher-dimensional Turing machines, Oritatami systems}
}
Published in: LIPIcs, Volume 219, 39th International Symposium on Theoretical Aspects of Computer Science (STACS 2022)
Daria Pchelina, Nicolas Schabanel, Shinnosuke Seki, and Guillaume Theyssier. Oritatami Systems Assemble Shapes No Less Complex Than Tile Assembly Model (ATAM). In 39th International Symposium on Theoretical Aspects of Computer Science (STACS 2022). Leibniz International Proceedings in Informatics (LIPIcs), Volume 219, pp. 51:1-51:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2022)
@InProceedings{pchelina_et_al:LIPIcs.STACS.2022.51,
author = {Pchelina, Daria and Schabanel, Nicolas and Seki, Shinnosuke and Theyssier, Guillaume},
title = {{Oritatami Systems Assemble Shapes No Less Complex Than Tile Assembly Model (ATAM)}},
booktitle = {39th International Symposium on Theoretical Aspects of Computer Science (STACS 2022)},
pages = {51:1--51:23},
series = {Leibniz International Proceedings in Informatics (LIPIcs)},
ISBN = {978-3-95977-222-8},
ISSN = {1868-8969},
year = {2022},
volume = {219},
editor = {Berenbrink, Petra and Monmege, Benjamin},
publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
address = {Dagstuhl, Germany},
URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2022.51},
URN = {urn:nbn:de:0030-drops-158618},
doi = {10.4230/LIPIcs.STACS.2022.51},
annote = {Keywords: Molecular Self-assembly, Co-transcriptional folding, Intrinsic simulation, Arithmetical hierarchy of real numbers, 2D Turing machines, Computability}
}
Published in: LIPIcs, Volume 202, 46th International Symposium on Mathematical Foundations of Computer Science (MFCS 2021)
Pablo Arrighi, Marin Costes, and Nathanaël Eon. Universal Gauge-Invariant Cellular Automata. In 46th International Symposium on Mathematical Foundations of Computer Science (MFCS 2021). Leibniz International Proceedings in Informatics (LIPIcs), Volume 202, pp. 9:1-9:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2021)
@InProceedings{arrighi_et_al:LIPIcs.MFCS.2021.9,
author = {Arrighi, Pablo and Costes, Marin and Eon, Nathana\"{e}l},
title = {{Universal Gauge-Invariant Cellular Automata}},
booktitle = {46th International Symposium on Mathematical Foundations of Computer Science (MFCS 2021)},
pages = {9:1--9:14},
series = {Leibniz International Proceedings in Informatics (LIPIcs)},
ISBN = {978-3-95977-201-3},
ISSN = {1868-8969},
year = {2021},
volume = {202},
editor = {Bonchi, Filippo and Puglisi, Simon J.},
publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
address = {Dagstuhl, Germany},
URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.MFCS.2021.9},
URN = {urn:nbn:de:0030-drops-144490},
doi = {10.4230/LIPIcs.MFCS.2021.9},
annote = {Keywords: Cellular automata, Gauge-invariance, Universality}
}
Published in: LIPIcs, Volume 187, 38th International Symposium on Theoretical Aspects of Computer Science (STACS 2021)
Guilhem Gamard, Pierre Guillon, Kevin Perrot, and Guillaume Theyssier. Rice-Like Theorems for Automata Networks. In 38th International Symposium on Theoretical Aspects of Computer Science (STACS 2021). Leibniz International Proceedings in Informatics (LIPIcs), Volume 187, pp. 32:1-32:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2021)
@InProceedings{gamard_et_al:LIPIcs.STACS.2021.32,
author = {Gamard, Guilhem and Guillon, Pierre and Perrot, Kevin and Theyssier, Guillaume},
title = {{Rice-Like Theorems for Automata Networks}},
booktitle = {38th International Symposium on Theoretical Aspects of Computer Science (STACS 2021)},
pages = {32:1--32:17},
series = {Leibniz International Proceedings in Informatics (LIPIcs)},
ISBN = {978-3-95977-180-1},
ISSN = {1868-8969},
year = {2021},
volume = {187},
editor = {Bl\"{a}ser, Markus and Monmege, Benjamin},
publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
address = {Dagstuhl, Germany},
URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2021.32},
URN = {urn:nbn:de:0030-drops-136770},
doi = {10.4230/LIPIcs.STACS.2021.32},
annote = {Keywords: Automata networks, Rice theorem, complexity classes, polynomial hierarchy, hardness}
}
Published in: LIPIcs, Volume 3, 26th International Symposium on Theoretical Aspects of Computer Science (2009)
Laurent Boyer and Guillaume Theyssier. On Local Symmetries and Universality in Cellular Automata. In 26th International Symposium on Theoretical Aspects of Computer Science. Leibniz International Proceedings in Informatics (LIPIcs), Volume 3, pp. 195-206, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2009)
@InProceedings{boyer_et_al:LIPIcs.STACS.2009.1836,
author = {Boyer, Laurent and Theyssier, Guillaume},
title = {{On Local Symmetries and Universality in Cellular Automata}},
booktitle = {26th International Symposium on Theoretical Aspects of Computer Science},
pages = {195--206},
series = {Leibniz International Proceedings in Informatics (LIPIcs)},
ISBN = {978-3-939897-09-5},
ISSN = {1868-8969},
year = {2009},
volume = {3},
editor = {Albers, Susanne and Marion, Jean-Yves},
publisher = {Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
address = {Dagstuhl, Germany},
URL = {https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2009.1836},
URN = {urn:nbn:de:0030-drops-18369},
doi = {10.4230/LIPIcs.STACS.2009.1836},
annote = {Keywords: Cellular automata, Universality, Asymptotic density}
}