19 Search Results for "Bonamy, Marthe"


Document
Practical Computation of Graph VC-Dimension

Authors: David Coudert, Mónika Csikós, Guillaume Ducoffe, and Laurent Viennot

Published in: LIPIcs, Volume 301, 22nd International Symposium on Experimental Algorithms (SEA 2024)


Abstract
For any set system ℋ = (V,ℛ), ℛ ⊆ 2^V, a subset S ⊆ V is called shattered if every S' ⊆ S results from the intersection of S with some set in ℛ. The VC-dimension of ℋ is the size of a largest shattered set in V. In this paper, we focus on the problem of computing the VC-dimension of graphs. In particular, given a graph G = (V,E), the VC-dimension of G is defined as the VC-dimension of (V, N), where N contains each subset of V that can be obtained as the closed neighborhood of some vertex v ∈ V in G. Our main contribution is an algorithm for computing the VC-dimension of any graph, whose effectiveness is shown through experiments on various types of practical graphs, including graphs with millions of vertices. A key aspect of its efficiency resides in the fact that practical graphs have small VC-dimension, up to 8 in our experiments. As a side-product, we present several new bounds relating the graph VC-dimension to other classical graph theoretical notions. We also establish the W[1]-hardness of the graph VC-dimension problem by extending a previous result for arbitrary set systems.

Cite as

David Coudert, Mónika Csikós, Guillaume Ducoffe, and Laurent Viennot. Practical Computation of Graph VC-Dimension. In 22nd International Symposium on Experimental Algorithms (SEA 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 301, pp. 8:1-8:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)


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@InProceedings{coudert_et_al:LIPIcs.SEA.2024.8,
  author =	{Coudert, David and Csik\'{o}s, M\'{o}nika and Ducoffe, Guillaume and Viennot, Laurent},
  title =	{{Practical Computation of Graph VC-Dimension}},
  booktitle =	{22nd International Symposium on Experimental Algorithms (SEA 2024)},
  pages =	{8:1--8:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-325-6},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{301},
  editor =	{Liberti, Leo},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SEA.2024.8},
  URN =		{urn:nbn:de:0030-drops-203731},
  doi =		{10.4230/LIPIcs.SEA.2024.8},
  annote =	{Keywords: VC-dimension, graph, algorithm}
}
Document
Track A: Algorithms, Complexity and Games
Tight Bounds on Adjacency Labels for Monotone Graph Classes

Authors: Édouard Bonnet, Julien Duron, John Sylvester, Viktor Zamaraev, and Maksim Zhukovskii

Published in: LIPIcs, Volume 297, 51st International Colloquium on Automata, Languages, and Programming (ICALP 2024)


Abstract
A class of graphs admits an adjacency labeling scheme of size b(n), if the vertices in each of its n-vertex graphs can be assigned binary strings (called labels) of length b(n) so that the adjacency of two vertices can be determined solely from their labels. We give bounds on the size of adjacency labels for every family of monotone (i.e., subgraph-closed) classes with a "well-behaved" growth function between 2^Ω(n log n) and 2^O(n^{2-δ}) for any δ > 0. Specifically, we show that for any function f: ℕ → ℝ satisfying log n ⩽ f(n) ⩽ n^{1-δ} for any fixed δ > 0, and some sub-multiplicativity condition, there are monotone graph classes with growth 2^O(nf(n)) that do not admit adjacency labels of size at most f(n) log n. On the other hand, any such class does admit adjacency labels of size O(f(n)log n). Surprisingly this bound is a Θ(log n) factor away from the information-theoretic bound of Ω(f(n)). Our bounds are tight upto constant factors, and the special case when f = log implies that the recently-refuted Implicit Graph Conjecture [Hatami and Hatami, FOCS 2022] also fails within monotone classes. We further show that the Implicit Graph Conjecture holds for all monotone small classes. In other words, any monotone class with growth rate at most n! cⁿ for some constant c > 0, admits adjacency labels of information-theoretic order optimal size. In fact, we show a more general result that is of independent interest: any monotone small class of graphs has bounded degeneracy. We conjecture that the Implicit Graph Conjecture holds for all hereditary small classes.

Cite as

Édouard Bonnet, Julien Duron, John Sylvester, Viktor Zamaraev, and Maksim Zhukovskii. Tight Bounds on Adjacency Labels for Monotone Graph Classes. In 51st International Colloquium on Automata, Languages, and Programming (ICALP 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 297, pp. 31:1-31:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)


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@InProceedings{bonnet_et_al:LIPIcs.ICALP.2024.31,
  author =	{Bonnet, \'{E}douard and Duron, Julien and Sylvester, John and Zamaraev, Viktor and Zhukovskii, Maksim},
  title =	{{Tight Bounds on Adjacency Labels for Monotone Graph Classes}},
  booktitle =	{51st International Colloquium on Automata, Languages, and Programming (ICALP 2024)},
  pages =	{31:1--31:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-322-5},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{297},
  editor =	{Bringmann, Karl and Grohe, Martin and Puppis, Gabriele and Svensson, Ola},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2024.31},
  URN =		{urn:nbn:de:0030-drops-201741},
  doi =		{10.4230/LIPIcs.ICALP.2024.31},
  annote =	{Keywords: Adjacency labeling, degeneracy, monotone classes, small classes, factorial classes, implicit graph conjecture}
}
Document
Track A: Algorithms, Complexity and Games
Optimal PSPACE-Hardness of Approximating Set Cover Reconfiguration

Authors: Shuichi Hirahara and Naoto Ohsaka

Published in: LIPIcs, Volume 297, 51st International Colloquium on Automata, Languages, and Programming (ICALP 2024)


Abstract
In the Minmax Set Cover Reconfiguration problem, given a set system ℱ over a universe 𝒰 and its two covers 𝒞^start and 𝒞^goal of size k, we wish to transform 𝒞^start into 𝒞^goal by repeatedly adding or removing a single set of ℱ while covering the universe 𝒰 in any intermediate state. Then, the objective is to minimize the maximum size of any intermediate cover during transformation. We prove that Minmax Set Cover Reconfiguration and Minmax Dominating Set Reconfiguration are PSPACE-hard to approximate within a factor of 2-(1/polyloglog N), where N is the size of the universe and the number of vertices in a graph, respectively, improving upon Ohsaka (SODA 2024) [Ohsaka, 2024] and Karthik C. S. and Manurangsi (2023) [Karthik C. S. and Manurangsi, 2023]. This is the first result that exhibits a sharp threshold for the approximation factor of any reconfiguration problem because both problems admit a 2-factor approximation algorithm as per Ito, Demaine, Harvey, Papadimitriou, Sideri, Uehara, and Uno (Theor. Comput. Sci., 2011) [Takehiro Ito et al., 2011]. Our proof is based on a reconfiguration analogue of the FGLSS reduction [Feige et al., 1996] from Probabilistically Checkable Reconfiguration Proofs of Hirahara and Ohsaka (STOC 2024) [Hirahara and Ohsaka, 2024]. We also prove that for any constant ε ∈ (0,1), Minmax Hypergraph Vertex Cover Reconfiguration on poly(ε^-1)-uniform hypergraphs is PSPACE-hard to approximate within a factor of 2-ε.

Cite as

Shuichi Hirahara and Naoto Ohsaka. Optimal PSPACE-Hardness of Approximating Set Cover Reconfiguration. In 51st International Colloquium on Automata, Languages, and Programming (ICALP 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 297, pp. 85:1-85:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)


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@InProceedings{hirahara_et_al:LIPIcs.ICALP.2024.85,
  author =	{Hirahara, Shuichi and Ohsaka, Naoto},
  title =	{{Optimal PSPACE-Hardness of Approximating Set Cover Reconfiguration}},
  booktitle =	{51st International Colloquium on Automata, Languages, and Programming (ICALP 2024)},
  pages =	{85:1--85:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-322-5},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{297},
  editor =	{Bringmann, Karl and Grohe, Martin and Puppis, Gabriele and Svensson, Ola},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2024.85},
  URN =		{urn:nbn:de:0030-drops-202283},
  doi =		{10.4230/LIPIcs.ICALP.2024.85},
  annote =	{Keywords: reconfiguration problems, hardness of approximation, probabilistic proof systems, FGLSS reduction}
}
Document
Minimum Separator Reconfiguration

Authors: Guilherme C. M. Gomes, Clément Legrand-Duchesne, Reem Mahmoud, Amer E. Mouawad, Yoshio Okamoto, Vinicius F. dos Santos, and Tom C. van der Zanden

Published in: LIPIcs, Volume 285, 18th International Symposium on Parameterized and Exact Computation (IPEC 2023)


Abstract
We study the problem of reconfiguring one minimum s-t-separator A into another minimum s-t-separator B in some n-vertex graph G containing two non-adjacent vertices s and t. We consider several variants of the problem as we focus on both the token sliding and token jumping models. Our first contribution is a polynomial-time algorithm that computes (if one exists) a minimum-length sequence of slides transforming A into B. We additionally establish that the existence of a sequence of jumps (which need not be of minimum length) can be decided in polynomial time (by an algorithm that also outputs a witnessing sequence when one exists). In contrast, and somewhat surprisingly, we show that deciding if a sequence of at most 𝓁 jumps can transform A into B is an NP-complete problem. To complement this negative result, we investigate the parameterized complexity of what we believe to be the two most natural parameterized counterparts of the latter problem; in particular, we study the problem of computing a minimum-length sequence of jumps when parameterized by the size k of the minimum s-t-separators and when parameterized by the number 𝓁 of jumps. For the first parameterization, we show that the problem is fixed-parameter tractable, but does not admit a polynomial kernel unless NP ⊆ coNP/poly. We complete the picture by designing a kernel with 𝒪(𝓁²) vertices and edges for the length 𝓁 of the sequence as a parameter.

Cite as

Guilherme C. M. Gomes, Clément Legrand-Duchesne, Reem Mahmoud, Amer E. Mouawad, Yoshio Okamoto, Vinicius F. dos Santos, and Tom C. van der Zanden. Minimum Separator Reconfiguration. In 18th International Symposium on Parameterized and Exact Computation (IPEC 2023). Leibniz International Proceedings in Informatics (LIPIcs), Volume 285, pp. 9:1-9:12, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)


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@InProceedings{c.m.gomes_et_al:LIPIcs.IPEC.2023.9,
  author =	{C. M. Gomes, Guilherme and Legrand-Duchesne, Cl\'{e}ment and Mahmoud, Reem and Mouawad, Amer E. and Okamoto, Yoshio and F. dos Santos, Vinicius and C. van der Zanden, Tom},
  title =	{{Minimum Separator Reconfiguration}},
  booktitle =	{18th International Symposium on Parameterized and Exact Computation (IPEC 2023)},
  pages =	{9:1--9:12},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-305-8},
  ISSN =	{1868-8969},
  year =	{2023},
  volume =	{285},
  editor =	{Misra, Neeldhara and Wahlstr\"{o}m, Magnus},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.IPEC.2023.9},
  URN =		{urn:nbn:de:0030-drops-194288},
  doi =		{10.4230/LIPIcs.IPEC.2023.9},
  annote =	{Keywords: minimum separators, combinatorial reconfiguration, parameterized complexity, kernelization}
}
Document
Invited Talk
Exploring the Space of Colourings with Kempe Changes (Invited Talk)

Authors: Marthe Bonamy

Published in: LIPIcs, Volume 272, 48th International Symposium on Mathematical Foundations of Computer Science (MFCS 2023)


Abstract
Kempe changes were introduced in 1879 in an attempt to prove the 4-colour theorem. They are a convenient if not crucial tool to prove various colouring theorems. Here, we consider how to navigate from a colouring to another through Kempe changes. When is it possible? How fast?

Cite as

Marthe Bonamy. Exploring the Space of Colourings with Kempe Changes (Invited Talk). In 48th International Symposium on Mathematical Foundations of Computer Science (MFCS 2023). Leibniz International Proceedings in Informatics (LIPIcs), Volume 272, pp. 1:1-1:2, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)


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@InProceedings{bonamy:LIPIcs.MFCS.2023.1,
  author =	{Bonamy, Marthe},
  title =	{{Exploring the Space of Colourings with Kempe Changes}},
  booktitle =	{48th International Symposium on Mathematical Foundations of Computer Science (MFCS 2023)},
  pages =	{1:1--1:2},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-292-1},
  ISSN =	{1868-8969},
  year =	{2023},
  volume =	{272},
  editor =	{Leroux, J\'{e}r\^{o}me and Lombardy, Sylvain and Peleg, David},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.MFCS.2023.1},
  URN =		{urn:nbn:de:0030-drops-185350},
  doi =		{10.4230/LIPIcs.MFCS.2023.1},
  annote =	{Keywords: Graph theory, graph coloring, reconfiguration}
}
Document
Galactic Token Sliding

Authors: Valentin Bartier, Nicolas Bousquet, and Amer E. Mouawad

Published in: LIPIcs, Volume 244, 30th Annual European Symposium on Algorithms (ESA 2022)


Abstract
Given a graph G and two independent sets I_s and I_t of size k, the Independent Set Reconfiguration problem asks whether there exists a sequence of independent sets (each of size k) I_s = I₀, I₁, I₂, …, I_𝓁 = I_t such that each independent set is obtained from the previous one using a so-called reconfiguration step. Viewing each independent set as a collection of k tokens placed on the vertices of a graph G, the two most studied reconfiguration steps are token jumping and token sliding. In the Token Jumping variant of the problem, a single step allows a token to jump from one vertex to any other vertex in the graph. In the Token Sliding variant, a token is only allowed to slide from a vertex to one of its neighbors. Like the Independent Set problem, both of the aforementioned problems are known to be W[1]-hard on general graphs (for parameter k). A very fruitful line of research [Bodlaender, 1988; Grohe et al., 2017; Telle and Villanger, 2019; Pilipczuk and Siebertz, 2021] has showed that the Independent Set problem becomes fixed-parameter tractable when restricted to sparse graph classes, such as planar, bounded treewidth, nowhere-dense, and all the way to biclique-free graphs. Over a series of papers, the same was shown to hold for the Token Jumping problem [Ito et al., 2014; Lokshtanov et al., 2018; Siebertz, 2018; Bousquet et al., 2017]. As for the Token Sliding problem, which is mentioned in most of these papers, almost nothing is known beyond the fact that the problem is polynomial-time solvable on trees [Demaine et al., 2015] and interval graphs [Marthe Bonamy and Nicolas Bousquet, 2017]. We remedy this situation by introducing a new model for the reconfiguration of independent sets, which we call galactic reconfiguration. Using this new model, we show that (standard) Token Sliding is fixed-parameter tractable on graphs of bounded degree, planar graphs, and chordal graphs of bounded clique number. We believe that the galactic reconfiguration model is of independent interest and could potentially help in resolving the remaining open questions concerning the (parameterized) complexity of Token Sliding.

Cite as

Valentin Bartier, Nicolas Bousquet, and Amer E. Mouawad. Galactic Token Sliding. In 30th Annual European Symposium on Algorithms (ESA 2022). Leibniz International Proceedings in Informatics (LIPIcs), Volume 244, pp. 15:1-15:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2022)


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@InProceedings{bartier_et_al:LIPIcs.ESA.2022.15,
  author =	{Bartier, Valentin and Bousquet, Nicolas and Mouawad, Amer E.},
  title =	{{Galactic Token Sliding}},
  booktitle =	{30th Annual European Symposium on Algorithms (ESA 2022)},
  pages =	{15:1--15:14},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-247-1},
  ISSN =	{1868-8969},
  year =	{2022},
  volume =	{244},
  editor =	{Chechik, Shiri and Navarro, Gonzalo and Rotenberg, Eva and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2022.15},
  URN =		{urn:nbn:de:0030-drops-169535},
  doi =		{10.4230/LIPIcs.ESA.2022.15},
  annote =	{Keywords: reconfiguration, independent set, galactic reconfiguration, sparse graphs, token sliding, parameterized complexity}
}
Document
Track B: Automata, Logic, Semantics, and Theory of Programming
On the Size of Good-For-Games Rabin Automata and Its Link with the Memory in Muller Games

Authors: Antonio Casares, Thomas Colcombet, and Karoliina Lehtinen

Published in: LIPIcs, Volume 229, 49th International Colloquium on Automata, Languages, and Programming (ICALP 2022)


Abstract
In this paper, we look at good-for-games Rabin automata that recognise a Muller language (a language that is entirely characterised by the set of letters that appear infinitely often in each word). We establish that minimal such automata are exactly of the same size as the minimal memory required for winning Muller games that have this language as their winning condition. We show how to effectively construct such minimal automata. Finally, we establish that these automata can be exponentially more succinct than equivalent deterministic ones, thus proving as a consequence that chromatic memory for winning a Muller game can be exponentially larger than unconstrained memory.

Cite as

Antonio Casares, Thomas Colcombet, and Karoliina Lehtinen. On the Size of Good-For-Games Rabin Automata and Its Link with the Memory in Muller Games. In 49th International Colloquium on Automata, Languages, and Programming (ICALP 2022). Leibniz International Proceedings in Informatics (LIPIcs), Volume 229, pp. 117:1-117:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2022)


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@InProceedings{casares_et_al:LIPIcs.ICALP.2022.117,
  author =	{Casares, Antonio and Colcombet, Thomas and Lehtinen, Karoliina},
  title =	{{On the Size of Good-For-Games Rabin Automata and Its Link with the Memory in Muller Games}},
  booktitle =	{49th International Colloquium on Automata, Languages, and Programming (ICALP 2022)},
  pages =	{117:1--117:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-235-8},
  ISSN =	{1868-8969},
  year =	{2022},
  volume =	{229},
  editor =	{Boja\'{n}czyk, Miko{\l}aj and Merelli, Emanuela and Woodruff, David P.},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2022.117},
  URN =		{urn:nbn:de:0030-drops-164580},
  doi =		{10.4230/LIPIcs.ICALP.2022.117},
  annote =	{Keywords: Infinite duration games, Muller games, Rabin conditions, omega-regular languages, memory in games, good-for-games automata}
}
Document
Distributed Recoloring of Interval and Chordal Graphs

Authors: Nicolas Bousquet, Laurent Feuilloley, Marc Heinrich, and Mikaël Rabie

Published in: LIPIcs, Volume 217, 25th International Conference on Principles of Distributed Systems (OPODIS 2021)


Abstract
One of the fundamental and most-studied algorithmic problems in distributed computing on networks is graph coloring, both in bounded-degree and in general graphs. Recently, the study of this problem has been extended in two directions. First, the problem of recoloring, that is computing an efficient transformation between two given colorings (instead of computing a new coloring), has been considered, both to model radio network updates, and as a useful subroutine for coloring. Second, as it appears that general graphs and bounded-degree graphs do not model real networks very well (with, respectively, pathological worst-case topologies and too strong assumptions), coloring has been studied in more specific graph classes. In this paper, we study the intersection of these two directions: distributed recoloring in two relevant graph classes, interval and chordal graphs. More formally, the question of recoloring a graph is as follows: we are given a network, an input coloring α and a target coloring β, and we want to find a schedule of colorings to reach β starting from α. In a distributed setting, the schedule needs to be found within the LOCAL model, where nodes communicate with their direct neighbors synchronously. The question we want to answer is: how many rounds of communication {are} needed to produce a schedule, and what is the length of this schedule? In the case of interval and chordal graphs, we prove that, if we have less than 2ω colors, ω being the size of the largest clique, extra colors will be needed in the intermediate colorings. For interval graphs, we produce a schedule after O(poly(Δ)log*n) rounds of communication, and for chordal graphs, we need O(ω²Δ²log n) rounds to get one. Our techniques also improve classic coloring algorithms. Namely, we get ω+1-colorings of interval graphs in O(ωlog*n) rounds and of chordal graphs in O(ωlog n) rounds, which improves on previous known algorithms that use ω+2 colors for the same running times.

Cite as

Nicolas Bousquet, Laurent Feuilloley, Marc Heinrich, and Mikaël Rabie. Distributed Recoloring of Interval and Chordal Graphs. In 25th International Conference on Principles of Distributed Systems (OPODIS 2021). Leibniz International Proceedings in Informatics (LIPIcs), Volume 217, pp. 19:1-19:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2022)


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@InProceedings{bousquet_et_al:LIPIcs.OPODIS.2021.19,
  author =	{Bousquet, Nicolas and Feuilloley, Laurent and Heinrich, Marc and Rabie, Mika\"{e}l},
  title =	{{Distributed Recoloring of Interval and Chordal Graphs}},
  booktitle =	{25th International Conference on Principles of Distributed Systems (OPODIS 2021)},
  pages =	{19:1--19:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-219-8},
  ISSN =	{1868-8969},
  year =	{2022},
  volume =	{217},
  editor =	{Bramas, Quentin and Gramoli, Vincent and Milani, Alessia},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.OPODIS.2021.19},
  URN =		{urn:nbn:de:0030-drops-157941},
  doi =		{10.4230/LIPIcs.OPODIS.2021.19},
  annote =	{Keywords: Distributed coloring, distributed recoloring, interval graphs, chordal graphs, intersection graphs}
}
Document
A Tight Local Algorithm for the Minimum Dominating Set Problem in Outerplanar Graphs

Authors: Marthe Bonamy, Linda Cook, Carla Groenland, and Alexandra Wesolek

Published in: LIPIcs, Volume 209, 35th International Symposium on Distributed Computing (DISC 2021)


Abstract
We show that there is a deterministic local algorithm (constant-time distributed graph algorithm) that finds a 5-approximation of a minimum dominating set on outerplanar graphs. We show there is no such algorithm that finds a (5-ε)-approximation, for any ε > 0. Our algorithm only requires knowledge of the degree of a vertex and of its neighbors, so that large messages and unique identifiers are not needed.

Cite as

Marthe Bonamy, Linda Cook, Carla Groenland, and Alexandra Wesolek. A Tight Local Algorithm for the Minimum Dominating Set Problem in Outerplanar Graphs. In 35th International Symposium on Distributed Computing (DISC 2021). Leibniz International Proceedings in Informatics (LIPIcs), Volume 209, pp. 13:1-13:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2021)


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@InProceedings{bonamy_et_al:LIPIcs.DISC.2021.13,
  author =	{Bonamy, Marthe and Cook, Linda and Groenland, Carla and Wesolek, Alexandra},
  title =	{{A Tight Local Algorithm for the Minimum Dominating Set Problem in Outerplanar Graphs}},
  booktitle =	{35th International Symposium on Distributed Computing (DISC 2021)},
  pages =	{13:1--13:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-210-5},
  ISSN =	{1868-8969},
  year =	{2021},
  volume =	{209},
  editor =	{Gilbert, Seth},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.DISC.2021.13},
  URN =		{urn:nbn:de:0030-drops-148159},
  doi =		{10.4230/LIPIcs.DISC.2021.13},
  annote =	{Keywords: Outerplanar graphs, dominating set, LOCAL model, constant-factor approximation algorithm}
}
Document
A Graph-Theoretic Barcode Ordering Model for Linked-Reads

Authors: Yoann Dufresne, Chen Sun, Pierre Marijon, Dominique Lavenier, Cedric Chauve, and Rayan Chikhi

Published in: LIPIcs, Volume 172, 20th International Workshop on Algorithms in Bioinformatics (WABI 2020)


Abstract
Considering a set of intervals on the real line, an interval graph records these intervals as nodes and their intersections as edges. Identifying (i.e. merging) pairs of nodes in an interval graph results in a multiple-interval graph. Given only the nodes and the edges of the multiple-interval graph without knowing the underlying intervals, we are interested in the following questions. Can one determine how many intervals correspond to each node? Can one compute a walk over the multiple-interval graph nodes that reflects the ordering of the original intervals? These questions are closely related to linked-read DNA sequencing, where barcodes are assigned to long molecules whose intersection graph forms an interval graph. Each barcode may correspond to multiple molecules, which complicates downstream analysis, and corresponds to the identification of nodes of the corresponding interval graph. Resolving the above graph-theoretic problems would facilitate analyses of linked-reads sequencing data, through enabling the conceptual separation of barcodes into molecules and providing, through the molecules order, a skeleton for accurately assembling the genome. Here, we propose a framework that takes as input an arbitrary intersection graph (such as an overlap graph of barcodes) and constructs a heuristic approximation of the ordering of the original intervals.

Cite as

Yoann Dufresne, Chen Sun, Pierre Marijon, Dominique Lavenier, Cedric Chauve, and Rayan Chikhi. A Graph-Theoretic Barcode Ordering Model for Linked-Reads. In 20th International Workshop on Algorithms in Bioinformatics (WABI 2020). Leibniz International Proceedings in Informatics (LIPIcs), Volume 172, pp. 11:1-11:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2020)


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@InProceedings{dufresne_et_al:LIPIcs.WABI.2020.11,
  author =	{Dufresne, Yoann and Sun, Chen and Marijon, Pierre and Lavenier, Dominique and Chauve, Cedric and Chikhi, Rayan},
  title =	{{A Graph-Theoretic Barcode Ordering Model for Linked-Reads}},
  booktitle =	{20th International Workshop on Algorithms in Bioinformatics (WABI 2020)},
  pages =	{11:1--11:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-161-0},
  ISSN =	{1868-8969},
  year =	{2020},
  volume =	{172},
  editor =	{Kingsford, Carl and Pisanti, Nadia},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2020.11},
  URN =		{urn:nbn:de:0030-drops-128001},
  doi =		{10.4230/LIPIcs.WABI.2020.11},
  annote =	{Keywords: DNA sequencing, graph algorithms, linked-reads, interval graphs, cliques}
}
Document
Shortest Reconfiguration of Colorings Under Kempe Changes

Authors: Marthe Bonamy, Marc Heinrich, Takehiro Ito, Yusuke Kobayashi, Haruka Mizuta, Moritz Mühlenthaler, Akira Suzuki, and Kunihiro Wasa

Published in: LIPIcs, Volume 154, 37th International Symposium on Theoretical Aspects of Computer Science (STACS 2020)


Abstract
A k-coloring of a graph maps each vertex of the graph to a color in {1, 2, …, k}, such that no two adjacent vertices receive the same color. Given a k-coloring of a graph, a Kempe change produces a new k-coloring by swapping the colors in a bicolored connected component. We investigate the complexity of finding the smallest number of Kempe changes needed to transform a given k-coloring into another given k-coloring. We show that this problem admits a polynomial-time dynamic programming algorithm on path graphs, which turns out to be highly non-trivial. Furthermore, the problem is NP-hard even on star graphs and we show that on such graphs it admits a constant-factor approximation algorithm and is fixed-parameter tractable when parameterized by the number k of colors. The hardness result as well as the algorithmic results are based on the notion of a canonical transformation.

Cite as

Marthe Bonamy, Marc Heinrich, Takehiro Ito, Yusuke Kobayashi, Haruka Mizuta, Moritz Mühlenthaler, Akira Suzuki, and Kunihiro Wasa. Shortest Reconfiguration of Colorings Under Kempe Changes. In 37th International Symposium on Theoretical Aspects of Computer Science (STACS 2020). Leibniz International Proceedings in Informatics (LIPIcs), Volume 154, pp. 35:1-35:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2020)


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@InProceedings{bonamy_et_al:LIPIcs.STACS.2020.35,
  author =	{Bonamy, Marthe and Heinrich, Marc and Ito, Takehiro and Kobayashi, Yusuke and Mizuta, Haruka and M\"{u}hlenthaler, Moritz and Suzuki, Akira and Wasa, Kunihiro},
  title =	{{Shortest Reconfiguration of Colorings Under Kempe Changes}},
  booktitle =	{37th International Symposium on Theoretical Aspects of Computer Science (STACS 2020)},
  pages =	{35:1--35:14},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-140-5},
  ISSN =	{1868-8969},
  year =	{2020},
  volume =	{154},
  editor =	{Paul, Christophe and Bl\"{a}ser, Markus},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2020.35},
  URN =		{urn:nbn:de:0030-drops-118961},
  doi =		{10.4230/LIPIcs.STACS.2020.35},
  annote =	{Keywords: Combinatorial Reconfiguration, Graph Algorithms, Graph Coloring, Kempe Equivalence}
}
Document
The Perfect Matching Reconfiguration Problem

Authors: Marthe Bonamy, Nicolas Bousquet, Marc Heinrich, Takehiro Ito, Yusuke Kobayashi, Arnaud Mary, Moritz Mühlenthaler, and Kunihiro Wasa

Published in: LIPIcs, Volume 138, 44th International Symposium on Mathematical Foundations of Computer Science (MFCS 2019)


Abstract
We study the perfect matching reconfiguration problem: Given two perfect matchings of a graph, is there a sequence of flip operations that transforms one into the other? Here, a flip operation exchanges the edges in an alternating cycle of length four. We are interested in the complexity of this decision problem from the viewpoint of graph classes. We first prove that the problem is PSPACE-complete even for split graphs and for bipartite graphs of bounded bandwidth with maximum degree five. We then investigate polynomial-time solvable cases. Specifically, we prove that the problem is solvable in polynomial time for strongly orderable graphs (that include interval graphs and strongly chordal graphs), for outerplanar graphs, and for cographs (also known as P_4-free graphs). Furthermore, for each yes-instance from these graph classes, we show that a linear number of flip operations is sufficient and we can exhibit a corresponding sequence of flip operations in polynomial time.

Cite as

Marthe Bonamy, Nicolas Bousquet, Marc Heinrich, Takehiro Ito, Yusuke Kobayashi, Arnaud Mary, Moritz Mühlenthaler, and Kunihiro Wasa. The Perfect Matching Reconfiguration Problem. In 44th International Symposium on Mathematical Foundations of Computer Science (MFCS 2019). Leibniz International Proceedings in Informatics (LIPIcs), Volume 138, pp. 80:1-80:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2019)


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@InProceedings{bonamy_et_al:LIPIcs.MFCS.2019.80,
  author =	{Bonamy, Marthe and Bousquet, Nicolas and Heinrich, Marc and Ito, Takehiro and Kobayashi, Yusuke and Mary, Arnaud and M\"{u}hlenthaler, Moritz and Wasa, Kunihiro},
  title =	{{The Perfect Matching Reconfiguration Problem}},
  booktitle =	{44th International Symposium on Mathematical Foundations of Computer Science (MFCS 2019)},
  pages =	{80:1--80:14},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-117-7},
  ISSN =	{1868-8969},
  year =	{2019},
  volume =	{138},
  editor =	{Rossmanith, Peter and Heggernes, Pinar and Katoen, Joost-Pieter},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.MFCS.2019.80},
  URN =		{urn:nbn:de:0030-drops-110248},
  doi =		{10.4230/LIPIcs.MFCS.2019.80},
  annote =	{Keywords: Combinatorial Reconfiguration, Graph Algorithms, Perfect Matching}
}
Document
Reachability for Bounded Branching VASS

Authors: Filip Mazowiecki and Michał Pilipczuk

Published in: LIPIcs, Volume 140, 30th International Conference on Concurrency Theory (CONCUR 2019)


Abstract
In this paper we consider the reachability problem for bounded branching VASS. Bounded VASS are a variant of the classic VASS model where all values in all configurations are upper bounded by a fixed natural number, encoded in binary in the input. This model gained a lot of attention in 2012 when Haase et al. showed its connections with timed automata. Later in 2013 Fearnley and Jurdziński proved that the reachability problem in this model is PSPACE-complete even in dimension 1. Here, we investigate the complexity of the reachability problem when the model is extended with branching transitions, and we prove that the problem is EXPTIME-complete when the dimension is 2 or larger.

Cite as

Filip Mazowiecki and Michał Pilipczuk. Reachability for Bounded Branching VASS. In 30th International Conference on Concurrency Theory (CONCUR 2019). Leibniz International Proceedings in Informatics (LIPIcs), Volume 140, pp. 28:1-28:13, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2019)


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@InProceedings{mazowiecki_et_al:LIPIcs.CONCUR.2019.28,
  author =	{Mazowiecki, Filip and Pilipczuk, Micha{\l}},
  title =	{{Reachability for Bounded Branching VASS}},
  booktitle =	{30th International Conference on Concurrency Theory (CONCUR 2019)},
  pages =	{28:1--28:13},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-121-4},
  ISSN =	{1868-8969},
  year =	{2019},
  volume =	{140},
  editor =	{Fokkink, Wan and van Glabbeek, Rob},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CONCUR.2019.28},
  URN =		{urn:nbn:de:0030-drops-109303},
  doi =		{10.4230/LIPIcs.CONCUR.2019.28},
  annote =	{Keywords: Branching VASS, counter machines, reachability problem, bobrvass}
}
Document
Enumerating Minimal Dominating Sets in Triangle-Free Graphs

Authors: Marthe Bonamy, Oscar Defrain, Marc Heinrich, and Jean-Florent Raymond

Published in: LIPIcs, Volume 126, 36th International Symposium on Theoretical Aspects of Computer Science (STACS 2019)


Abstract
It is a long-standing open problem whether the minimal dominating sets of a graph can be enumerated in output-polynomial time. In this paper we prove that this is the case in triangle-free graphs. This answers a question of Kanté et al. Additionally, we show that deciding if a set of vertices of a bipartite graph can be completed into a minimal dominating set is a NP-complete problem.

Cite as

Marthe Bonamy, Oscar Defrain, Marc Heinrich, and Jean-Florent Raymond. Enumerating Minimal Dominating Sets in Triangle-Free Graphs. In 36th International Symposium on Theoretical Aspects of Computer Science (STACS 2019). Leibniz International Proceedings in Informatics (LIPIcs), Volume 126, pp. 16:1-16:12, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2019)


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@InProceedings{bonamy_et_al:LIPIcs.STACS.2019.16,
  author =	{Bonamy, Marthe and Defrain, Oscar and Heinrich, Marc and Raymond, Jean-Florent},
  title =	{{Enumerating Minimal Dominating Sets in Triangle-Free Graphs}},
  booktitle =	{36th International Symposium on Theoretical Aspects of Computer Science (STACS 2019)},
  pages =	{16:1--16:12},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-100-9},
  ISSN =	{1868-8969},
  year =	{2019},
  volume =	{126},
  editor =	{Niedermeier, Rolf and Paul, Christophe},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2019.16},
  URN =		{urn:nbn:de:0030-drops-102557},
  doi =		{10.4230/LIPIcs.STACS.2019.16},
  annote =	{Keywords: Enumeration algorithms, output-polynomial algorithms, minimal dominating set, triangle-free graphs, split graphs}
}
Document
Distributed Recoloring

Authors: Marthe Bonamy, Paul Ouvrard, Mikaël Rabie, Jukka Suomela, and Jara Uitto

Published in: LIPIcs, Volume 121, 32nd International Symposium on Distributed Computing (DISC 2018)


Abstract
Given two colorings of a graph, we consider the following problem: can we recolor the graph from one coloring to the other through a series of elementary changes, such that the graph is properly colored after each step? We introduce the notion of distributed recoloring: The input graph represents a network of computers that needs to be recolored. Initially, each node is aware of its own input color and target color. The nodes can exchange messages with each other, and eventually each node has to stop and output its own recoloring schedule, indicating when and how the node changes its color. The recoloring schedules have to be globally consistent so that the graph remains properly colored at each point, and we require that adjacent nodes do not change their colors simultaneously. We are interested in the following questions: How many communication rounds are needed (in the deterministic LOCAL model of distributed computing) to find a recoloring schedule? What is the length of the recoloring schedule? And how does the picture change if we can use extra colors to make recoloring easier? The main contributions of this work are related to distributed recoloring with one extra color in the following graph classes: trees, 3-regular graphs, and toroidal grids.

Cite as

Marthe Bonamy, Paul Ouvrard, Mikaël Rabie, Jukka Suomela, and Jara Uitto. Distributed Recoloring. In 32nd International Symposium on Distributed Computing (DISC 2018). Leibniz International Proceedings in Informatics (LIPIcs), Volume 121, pp. 12:1-12:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2018)


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@InProceedings{bonamy_et_al:LIPIcs.DISC.2018.12,
  author =	{Bonamy, Marthe and Ouvrard, Paul and Rabie, Mika\"{e}l and Suomela, Jukka and Uitto, Jara},
  title =	{{Distributed Recoloring}},
  booktitle =	{32nd International Symposium on Distributed Computing (DISC 2018)},
  pages =	{12:1--12:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-092-7},
  ISSN =	{1868-8969},
  year =	{2018},
  volume =	{121},
  editor =	{Schmid, Ulrich and Widder, Josef},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.DISC.2018.12},
  URN =		{urn:nbn:de:0030-drops-98012},
  doi =		{10.4230/LIPIcs.DISC.2018.12},
  annote =	{Keywords: Distributed Systems, Graph Algorithms, Local Computations}
}
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