9 Search Results for "Ferreira, Diogo"


Document
Hardness Results on Characteristics for Elastic-Degenerate Strings

Authors: Dominik Köppl and Jannik Olbrich

Published in: LIPIcs, Volume 369, 37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026)


Abstract
Generalizations of plain strings have been proposed as a compact way to represent a collection of nearly identical sequences or to express uncertainty at specific text positions by enumerating all possibilities. While a plain string stores a character at each of its positions, generalizations consider a set of characters (indeterminate strings), a set of strings of equal length (generalized degenerate strings, or shortly GD strings), or a set of strings of arbitrary lengths (elastic-degenerate strings, or shortly ED strings). These generalizations are of importance to compactly represent such type of data, and find applications in bioinformatics for representing and maintaining a set of genetic sequences of the same taxonomy or a multiple sequence alignment. To be of use, attention has been drawn to answering various query types such as pattern matching or measuring similarity of ED strings by generalizing techniques known to plain strings. However, for some types of queries, it has been shown that a generalization of a polynomial-time solvable query on classic strings becomes NP-hard on ED strings, e.g. [Russo et al., 2022]. In that light, we wonder about other types of queries that are of particular interest to bioinformatics: unique substrings, absent words, anti-powers, longest previous factors, and Lempel-Ziv-like compression schemes. While we obtain a polynomial time algorithm for a variation of longest previous factors, we show that all other problems are NP-hard to compute, some of them even under the restriction that the input can be modeled as an indeterminate or GD string.

Cite as

Dominik Köppl and Jannik Olbrich. Hardness Results on Characteristics for Elastic-Degenerate Strings. In 37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 369, pp. 14:1-14:25, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{koppl_et_al:LIPIcs.CPM.2026.14,
  author =	{K\"{o}ppl, Dominik and Olbrich, Jannik},
  title =	{{Hardness Results on Characteristics for Elastic-Degenerate Strings}},
  booktitle =	{37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026)},
  pages =	{14:1--14:25},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-420-8},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{369},
  editor =	{Bille, Philip and Prezza, Nicola},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2026.14},
  URN =		{urn:nbn:de:0030-drops-259409},
  doi =		{10.4230/LIPIcs.CPM.2026.14},
  annote =	{Keywords: Elastic-degenerate strings, NP-hardness, longest common factor, minimal unique substring, minimal absent word, anti-power, longest previous factor}
}
Document
Faster Algorithms for Shortest Unique or Absent Substrings

Authors: Panagiotis Charalampopoulos, Manal Mohamed, Solon P. Pissis, Hilde Verbeek, and Wiktor Zuba

Published in: LIPIcs, Volume 370, 20th Scandinavian Symposium on Algorithm Theory (SWAT 2026)


Abstract
We revisit two well-known algorithmic problems on strings: computing a shortest unique substring (SUS) and a shortest absent substring (SAS) in a string S of length n. Both problems admit folklore 𝒪(n)-time solutions using the suffix tree of S. However, for small alphabets, this complexity is not necessarily optimal in the word RAM model, where a string of length n over alphabet [0,σ) can be stored in 𝒪(n log σ/log n) space and read in 𝒪(n log σ/log n) time. We present an 𝒪(n log σ/√{log n})-time algorithm for computing a SUS in S. This algorithm decomposes the problem according to the length and the period of the sought substring and uses several tools and techniques, such as synchronizing sets, the analysis of runs, and wavelet trees, to reduce the computation of a SUS to a simple geometric problem. Further, we adapt this algorithm and combine it with an efficient construction of de Bruijn sequences in order to obtain an 𝒪(n log σ/√{log n})-time algorithm for computing a SAS in S.

Cite as

Panagiotis Charalampopoulos, Manal Mohamed, Solon P. Pissis, Hilde Verbeek, and Wiktor Zuba. Faster Algorithms for Shortest Unique or Absent Substrings. In 20th Scandinavian Symposium on Algorithm Theory (SWAT 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 370, pp. 13:1-13:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{charalampopoulos_et_al:LIPIcs.SWAT.2026.13,
  author =	{Charalampopoulos, Panagiotis and Mohamed, Manal and Pissis, Solon P. and Verbeek, Hilde and Zuba, Wiktor},
  title =	{{Faster Algorithms for Shortest Unique or Absent Substrings}},
  booktitle =	{20th Scandinavian Symposium on Algorithm Theory (SWAT 2026)},
  pages =	{13:1--13:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-421-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{370},
  editor =	{Fraigniaud, Pierre},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SWAT.2026.13},
  URN =		{urn:nbn:de:0030-drops-260493},
  doi =		{10.4230/LIPIcs.SWAT.2026.13},
  annote =	{Keywords: string algorithms, unique substrings, absent substrings, absent words}
}
Document
Discovering and Repairing Flaws in C Binaries Without Requiring Codebase and Instrumentation

Authors: Diogo Ferreira and Ibéria Medeiros

Published in: OASIcs, Volume 143, 30th Ada-Europe International Conference on Reliable Software Technologies (AEiC 2026)


Abstract
Industrial and embedded software systems frequently integrate various third-party components sourced from diverse providers into their codebases. These systems are commonly developed in C, a language known for its lack of variable bounds checking, making it vulnerable to Buffer Overflows (BOs), which, when exploited, can cause severe damage. Consequently, the binary code resulting from vulnerable C programs is also vulnerable and remains so in the final products. Fixing these software systems is challenging because only binary code is available. This paper presents PatchBin, a binary patching tool to automatically fix BO vulnerabilities and validate the effectiveness of fixes while ensuring no new flaws are introduced. The approach involves a combination of fuzzing, reverse static analysis and static rewriting techniques to, respectively, (i) identify possible malicious inputs that can trigger BOs, (ii) find their root cause by employing reverse data flow analysis, and (iii) remove them by rewriting the binary code with effective validation, thus generating a new binary without the original flaws and new ones. Experimental evaluations with synthetic and real-world applications demonstrated that PatchBin detects and fixes BO in binary programs without introducing new vulnerabilities. The results showed that PatchBin is an important aid for industrial partners, enabling them to test and fix their products, including third-party components, without access to source code, but only to binary code.

Cite as

Diogo Ferreira and Ibéria Medeiros. Discovering and Repairing Flaws in C Binaries Without Requiring Codebase and Instrumentation. In 30th Ada-Europe International Conference on Reliable Software Technologies (AEiC 2026). Open Access Series in Informatics (OASIcs), Volume 143, pp. 2:1-2:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{ferreira_et_al:OASIcs.AEiC.2026.2,
  author =	{Ferreira, Diogo and Medeiros, Ib\'{e}ria},
  title =	{{Discovering and Repairing Flaws in C Binaries Without Requiring Codebase and Instrumentation}},
  booktitle =	{30th Ada-Europe International Conference on Reliable Software Technologies (AEiC 2026)},
  pages =	{2:1--2:19},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-425-3},
  ISSN =	{2190-6807},
  year =	{2026},
  volume =	{143},
  editor =	{Filieri, Antonio and Backeman, Peter},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.AEiC.2026.2},
  URN =		{urn:nbn:de:0030-drops-259209},
  doi =		{10.4230/OASIcs.AEiC.2026.2},
  annote =	{Keywords: Buffer Overflow Vulnerabilities, Binary Patching, Reverse Engineering, Static Analysis, Software Security}
}
Document
Byzantine Consensus in the Random Asynchronous Model

Authors: George Danezis, Jovan Komatovic, Lefteris Kokoris-Kogias, Alberto Sonnino, and Igor Zablotchi

Published in: LIPIcs, Volume 356, 39th International Symposium on Distributed Computing (DISC 2025)


Abstract
We propose a novel relaxation of the classic asynchronous network model, called the random asynchronous model, which removes adversarial message scheduling while preserving unbounded message delays and Byzantine faults. Instead of an adversary dictating message order, delivery follows a random schedule. We analyze Byzantine consensus at different resilience thresholds (n = 3f+1, n = 2f+1, and n = f+2) and show that our relaxation allows consensus with probabilistic guarantees which are impossible in the standard asynchronous model or even the partially synchronous model. We complement these protocols with corresponding impossibility results, establishing the limits of consensus in the random asynchronous model.

Cite as

George Danezis, Jovan Komatovic, Lefteris Kokoris-Kogias, Alberto Sonnino, and Igor Zablotchi. Byzantine Consensus in the Random Asynchronous Model. In 39th International Symposium on Distributed Computing (DISC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 356, pp. 28:1-28:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{danezis_et_al:LIPIcs.DISC.2025.28,
  author =	{Danezis, George and Komatovic, Jovan and Kokoris-Kogias, Lefteris and Sonnino, Alberto and Zablotchi, Igor},
  title =	{{Byzantine Consensus in the Random Asynchronous Model}},
  booktitle =	{39th International Symposium on Distributed Computing (DISC 2025)},
  pages =	{28:1--28:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-402-4},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{356},
  editor =	{Kowalski, Dariusz R.},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.DISC.2025.28},
  URN =		{urn:nbn:de:0030-drops-248457},
  doi =		{10.4230/LIPIcs.DISC.2025.28},
  annote =	{Keywords: network model, asynchronous, random scheduler, Byzantine consensus}
}
Document
A Generative Artificial Intelligence Tool to Correct Programming Exercises

Authors: Filipe Portela

Published in: OASIcs, Volume 133, 6th International Computer Programming Education Conference (ICPEC 2025)


Abstract
This paper presents an innovative strategy for assessing programming exercises in higher education, leveraging generative artificial intelligence (GAI) to support automated grading while ensuring transparency, fairness, and pedagogical relevance. The proposed approach is framed within the TechTeach paradigm and integrates multiple tools - HackerRank for code development, Google Forms and Sheets for submission and prompt generation, and the ChatGPT API for intelligent evaluation. The correction process is personalised using student-specific variables (e.g., student ID, birth date, performance in group work), which are dynamically embedded into the statement and prompt. The GAI algorithm evaluates the code and performs authorship verification using peer-assessed effort data, enabling the detection of potential plagiarism or misuse of AI tools. A case study was conducted in the 2023/2024 edition of the Web Programming course at the University of Minho, which involved 118 students. Results indicate that the method produced consistent and meaningful grades, reflecting a balanced perception of difficulty from students. The system also includes a gamification mechanism (Grade Rescue) for managing contested cases. The achieved findings (>90% of students approved the exercise model) support the viability of GAI-based evaluation as a scalable and effective solution for programming education, while maintaining academic integrity and enhancing the student experience.

Cite as

Filipe Portela. A Generative Artificial Intelligence Tool to Correct Programming Exercises. In 6th International Computer Programming Education Conference (ICPEC 2025). Open Access Series in Informatics (OASIcs), Volume 133, pp. 7:1-7:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{portela:OASIcs.ICPEC.2025.7,
  author =	{Portela, Filipe},
  title =	{{A Generative Artificial Intelligence Tool to Correct Programming Exercises}},
  booktitle =	{6th International Computer Programming Education Conference (ICPEC 2025)},
  pages =	{7:1--7:16},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-393-5},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{133},
  editor =	{Queir\'{o}s, Ricardo and Pinto, M\'{a}rio and Portela, Filipe and Sim\~{o}es, Alberto},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.ICPEC.2025.7},
  URN =		{urn:nbn:de:0030-drops-240376},
  doi =		{10.4230/OASIcs.ICPEC.2025.7},
  annote =	{Keywords: TechTeach, Information Systems, Higher Education, Generative AI, Code Exercises}
}
Document
Research
Specific Patterns Against Reference Sequences

Authors: Marie-Pierre Béal and Maxime Crochemore

Published in: OASIcs, Volume 132, From Strings to Graphs, and Back Again: A Festschrift for Roberto Grossi's 60th Birthday (2025)


Abstract
We design alignment-free techniques for comparing a set of sequences or just a word, called a target, against another set of words, called a reference. This is done with the detection of factor patterns that distinguish the target from the reference. A target-specific factor of a target T against a reference R is then a factor w of a word in T that is not a factor of a word in R but whose proper factors of w are factors of a word in R. The strategy is based on the notion of minimal absent/forbidden words. We first address the computation of the set of target-specific factors of a target T against a reference R, where T and R are finite sets of sequences. The result is the construction of an automaton accepting the set of all considered target-specific factors. The construction algorithm runs in linear time according to the size of T ∪ R. The second result is the design of an algorithm to compute all the occurrences in a single sequence T of its target-specific factors against a reference R. The algorithm runs in real-time on the target sequence, independently of the number of occurrences of target-specific factors.

Cite as

Marie-Pierre Béal and Maxime Crochemore. Specific Patterns Against Reference Sequences. In From Strings to Graphs, and Back Again: A Festschrift for Roberto Grossi's 60th Birthday. Open Access Series in Informatics (OASIcs), Volume 132, pp. 14:1-14:12, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{beal_et_al:OASIcs.Grossi.14,
  author =	{B\'{e}al, Marie-Pierre and Crochemore, Maxime},
  title =	{{Specific Patterns Against Reference Sequences}},
  booktitle =	{From Strings to Graphs, and Back Again: A Festschrift for Roberto Grossi's 60th Birthday},
  pages =	{14:1--14:12},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-391-1},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{132},
  editor =	{Conte, Alessio and Marino, Andrea and Rosone, Giovanna and Vitter, Jeffrey Scott},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.Grossi.14},
  URN =		{urn:nbn:de:0030-drops-238130},
  doi =		{10.4230/OASIcs.Grossi.14},
  annote =	{Keywords: Specific pattern, Minimal absent word, Minimal forbidden word, Directed Acyclic Word Graph (DAWG), Suffix automaton}
}
Document
Ensuring Convergence and Invariants Without Coordination

Authors: Dina Borrego, Nuno Preguiça, Elisa Gonzalez Boix, and Carla Ferreira

Published in: LIPIcs, Volume 333, 39th European Conference on Object-Oriented Programming (ECOOP 2025)


Abstract
The CAP theorem demonstrates a trade-off between consistency and availability (and, by extension, latency) in systems where network partitions are unavoidable, such as in cloud computing and local-first software. While adopting weak consistency can preserve availability, it may result in inconsistencies that compromise application correctness. Replicated data types provide a principled, coordination-free approach to guarantee convergence but do not consider application invariants. Existing methods for maintaining invariants in replicated systems either rely on coordination - undermining the benefits of weak consistency - or suffer from limited applicability. This paper introduces the No-Op framework, a generic approach for enforcing consistency without coordination while guaranteeing both convergence and invariant preservation. The core idea of the No-Op approach is to resolve conflicts among concurrent operations by prioritising one operation over the other according to programmer-defined conflict resolution policies. This prioritisation transforms the less-preferred operation into a no-side-effect operation, ensuring conflict-free execution. We formalise the model underlying the No-Op framework and introduce a replication protocol built upon it, accompanied by a formal proof of correctness for both the framework and the protocol. Furthermore, we demonstrate the framework’s applicability by showcasing the design of widely used replicated data types and the preservation of a wide range of application invariants.

Cite as

Dina Borrego, Nuno Preguiça, Elisa Gonzalez Boix, and Carla Ferreira. Ensuring Convergence and Invariants Without Coordination. In 39th European Conference on Object-Oriented Programming (ECOOP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 333, pp. 4:1-4:29, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{borrego_et_al:LIPIcs.ECOOP.2025.4,
  author =	{Borrego, Dina and Pregui\c{c}a, Nuno and Gonzalez Boix, Elisa and Ferreira, Carla},
  title =	{{Ensuring Convergence and Invariants Without Coordination}},
  booktitle =	{39th European Conference on Object-Oriented Programming (ECOOP 2025)},
  pages =	{4:1--4:29},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-373-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{333},
  editor =	{Aldrich, Jonathan and Silva, Alexandra},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ECOOP.2025.4},
  URN =		{urn:nbn:de:0030-drops-232978},
  doi =		{10.4230/LIPIcs.ECOOP.2025.4},
  annote =	{Keywords: distributed systems, conflict resolution, RDTs, invariant preservation}
}
Document
IoEduc - Bring Your Own Device to the Classroom

Authors: Miguel Silva, Diogo Ferreira, and Filipe Portela

Published in: OASIcs, Volume 81, First International Computer Programming Education Conference (ICPEC 2020)


Abstract
The evolution of technology brings new challenges to teaching platforms. Students are demanding and want to have dynamic and interactive environments. Classrooms are much more than a simple place to study. Students can work and learn anywhere and anytime they want. Having this reality in consideration emerges the concept of Bring Your Own Device to classrooms. So, in the first instance, it is essential to understand the concept and which tasks can be transported to students devices. After that, it is time to design a new tool capable of answering new teaching demands. ioEduc arises as a platform able to support a unique and interactive way of teaching. This emerging platform was tested during a semester, and the assessment results of utility are promising (0% of negative answers and more than 60% of students consider this tool indispensable to the future).

Cite as

Miguel Silva, Diogo Ferreira, and Filipe Portela. IoEduc - Bring Your Own Device to the Classroom. In First International Computer Programming Education Conference (ICPEC 2020). Open Access Series in Informatics (OASIcs), Volume 81, pp. 23:1-23:9, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2020)


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@InProceedings{silva_et_al:OASIcs.ICPEC.2020.23,
  author =	{Silva, Miguel and Ferreira, Diogo and Portela, Filipe},
  title =	{{IoEduc - Bring Your Own Device to the Classroom}},
  booktitle =	{First International Computer Programming Education Conference (ICPEC 2020)},
  pages =	{23:1--23:9},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-153-5},
  ISSN =	{2190-6807},
  year =	{2020},
  volume =	{81},
  editor =	{Queir\'{o}s, Ricardo and Portela, Filipe and Pinto, M\'{a}rio and Sim\~{o}es, Alberto},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.ICPEC.2020.23},
  URN =		{urn:nbn:de:0030-drops-123100},
  doi =		{10.4230/OASIcs.ICPEC.2020.23},
  annote =	{Keywords: BYOD, ioEduc, Education, e-Learning, Interactive classes, Gamification}
}
Document
Specifying Adaptations through a DSL with an Application to Mobile Robot Navigation

Authors: André C. Santos, João M. P. Cardoso, Pedro C. Diniz, and Diogo R. Ferreira

Published in: OASIcs, Volume 29, 2nd Symposium on Languages, Applications and Technologies (2013)


Abstract
Developing applications for resource-constrained embedded systems is a challenging task specially when applications must adapt to changes in their operating conditions or environment. To ensure an appropriate response at all times, it is highly desirable to develop applications that can dynamically adapt their behavior at run-time. In this paper we introduce an architecture that allows the specification of adaptable behavior through an external, high-level and platform-independent domain-specific language (DSL). The DSL is used here to define adaptation rules that change the run-time behavior of the application depending on various operational factors, such as time constraints. We illustrate the use of the DSL in an application to mobile robot navigation using smartphones, where experimental results highlight the benefits of specifying the adaptable behavior in a flexible and external way to the main application logic.

Cite as

André C. Santos, João M. P. Cardoso, Pedro C. Diniz, and Diogo R. Ferreira. Specifying Adaptations through a DSL with an Application to Mobile Robot Navigation. In 2nd Symposium on Languages, Applications and Technologies. Open Access Series in Informatics (OASIcs), Volume 29, pp. 219-234, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2013)


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@InProceedings{santos_et_al:OASIcs.SLATE.2013.219,
  author =	{Santos, Andr\'{e} C. and Cardoso, Jo\~{a}o M. P. and Diniz, Pedro C. and Ferreira, Diogo R.},
  title =	{{Specifying Adaptations through a DSL with an Application to Mobile Robot Navigation}},
  booktitle =	{2nd Symposium on Languages, Applications and Technologies},
  pages =	{219--234},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-939897-52-1},
  ISSN =	{2190-6807},
  year =	{2013},
  volume =	{29},
  editor =	{Leal, Jos\'{e} Paulo and Rocha, Ricardo and Sim\~{o}es, Alberto},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.SLATE.2013.219},
  URN =		{urn:nbn:de:0030-drops-40403},
  doi =		{10.4230/OASIcs.SLATE.2013.219},
  annote =	{Keywords: Domain-specific language, run-time adaptations, adaptive behavior, embedded systems, mobile robot navigation}
}
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