16 Search Results for "Gross, Markus"


Document
Simplicial Approximation to CW Complexes with Spherical Delaunay Triangulations

Authors: Raphaël Tinarrage

Published in: LIPIcs, Volume 367, 42nd International Symposium on Computational Geometry (SoCG 2026)


Abstract
Simplicial approximation provides a framework for constructing simplicial complexes that are homotopy equivalent to a given manifold, provided a CW structure is explicitly known. However, its conventional implementation quickly becomes intractable on a computer: barycentric subdivision produces poorly shaped simplices, and the star condition introduces many vertices. To address these limitations, this article develops a subdivision scheme based on spherical Delaunay triangulations, which attains better refinement properties than barycentric subdivisions. Moreover, the star condition is reframed as two independent problems, one geometric and the other combinatorial, respectively tackled in the language of locally equiconnected spaces and the list homomorphism problem, allowing an exponential reduction in the number of vertices. Via a prototype implementation, we obtain simplicial complexes homotopy equivalent to Grassmannians and Stiefel manifolds up to dimension 5.

Cite as

Raphaël Tinarrage. Simplicial Approximation to CW Complexes with Spherical Delaunay Triangulations. In 42nd International Symposium on Computational Geometry (SoCG 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 367, pp. 93:1-93:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{tinarrage:LIPIcs.SoCG.2026.93,
  author =	{Tinarrage, Rapha\"{e}l},
  title =	{{Simplicial Approximation to CW Complexes with Spherical Delaunay Triangulations}},
  booktitle =	{42nd International Symposium on Computational Geometry (SoCG 2026)},
  pages =	{93:1--93:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-418-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{367},
  editor =	{Ahn, Hee-Kap and Hoffmann, Michael and Nayyeri, Amir},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2026.93},
  URN =		{urn:nbn:de:0030-drops-258991},
  doi =		{10.4230/LIPIcs.SoCG.2026.93},
  annote =	{Keywords: Triangulation of manifolds, Simplicial approximation, CW complexes, Delaunay complexes, List homomorphism problem, Topological Data Analysis}
}
Document
CG Challenge
ETH Flippers Approach to Parallel Reconfiguration of Triangulations: SAT Formulation and Heuristics (CG Challenge)

Authors: Lorenzo Battini and Marko Milenković

Published in: LIPIcs, Volume 367, 42nd International Symposium on Computational Geometry (SoCG 2026)


Abstract
We describe the algorithms used by the ETH Flippers team in the CG:SHOP 2026 Challenge. Each instance consists of a set of triangulations on a common point set, and the objective is to find a central triangulation that minimizes the total parallel flip distance to the input set. Our strategy combines an exact solver for small and medium-sized instances with a suite of heuristics for larger instances. For the exact approach, we formulate the problem as a SAT instance with XOR clauses to model edge transitions across multiple rounds, further optimized by lower bounds derived from exact pairwise distances. For larger instances, we use a greedy local search and edge-coloring techniques to identify maximal sets of independent flips. Our approach ranked second overall and first in the junior category, computing provably optimal solutions for 186 out of 250 instances.

Cite as

Lorenzo Battini and Marko Milenković. ETH Flippers Approach to Parallel Reconfiguration of Triangulations: SAT Formulation and Heuristics (CG Challenge). In 42nd International Symposium on Computational Geometry (SoCG 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 367, pp. 105:1-105:6, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{battini_et_al:LIPIcs.SoCG.2026.105,
  author =	{Battini, Lorenzo and Milenkovi\'{c}, Marko},
  title =	{{ETH Flippers Approach to Parallel Reconfiguration of Triangulations: SAT Formulation and Heuristics}},
  booktitle =	{42nd International Symposium on Computational Geometry (SoCG 2026)},
  pages =	{105:1--105:6},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-418-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{367},
  editor =	{Ahn, Hee-Kap and Hoffmann, Michael and Nayyeri, Amir},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2026.105},
  URN =		{urn:nbn:de:0030-drops-259115},
  doi =		{10.4230/LIPIcs.SoCG.2026.105},
  annote =	{Keywords: exact solution, heuristic, SAT solver, XOR clauses, computational geometry}
}
Document
SwiftQueue: Optimizing Low-Latency Applications with Swift Packet Queuing

Authors: Siddhant Ray, Xi Jiang, Jack Luo, Nick Feamster, and Junchen Jiang

Published in: OASIcs, Volume 139, 1st New Ideas in Networked Systems (NINeS 2026)


Abstract
Low Latency, Low Loss, and Scalable Throughput (L4S), as an emerging router-queue management technique, has seen steady deployment in the industry. An L4S-enabled router assigns each packet to the queue based on the packet header marking. Currently, L4S employs per-flow queue selection, i.e., all packets of a flow are marked the same way and thus use the same queues, even though each packet is marked separately. However, this may hurt tail latency and latency-sensitive applications because transient congestion and queue buildups may only affect a fraction of packets in a flow. We present SwiftQueue, a new L4S queue-selection strategy in which a sender uses a novel per-packet latency predictor to pinpoint which packets likely have latency spikes or drops. The insight is that many packet-level latency variations result from complex interactions among recent packets at shared router queues. Yet, these intricate packet-level latency patterns are hard to learn efficiently by traditional models. Instead, SwiftQueue uses a custom Transformer, which is well-studied for its expressiveness on sequential patterns, to predict the next packet’s latency based on the latencies of recently received ACKs. Based on the predicted latency of each outgoing packet, SwiftQueue’s sender dynamically marks the L4S packet header to assign packets to potentially different queues, even within the same flow. Using real network traces, we show that SwiftQueue is 45-65% more accurate in predicting latency and its variations than state-of-art methods. Based on its latency prediction, SwiftQueue reduces the tail latency for L4S-enabled flows by 36-45%, compared with the existing L4S queue-selection method.

Cite as

Siddhant Ray, Xi Jiang, Jack Luo, Nick Feamster, and Junchen Jiang. SwiftQueue: Optimizing Low-Latency Applications with Swift Packet Queuing. In 1st New Ideas in Networked Systems (NINeS 2026). Open Access Series in Informatics (OASIcs), Volume 139, pp. 24:1-24:29, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{ray_et_al:OASIcs.NINeS.2026.24,
  author =	{Ray, Siddhant and Jiang, Xi and Luo, Jack and Feamster, Nick and Jiang, Junchen},
  title =	{{SwiftQueue: Optimizing Low-Latency Applications with Swift Packet Queuing}},
  booktitle =	{1st New Ideas in Networked Systems (NINeS 2026)},
  pages =	{24:1--24:29},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-414-7},
  ISSN =	{2190-6807},
  year =	{2026},
  volume =	{139},
  editor =	{Argyraki, Katerina and Panda, Aurojit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.NINeS.2026.24},
  URN =		{urn:nbn:de:0030-drops-256093},
  doi =		{10.4230/OASIcs.NINeS.2026.24},
  annote =	{Keywords: Latency prediction, L4S Queue Management}
}
Document
Research
Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web

Authors: Florian Ruosch, Cristina Sarasua, and Abraham Bernstein

Published in: TGDK, Volume 3, Issue 3 (2025). Transactions on Graph Data and Knowledge, Volume 3, Issue 3


Abstract
In Argument Mining, predicting argumentative relations between texts (or spans) remains one of the most challenging aspects, even more so in the cross-document setting. This paper makes three key contributions to advance research in this domain. We first extend an existing dataset, the Sci-Arg corpus, by annotating it with explicit inter-document argumentative relations, thereby allowing arguments to be distributed over several documents forming an Argument Web; these new annotations are published using Semantic Web technologies (RDF, OWL). Second, we explore and evaluate three automated approaches for predicting these inter-document argumentative relations, establishing critical baselines on the new dataset. We find that a simple classifier based on discourse indicators with access to context outperforms neural methods. Third, we conduct a comparative analysis of these approaches for both intra- and inter-document settings, identifying statistically significant differences in results that indicate the necessity of distinguishing between these two scenarios. Our findings highlight significant challenges in this complex domain and open crucial avenues for future research on the Argument Web of Science, particularly for those interested in leveraging Semantic Web technologies and knowledge graphs to understand scholarly discourse. With this, we provide the first stepping stones in the form of a benchmark dataset, three baseline methods, and an initial analysis for a systematic exploration of this field relevant to the Web of Data and Science.

Cite as

Florian Ruosch, Cristina Sarasua, and Abraham Bernstein. Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web. In Transactions on Graph Data and Knowledge (TGDK), Volume 3, Issue 3, pp. 4:1-4:33, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@Article{ruosch_et_al:TGDK.3.3.4,
  author =	{Ruosch, Florian and Sarasua, Cristina and Bernstein, Abraham},
  title =	{{Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{4:1--4:33},
  ISSN =	{2942-7517},
  year =	{2025},
  volume =	{3},
  number =	{3},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.3.3.4},
  URN =		{urn:nbn:de:0030-drops-252159},
  doi =		{10.4230/TGDK.3.3.4},
  annote =	{Keywords: Argument Mining, Large Language Models, Knowledge Graphs, Link Prediction}
}
Document
GradSTL: Comprehensive Signal Temporal Logic for Neurosymbolic Reasoning and Learning

Authors: Mark Chevallier, Filip Smola, Richard Schmoetten, and Jacques D. Fleuriot

Published in: LIPIcs, Volume 355, 32nd International Symposium on Temporal Representation and Reasoning (TIME 2025)


Abstract
We present GradSTL, the first fully comprehensive implementation of signal temporal logic (STL) suitable for integration with neurosymbolic learning. In particular, GradSTL can successfully evaluate any STL constraint over any signal, regardless of how it is sampled. Our formally verified approach specifies smooth STL semantics over tensors, with formal proofs of soundness and of correctness of its derivative function. Our implementation is generated automatically from this formalisation, without manual coding, guaranteeing correctness by construction. We show via a case study that using our implementation, a neurosymbolic process learns to satisfy a pre-specified STL constraint. Our approach offers a highly rigorous foundation for integrating signal temporal logic and learning by gradient descent.

Cite as

Mark Chevallier, Filip Smola, Richard Schmoetten, and Jacques D. Fleuriot. GradSTL: Comprehensive Signal Temporal Logic for Neurosymbolic Reasoning and Learning. In 32nd International Symposium on Temporal Representation and Reasoning (TIME 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 355, pp. 6:1-6:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{chevallier_et_al:LIPIcs.TIME.2025.6,
  author =	{Chevallier, Mark and Smola, Filip and Schmoetten, Richard and Fleuriot, Jacques D.},
  title =	{{GradSTL: Comprehensive Signal Temporal Logic for Neurosymbolic Reasoning and Learning}},
  booktitle =	{32nd International Symposium on Temporal Representation and Reasoning (TIME 2025)},
  pages =	{6:1--6:14},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-401-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{355},
  editor =	{Vidal, Thierry and Wa{\l}\k{e}ga, Przemys{\l}aw Andrzej},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.TIME.2025.6},
  URN =		{urn:nbn:de:0030-drops-244528},
  doi =		{10.4230/LIPIcs.TIME.2025.6},
  annote =	{Keywords: Signal temporal logic, spatio-temporal reasoning, neurosymbolic learning}
}
Document
Formalizing Colimits in 𝒞at

Authors: Mario Carneiro and Emily Riehl

Published in: LIPIcs, Volume 352, 16th International Conference on Interactive Theorem Proving (ITP 2025)


Abstract
Certain results involving "higher structures" are not currently accessible to computer formalization because the prerequisite ∞-category theory has not been formalized. To support future work on formalizing ∞-category theory in Lean’s mathematics library, we formalize some fundamental constructions involving the 1-category of categories. Specifically, we construct the left adjoint to the nerve embedding of categories into simplicial sets, defining the homotopy category functor. We prove further that this adjunction is reflective, which allows us to conclude that 𝒞at has colimits. To our knowledge this is the first formalized proof that the nerve functor is a fully faithful right adjoint and that the category of categories is cocomplete.

Cite as

Mario Carneiro and Emily Riehl. Formalizing Colimits in 𝒞at. In 16th International Conference on Interactive Theorem Proving (ITP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 352, pp. 20:1-20:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{carneiro_et_al:LIPIcs.ITP.2025.20,
  author =	{Carneiro, Mario and Riehl, Emily},
  title =	{{Formalizing Colimits in 𝒞at}},
  booktitle =	{16th International Conference on Interactive Theorem Proving (ITP 2025)},
  pages =	{20:1--20:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-396-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{352},
  editor =	{Forster, Yannick and Keller, Chantal},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITP.2025.20},
  URN =		{urn:nbn:de:0030-drops-246186},
  doi =		{10.4230/LIPIcs.ITP.2025.20},
  annote =	{Keywords: category theory, infinity-category theory, nerve, simplicial set, colimit}
}
Document
Efficient Quantum Pseudorandomness from Hamiltonian Phase States

Authors: John Bostanci, Jonas Haferkamp, Dominik Hangleiter, and Alexander Poremba

Published in: LIPIcs, Volume 350, 20th Conference on the Theory of Quantum Computation, Communication and Cryptography (TQC 2025)


Abstract
Quantum pseudorandomness has found applications in many areas of quantum information, ranging from entanglement theory, to models of scrambling phenomena in chaotic quantum systems, and, more recently, in the foundations of quantum cryptography. Kretschmer (TQC '21) showed that both pseudorandom states and pseudorandom unitaries exist even in a world without classical one-way functions. To this day, however, all known constructions require classical cryptographic building blocks which are themselves synonymous with the existence of one-way functions, and which are also challenging to implement on realistic quantum hardware. In this work, we seek to make progress on both of these fronts simultaneously - by decoupling quantum pseudorandomness from classical cryptography altogether. We introduce a quantum hardness assumption called the Hamiltonian Phase State (HPS) problem, which is the task of decoding output states of a random instantaneous quantum polynomial-time (IQP) circuit. Hamiltonian phase states can be generated very efficiently using only Hadamard gates, single-qubit Z rotations and CNOT circuits. We show that the hardness of our problem reduces to a worst-case version of the problem, and we provide evidence that our assumption is plausibly fully quantum; meaning, it cannot be used to construct one-way functions. We also show information-theoretic hardness when only few copies of HPS are available by proving an approximate t-design property of our ensemble. Finally, we show that our HPS assumption and its variants allow us to efficiently construct many pseudorandom quantum primitives, ranging from pseudorandom states, to quantum pseudoentanglement, to pseudorandom unitaries, and even primitives such as public-key encryption with quantum keys.

Cite as

John Bostanci, Jonas Haferkamp, Dominik Hangleiter, and Alexander Poremba. Efficient Quantum Pseudorandomness from Hamiltonian Phase States. In 20th Conference on the Theory of Quantum Computation, Communication and Cryptography (TQC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 350, pp. 9:1-9:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{bostanci_et_al:LIPIcs.TQC.2025.9,
  author =	{Bostanci, John and Haferkamp, Jonas and Hangleiter, Dominik and Poremba, Alexander},
  title =	{{Efficient Quantum Pseudorandomness from Hamiltonian Phase States}},
  booktitle =	{20th Conference on the Theory of Quantum Computation, Communication and Cryptography (TQC 2025)},
  pages =	{9:1--9:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-392-8},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{350},
  editor =	{Fefferman, Bill},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.TQC.2025.9},
  URN =		{urn:nbn:de:0030-drops-240586},
  doi =		{10.4230/LIPIcs.TQC.2025.9},
  annote =	{Keywords: Quantum pseudorandomness, quantum phase states, quantum cryptography}
}
Document
Automatic Goal Clone Detection in Rocq

Authors: Ali Ghanbari

Published in: LIPIcs, Volume 333, 39th European Conference on Object-Oriented Programming (ECOOP 2025)


Abstract
Proof engineering in Rocq is a labor-intensive process, and as proof developments grow in size, redundancy and maintainability become challenges. One such redundancy is goal cloning, i.e., proving α-equivalent goals multiple times, leading to wasted effort and bloated proof scripts. In this paper, we introduce clone-finder, a novel technique for detecting goal clones in Rocq proofs. By leveraging the formal notion of α-equivalence for Gallina terms, clone-finder systematically identifies duplicated proof goals across large Rocq codebases. We evaluate clone-finder on 40 real-world Rocq projects from the CoqGym dataset. Our results reveal that each project contains an average of 27.73 instances of goal clone. We observed that the clones can be categorized as either exact goal duplication, generalization, or α-equivalent goals with different proofs, each signifying varying levels duplicate effort. Our findings highlight significant untapped potential for proof reuse in Rocq-based formal verification projects, paving the way for future improvements in automated proof engineering.

Cite as

Ali Ghanbari. Automatic Goal Clone Detection in Rocq. In 39th European Conference on Object-Oriented Programming (ECOOP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 333, pp. 12:1-12:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{ghanbari:LIPIcs.ECOOP.2025.12,
  author =	{Ghanbari, Ali},
  title =	{{Automatic Goal Clone Detection in Rocq}},
  booktitle =	{39th European Conference on Object-Oriented Programming (ECOOP 2025)},
  pages =	{12:1--12:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-373-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{333},
  editor =	{Aldrich, Jonathan and Silva, Alexandra},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ECOOP.2025.12},
  URN =		{urn:nbn:de:0030-drops-233055},
  doi =		{10.4230/LIPIcs.ECOOP.2025.12},
  annote =	{Keywords: Clone Detection, Goal, Proof, Rocq, Gallina}
}
Document
Position
Knowledge Graphs for the Life Sciences: Recent Developments, Challenges and Opportunities

Authors: Jiaoyan Chen, Hang Dong, Janna Hastings, Ernesto Jiménez-Ruiz, Vanessa López, Pierre Monnin, Catia Pesquita, Petr Škoda, and Valentina Tamma

Published in: TGDK, Volume 1, Issue 1 (2023): Special Issue on Trends in Graph Data and Knowledge. Transactions on Graph Data and Knowledge, Volume 1, Issue 1


Abstract
The term life sciences refers to the disciplines that study living organisms and life processes, and include chemistry, biology, medicine, and a range of other related disciplines. Research efforts in life sciences are heavily data-driven, as they produce and consume vast amounts of scientific data, much of which is intrinsically relational and graph-structured. The volume of data and the complexity of scientific concepts and relations referred to therein promote the application of advanced knowledge-driven technologies for managing and interpreting data, with the ultimate aim to advance scientific discovery. In this survey and position paper, we discuss recent developments and advances in the use of graph-based technologies in life sciences and set out a vision for how these technologies will impact these fields into the future. We focus on three broad topics: the construction and management of Knowledge Graphs (KGs), the use of KGs and associated technologies in the discovery of new knowledge, and the use of KGs in artificial intelligence applications to support explanations (explainable AI). We select a few exemplary use cases for each topic, discuss the challenges and open research questions within these topics, and conclude with a perspective and outlook that summarizes the overarching challenges and their potential solutions as a guide for future research.

Cite as

Jiaoyan Chen, Hang Dong, Janna Hastings, Ernesto Jiménez-Ruiz, Vanessa López, Pierre Monnin, Catia Pesquita, Petr Škoda, and Valentina Tamma. Knowledge Graphs for the Life Sciences: Recent Developments, Challenges and Opportunities. In Special Issue on Trends in Graph Data and Knowledge. Transactions on Graph Data and Knowledge (TGDK), Volume 1, Issue 1, pp. 5:1-5:33, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)


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@Article{chen_et_al:TGDK.1.1.5,
  author =	{Chen, Jiaoyan and Dong, Hang and Hastings, Janna and Jim\'{e}nez-Ruiz, Ernesto and L\'{o}pez, Vanessa and Monnin, Pierre and Pesquita, Catia and \v{S}koda, Petr and Tamma, Valentina},
  title =	{{Knowledge Graphs for the Life Sciences: Recent Developments, Challenges and Opportunities}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{5:1--5:33},
  year =	{2023},
  volume =	{1},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.1.1.5},
  URN =		{urn:nbn:de:0030-drops-194791},
  doi =		{10.4230/TGDK.1.1.5},
  annote =	{Keywords: Knowledge graphs, Life science, Knowledge discovery, Explainable AI}
}
Document
Machine Learning for Science: Bridging Data-Driven and Mechanistic Modelling (Dagstuhl Seminar 22382)

Authors: Philipp Berens, Kyle Cranmer, Neil D. Lawrence, Ulrike von Luxburg, and Jessica Montgomery

Published in: Dagstuhl Reports, Volume 12, Issue 9 (2023)


Abstract
This report documents the programme and the outcomes of Dagstuhl Seminar 22382 "Machine Learning for Science: Bridging Data-Driven and Mechanistic Modelling". Today’s scientific challenges are characterised by complexity. Interconnected natural, technological, and human systems are influenced by forces acting across time- and spatial-scales, resulting in complex interactions and emergent behaviours. Understanding these phenomena - and leveraging scientific advances to deliver innovative solutions to improve society’s health, wealth, and well-being - requires new ways of analysing complex systems. The transformative potential of AI stems from its widespread applicability across disciplines, and will only be achieved through integration across research domains. AI for science is a rendezvous point. It brings together expertise from AI and application domains; combines modelling knowledge with engineering know-how; and relies on collaboration across disciplines and between humans and machines. Alongside technical advances, the next wave of progress in the field will come from building a community of machine learning researchers, domain experts, citizen scientists, and engineers working together to design and deploy effective AI tools. This report summarises the discussions from the seminar and provides a roadmap to suggest how different communities can collaborate to deliver a new wave of progress in AI and its application for scientific discovery.

Cite as

Philipp Berens, Kyle Cranmer, Neil D. Lawrence, Ulrike von Luxburg, and Jessica Montgomery. Machine Learning for Science: Bridging Data-Driven and Mechanistic Modelling (Dagstuhl Seminar 22382). In Dagstuhl Reports, Volume 12, Issue 9, pp. 150-199, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)


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@Article{berens_et_al:DagRep.12.9.150,
  author =	{Berens, Philipp and Cranmer, Kyle and Lawrence, Neil D. and von Luxburg, Ulrike and Montgomery, Jessica},
  title =	{{Machine Learning for Science: Bridging Data-Driven and Mechanistic Modelling (Dagstuhl Seminar 22382)}},
  pages =	{150--199},
  journal =	{Dagstuhl Reports},
  ISSN =	{2192-5283},
  year =	{2023},
  volume =	{12},
  number =	{9},
  editor =	{Berens, Philipp and Cranmer, Kyle and Lawrence, Neil D. and von Luxburg, Ulrike and Montgomery, Jessica},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DagRep.12.9.150},
  URN =		{urn:nbn:de:0030-drops-178125},
  doi =		{10.4230/DagRep.12.9.150},
  annote =	{Keywords: machine learning, artificial intelligence, life sciences, physical sciences, environmental sciences, simulation, causality, modelling}
}
Document
Auction Algorithms for Market Equilibrium with Weak Gross Substitute Demands and Their Applications

Authors: Jugal Garg, Edin Husić, and László A. Végh

Published in: LIPIcs, Volume 187, 38th International Symposium on Theoretical Aspects of Computer Science (STACS 2021)


Abstract
We consider the Arrow-Debreu exchange market model where agents' demands satisfy the weak gross substitutes (WGS) property. This is a well-studied property, in particular, it gives a sufficient condition for the convergence of the classical tâtonnement dynamics. In this paper, we present a simple auction algorithm that obtains an approximate market equilibrium for WGS demands. Such auction algorithms have been previously known for restricted classes of WGS demands only. As an application of our technique, we obtain an efficient algorithm to find an approximate spending-restricted market equilibrium for WGS demands, a model that has been recently introduced as a continuous relaxation of the Nash social welfare (NSW) problem. This leads to a polynomial-time constant factor approximation algorithm for NSW with budget separable piecewise linear utility functions; only a pseudopolynomial approximation algorithm was known for this setting previously.

Cite as

Jugal Garg, Edin Husić, and László A. Végh. Auction Algorithms for Market Equilibrium with Weak Gross Substitute Demands and Their Applications. In 38th International Symposium on Theoretical Aspects of Computer Science (STACS 2021). Leibniz International Proceedings in Informatics (LIPIcs), Volume 187, pp. 33:1-33:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2021)


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@InProceedings{garg_et_al:LIPIcs.STACS.2021.33,
  author =	{Garg, Jugal and Husi\'{c}, Edin and V\'{e}gh, L\'{a}szl\'{o} A.},
  title =	{{Auction Algorithms for Market Equilibrium with Weak Gross Substitute Demands and Their Applications}},
  booktitle =	{38th International Symposium on Theoretical Aspects of Computer Science (STACS 2021)},
  pages =	{33:1--33:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-180-1},
  ISSN =	{1868-8969},
  year =	{2021},
  volume =	{187},
  editor =	{Bl\"{a}ser, Markus and Monmege, Benjamin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2021.33},
  URN =		{urn:nbn:de:0030-drops-136786},
  doi =		{10.4230/LIPIcs.STACS.2021.33},
  annote =	{Keywords: auction algorithm, weak gross substitutes, Fisher equilibrium, Gale equilibrium, Nash social welfare}
}
Document
07171 Abstracts Collection – Visual Computing – Convergence of Computer Graphics and Computer Vision

Authors: Markus Gross, Heinrich Müller, Hans-Peter Seidel, and Harry Shum

Published in: Dagstuhl Seminar Proceedings, Volume 7171, Visual Computing - Convergence of Computer Graphics and Computer Vision (2008)


Abstract
From 22.04. to 27.04.2007, the Dagstuhl Seminar 07171 ``Visual Computing - Convergence of Computer Graphics and Computer Vision'' was held in the International Conference and Research Center (IBFI), Schloss Dagstuhl. During the seminar, several participants presented their current research, and ongoing work and open problems were discussed. Abstracts of the presentations given during the seminar as well as abstracts of seminar results and ideas are put together in this paper. The first section describes the seminar topics and goals in general. Links to extended abstracts or full papers are provided, if available.

Cite as

Markus Gross, Heinrich Müller, Hans-Peter Seidel, and Harry Shum. 07171 Abstracts Collection – Visual Computing – Convergence of Computer Graphics and Computer Vision. In Visual Computing - Convergence of Computer Graphics and Computer Vision. Dagstuhl Seminar Proceedings, Volume 7171, pp. 1-18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2008)


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@InProceedings{gross_et_al:DagSemProc.07171.1,
  author =	{Gross, Markus and M\"{u}ller, Heinrich and Seidel, Hans-Peter and Shum, Harry},
  title =	{{07171 Abstracts Collection – Visual Computing – Convergence of Computer Graphics and Computer Vision}},
  booktitle =	{Visual Computing - Convergence of Computer Graphics and Computer Vision},
  pages =	{1--18},
  series =	{Dagstuhl Seminar Proceedings (DagSemProc)},
  ISSN =	{1862-4405},
  year =	{2008},
  volume =	{7171},
  editor =	{Markus Gross and Heinrich M\"{u}ller and Hans-Peter Seidel and Harry Shum},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DagSemProc.07171.1},
  URN =		{urn:nbn:de:0030-drops-15044},
  doi =		{10.4230/DagSemProc.07171.1},
  annote =	{Keywords: Image- and video-based modeling and rendering, perception-guided modeling and rendering, texture synthesis, scattering and reflectance measurement rendering, capturing reality (appearance, motion) from images, 3D acquisition and display, 3D reconstruction, image and model compression, computation}
}
Document
07171 Summary – Visual Computing – Convergence of Computer Graphics and Computer Vision

Authors: Markus Gross, Heinrich Müller, Hans-Peter Seidel, and Harry Shum

Published in: Dagstuhl Seminar Proceedings, Volume 7171, Visual Computing - Convergence of Computer Graphics and Computer Vision (2008)


Abstract
Due to the importance of visual information for humans, visual computing is at the very core of the technologies enabling the modern information society. New and emerging technologies such as multimedia, digital television, telecommunication and telepresence, or virtual reality further indicate the tremendous potential of visual interaction with computers in the years to come. Typical for the field is the coincidence of very large data sets with the demand for fast, if possible interactive, user-adapted high quality visual display of the results. Furthermore, the user should be able to interact with the environment in a natural and intuitive way. In order to address the challenges mentioned above, a new and more integrated scientific view of Visual Computing is required that unifies the previously separate ''visual'' disciplines of computer graphics and computer vision. Computer graphics is traditionally concerned with generating visual interfaces of computers and applications to the user. Computer vision focuses on enabling computers to understand and interpret visual information from static images and video sequences.

Cite as

Markus Gross, Heinrich Müller, Hans-Peter Seidel, and Harry Shum. 07171 Summary – Visual Computing – Convergence of Computer Graphics and Computer Vision. In Visual Computing - Convergence of Computer Graphics and Computer Vision. Dagstuhl Seminar Proceedings, Volume 7171, pp. 1-4, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2008)


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@InProceedings{gross_et_al:DagSemProc.07171.2,
  author =	{Gross, Markus and M\"{u}ller, Heinrich and Seidel, Hans-Peter and Shum, Harry},
  title =	{{07171 Summary – Visual Computing – Convergence of Computer Graphics and Computer Vision}},
  booktitle =	{Visual Computing - Convergence of Computer Graphics and Computer Vision},
  pages =	{1--4},
  series =	{Dagstuhl Seminar Proceedings (DagSemProc)},
  ISSN =	{1862-4405},
  year =	{2008},
  volume =	{7171},
  editor =	{Markus Gross and Heinrich M\"{u}ller and Hans-Peter Seidel and Harry Shum},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DagSemProc.07171.2},
  URN =		{urn:nbn:de:0030-drops-15032},
  doi =		{10.4230/DagSemProc.07171.2},
  annote =	{Keywords: Image- and video-based modeling and rendering, perception-guided modeling and rendering, texture synthesis, scattering and reflectance measurement rendering, capturing reality (appearance, motion) from images, 3D acquisition and display, 3D reconstruction, image and model compression, computation}
}
Document
Image-Based Motion Compensation for Structured Light Scanning of Dynamic Surfaces

Authors: Stefan Gumhold and Sören König

Published in: Dagstuhl Seminar Proceedings, Volume 7171, Visual Computing - Convergence of Computer Graphics and Computer Vision (2008)


Abstract
Structured light scanning systems based on temporal pattern codification produce dense and robust results on static scenes but behave very poorly when applied to dynamic scenes in which objects are allowed to move or to deform during the acquisition process. The main reason for this lies in the wrong combination of encoded correspondence information because the same point in the projector pattern sequence can map to different points within the camera images due to depth changes over time. We present a novel approach suitable for measuring and compensating such kind of pattern motion. The described technique can be combined with existing active range scanning systems designed for static surface reconstruction making them applicable for the dynamic case. We demonstrate the benefits of our method by integrating it into a gray code based structured light scanner, which runs at thirty 3d scans per second.

Cite as

Stefan Gumhold and Sören König. Image-Based Motion Compensation for Structured Light Scanning of Dynamic Surfaces. In Visual Computing - Convergence of Computer Graphics and Computer Vision. Dagstuhl Seminar Proceedings, Volume 7171, pp. 1-4, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2008)


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@InProceedings{gumhold_et_al:DagSemProc.07171.3,
  author =	{Gumhold, Stefan and K\"{o}nig, S\"{o}ren},
  title =	{{Image-Based Motion Compensation for Structured Light Scanning of Dynamic Surfaces}},
  booktitle =	{Visual Computing - Convergence of Computer Graphics and Computer Vision},
  pages =	{1--4},
  series =	{Dagstuhl Seminar Proceedings (DagSemProc)},
  ISSN =	{1862-4405},
  year =	{2008},
  volume =	{7171},
  editor =	{Markus Gross and Heinrich M\"{u}ller and Hans-Peter Seidel and Harry Shum},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DagSemProc.07171.3},
  URN =		{urn:nbn:de:0030-drops-15022},
  doi =		{10.4230/DagSemProc.07171.3},
  annote =	{Keywords: 3d scanning, motion compensation, optical flow, structured light, dynamic surfaces}
}
Document
Hierarchical Methods in Computer Graphics (Dagstuhl Seminar 03271)

Authors: Markus Gross, Dinesh Manocha, Heinrich Müller, and Hans-Peter Seidel

Published in: Dagstuhl Seminar Reports. Dagstuhl Seminar Reports, Volume 1 (2021)


Abstract

Cite as

Markus Gross, Dinesh Manocha, Heinrich Müller, and Hans-Peter Seidel. Hierarchical Methods in Computer Graphics (Dagstuhl Seminar 03271). Dagstuhl Seminar Report 384, pp. 1-6, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2003)


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@TechReport{gross_et_al:DagSemRep.384,
  author =	{Gross, Markus and Manocha, Dinesh and M\"{u}ller, Heinrich and Seidel, Hans-Peter},
  title =	{{Hierarchical Methods in Computer Graphics (Dagstuhl Seminar 03271)}},
  pages =	{1--6},
  ISSN =	{1619-0203},
  year =	{2003},
  type = 	{Dagstuhl Seminar Report},
  number =	{384},
  institution =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DagSemRep.384},
  URN =		{urn:nbn:de:0030-drops-152644},
  doi =		{10.4230/DagSemRep.384},
}
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