7 Search Results for "Silver, Lucas"


Document
Poster Abstract
Using Reinforcement Learning to Optimize the Global and Local Crossing Number (Poster Abstract)

Authors: Timo Brand, Henry Förster, Stephen Kobourov, Robin Schukrafft, Markus Wallinger, and Johannes Zink

Published in: LIPIcs, Volume 357, 33rd International Symposium on Graph Drawing and Network Visualization (GD 2025)


Abstract
We present a novel approach to graph drawing based on reinforcement learning for minimizing the global and the local crossing number, that is, the total number of edge crossings and the maximum number of crossings on any edge, respectively. An agent learns how to move a vertex based on a given observation vector. The agent receives feedback in the form of local reward signals tied to crossing reduction. To generate an initial layout, we use a stress-based graph-drawing algorithm. We compare our method against force- and stress-based baseline algorithms as well as three established algorithms for global crossing minimization on a suite of benchmark graphs. The experiments show mixed results: our current algorithm is mainly competitive for the local crossing number.

Cite as

Timo Brand, Henry Förster, Stephen Kobourov, Robin Schukrafft, Markus Wallinger, and Johannes Zink. Using Reinforcement Learning to Optimize the Global and Local Crossing Number (Poster Abstract). In 33rd International Symposium on Graph Drawing and Network Visualization (GD 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 357, pp. 56:1-56:4, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{brand_et_al:LIPIcs.GD.2025.56,
  author =	{Brand, Timo and F\"{o}rster, Henry and Kobourov, Stephen and Schukrafft, Robin and Wallinger, Markus and Zink, Johannes},
  title =	{{Using Reinforcement Learning to Optimize the Global and Local Crossing Number}},
  booktitle =	{33rd International Symposium on Graph Drawing and Network Visualization (GD 2025)},
  pages =	{56:1--56:4},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-403-1},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{357},
  editor =	{Dujmovi\'{c}, Vida and Montecchiani, Fabrizio},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.GD.2025.56},
  URN =		{urn:nbn:de:0030-drops-250420},
  doi =		{10.4230/LIPIcs.GD.2025.56},
  annote =	{Keywords: Reinforcement Learning, Crossing Minimization, Local Crossing Number}
}
Document
Differentiable Programming of Indexed Chemical Reaction Networks and Reaction-Diffusion Systems

Authors: Inhoo Lee, Salvador Buse, and Erik Winfree

Published in: LIPIcs, Volume 347, 31st International Conference on DNA Computing and Molecular Programming (DNA 31) (2025)


Abstract
Many molecular systems are best understood in terms of prototypical species and reactions. The central dogma and related biochemistry are rife with examples: gene i is transcribed into RNA i, which is translated into protein i; kinase n phosphorylates substrate m; protein p dimerizes with protein q. Engineered nucleic acid systems also often have this form: oligonucleotide i hybridizes to complementary oligonucleotide j; signal strand n displaces the output of seesaw gate m; hairpin p triggers the opening of target q. When there are many variants of a small number of prototypes, it can be conceptually cleaner and computationally more efficient to represent the full system in terms of indexed species (e.g. for dimerization, M_p, D_pq) and indexed reactions (M_p + M_q → D_pq). Here, we formalize the Indexed Chemical Reaction Network (ICRN) model and describe a Python software package designed to simulate such systems in the well-mixed and reaction-diffusion settings, using a differentiable programming framework originally developed for large-scale neural network models, taking advantage of GPU acceleration when available. Notably, this framework makes it straightforward to train the models’ initial conditions and rate constants to optimize a target behavior, such as matching experimental data, performing a computation, or exhibiting spatial pattern formation. The natural map of indexed chemical reaction networks onto neural network formalisms provides a tangible yet general perspective for translating concepts and techniques from the theory and practice of neural computation into the design of biomolecular systems.

Cite as

Inhoo Lee, Salvador Buse, and Erik Winfree. Differentiable Programming of Indexed Chemical Reaction Networks and Reaction-Diffusion Systems. In 31st International Conference on DNA Computing and Molecular Programming (DNA 31). Leibniz International Proceedings in Informatics (LIPIcs), Volume 347, pp. 4:1-4:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{lee_et_al:LIPIcs.DNA.31.4,
  author =	{Lee, Inhoo and Buse, Salvador and Winfree, Erik},
  title =	{{Differentiable Programming of Indexed Chemical Reaction Networks and Reaction-Diffusion Systems}},
  booktitle =	{31st International Conference on DNA Computing and Molecular Programming (DNA 31)},
  pages =	{4:1--4:23},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-399-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{347},
  editor =	{Schaeffer, Josie and Zhang, Fei},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.DNA.31.4},
  URN =		{urn:nbn:de:0030-drops-238534},
  doi =		{10.4230/LIPIcs.DNA.31.4},
  annote =	{Keywords: Differentiable Programming, Chemical Reaction Networks, Reaction-Diffusion Systems}
}
Document
RESCUE: Multi-Robot Planning Under Resource Uncertainty and Objective Criticality

Authors: Franco Cordeiro, Samuel Tardieu, and Laurent Pautet

Published in: LIPIcs, Volume 335, 37th Euromicro Conference on Real-Time Systems (ECRTS 2025)


Abstract
Robot planning in distributed systems, such as drone fleets performing active perception missions, presents complex challenges. These missions require cooperation to achieve objectives like collecting sensor data or capturing images. Multi-robot systems offer significant advantages, including faster execution and increased robustness, as robots can compensate for individual failures. However, resource costs, affected by environmental factors such as wind or terrain, are highly uncertain, impacting battery consumption and overall performance. Mission objectives are often prioritized by criticality, such as retrieving data from low-battery sensors to prevent data loss. Addressing these priorities requires sophisticated scheduling to navigate high-dimensional state-action spaces. While heuristics are useful for approximating solutions, few approaches extend to multi-robot systems or adequately address cost uncertainty and criticality, particularly during replanning. The Mixed-Criticality (MC) paradigm, extensively studied in real-time scheduling, provides a framework for handling cost uncertainty by ensuring the completion of high-critical tasks. Despite its potential, the application of MC in distributed systems remains limited. To address the decision-making challenges faced by distributed robots operating under cost uncertainty and objective criticality, we propose four contributions: a comprehensive model integrating criticality, uncertainty, and robustness; distributed synchronization and replanning mechanisms; the incorporation of mixed-criticality principles into multi-robot systems; and enhanced resilience against robot failures. We evaluated our solution, named RESCUE, in a simulated scenario and show how it increases the robustness by reducing the oversizing of the system and completing up to 40% more objectives. We found an increase in resilience of the multi-robot system as our solution not only guaranteed the safe return of every non-faulty robot, but also reduced the effects of a faulty robot by up to 14%. We also computed the performance gain compared to using MCTS in a single robot of up to 2.31 for 5 robots.

Cite as

Franco Cordeiro, Samuel Tardieu, and Laurent Pautet. RESCUE: Multi-Robot Planning Under Resource Uncertainty and Objective Criticality. In 37th Euromicro Conference on Real-Time Systems (ECRTS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 335, pp. 5:1-5:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{cordeiro_et_al:LIPIcs.ECRTS.2025.5,
  author =	{Cordeiro, Franco and Tardieu, Samuel and Pautet, Laurent},
  title =	{{RESCUE: Multi-Robot Planning Under Resource Uncertainty and Objective Criticality}},
  booktitle =	{37th Euromicro Conference on Real-Time Systems (ECRTS 2025)},
  pages =	{5:1--5:23},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-377-5},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{335},
  editor =	{Mancuso, Renato},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ECRTS.2025.5},
  URN =		{urn:nbn:de:0030-drops-235835},
  doi =		{10.4230/LIPIcs.ECRTS.2025.5},
  annote =	{Keywords: Multi-Robot Systems, Embedded Systems, Safety/Mixed-Critical Systems, Real-Time Systems, Monte-Carlo Tree Search}
}
Document
Semantics for Noninterference with Interaction Trees

Authors: Lucas Silver, Paul He, Ethan Cecchetti, Andrew K. Hirsch, and Steve Zdancewic

Published in: LIPIcs, Volume 263, 37th European Conference on Object-Oriented Programming (ECOOP 2023)


Abstract
Noninterference is the strong information-security property that a program does not leak secrets through publicly-visible behavior. In the presence of effects such as nontermination, state, and exceptions, reasoning about noninterference quickly becomes subtle. We advocate using interaction trees (ITrees) to provide compositional mechanized proofs of noninterference for multi-language, effectful, nonterminating programs, while retaining executability of the semantics. We develop important foundations for security analysis with ITrees: two indistinguishability relations, leading to two standard notions of noninterference with adversaries of different strength, along with metatheory libraries for reasoning about each. We demonstrate the utility of our results using a simple imperative language with embedded assembly, along with a compiler into that assembly language.

Cite as

Lucas Silver, Paul He, Ethan Cecchetti, Andrew K. Hirsch, and Steve Zdancewic. Semantics for Noninterference with Interaction Trees. In 37th European Conference on Object-Oriented Programming (ECOOP 2023). Leibniz International Proceedings in Informatics (LIPIcs), Volume 263, pp. 29:1-29:29, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)


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@InProceedings{silver_et_al:LIPIcs.ECOOP.2023.29,
  author =	{Silver, Lucas and He, Paul and Cecchetti, Ethan and Hirsch, Andrew K. and Zdancewic, Steve},
  title =	{{Semantics for Noninterference with Interaction Trees}},
  booktitle =	{37th European Conference on Object-Oriented Programming (ECOOP 2023)},
  pages =	{29:1--29:29},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-281-5},
  ISSN =	{1868-8969},
  year =	{2023},
  volume =	{263},
  editor =	{Ali, Karim and Salvaneschi, Guido},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ECOOP.2023.29},
  URN =		{urn:nbn:de:0030-drops-182227},
  doi =		{10.4230/LIPIcs.ECOOP.2023.29},
  annote =	{Keywords: verification, information-flow, denotational semantics, monads}
}
Document
Interaction Tree Specifications: A Framework for Specifying Recursive, Effectful Computations That Supports Auto-Active Verification

Authors: Lucas Silver, Eddy Westbrook, Matthew Yacavone, and Ryan Scott

Published in: LIPIcs, Volume 263, 37th European Conference on Object-Oriented Programming (ECOOP 2023)


Abstract
This paper presents a specification framework for monadic, recursive, interactive programs that supports auto-active verification, an approach that combines user-provided guidance with automatic verification techniques. This verification tool is designed to have the flexibility of a manual approach to verification along with the usability benefits of automatic approaches. We accomplish this by augmenting Interaction Trees, a Coq datastructure for representing effectful computations, with logical quantifier events. We show that this yields a language of specifications that are easy to understand, automatable, and are powerful enough to handle properties that involve non-termination. Our framework is implemented as a library in Coq. We demonstrate the effectiveness of this framework by verifying real, low-level code.

Cite as

Lucas Silver, Eddy Westbrook, Matthew Yacavone, and Ryan Scott. Interaction Tree Specifications: A Framework for Specifying Recursive, Effectful Computations That Supports Auto-Active Verification. In 37th European Conference on Object-Oriented Programming (ECOOP 2023). Leibniz International Proceedings in Informatics (LIPIcs), Volume 263, pp. 30:1-30:26, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)


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@InProceedings{silver_et_al:LIPIcs.ECOOP.2023.30,
  author =	{Silver, Lucas and Westbrook, Eddy and Yacavone, Matthew and Scott, Ryan},
  title =	{{Interaction Tree Specifications: A Framework for Specifying Recursive, Effectful Computations That Supports Auto-Active Verification}},
  booktitle =	{37th European Conference on Object-Oriented Programming (ECOOP 2023)},
  pages =	{30:1--30:26},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-281-5},
  ISSN =	{1868-8969},
  year =	{2023},
  volume =	{263},
  editor =	{Ali, Karim and Salvaneschi, Guido},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ECOOP.2023.30},
  URN =		{urn:nbn:de:0030-drops-182239},
  doi =		{10.4230/LIPIcs.ECOOP.2023.30},
  annote =	{Keywords: coinduction, specification, verification, monads}
}
Document
Artifact
Semantics for Noninterference with Interaction Trees (Artifact)

Authors: Lucas Silver, Paul He, Ethan Cecchetti, Andrew K. Hirsch, and Steve Zdancewic

Published in: DARTS, Volume 9, Issue 2, Special Issue of the 37th European Conference on Object-Oriented Programming (ECOOP 2023)


Abstract
Noninterference is the strong information-security property that a program does not leak secrets through publicly-visible behavior. In the presence of effects such as nontermination, state, and exceptions, reasoning about noninterference quickly becomes subtle. We advocate using interaction trees (ITrees) to provide compositional mechanized proofs of noninterference for multi-language, effectful, nonterminating programs, while retaining executability of the semantics. We develop important foundations for security analysis with ITrees: two indistinguishability relations, leading to two standard notions of noninterference with adversaries of different strength, along with metatheory libraries for reasoning about each. We demonstrate the utility of our results using a simple imperative language with embedded assembly, along with a compiler into that assembly language.

Cite as

Lucas Silver, Paul He, Ethan Cecchetti, Andrew K. Hirsch, and Steve Zdancewic. Semantics for Noninterference with Interaction Trees (Artifact). In Special Issue of the 37th European Conference on Object-Oriented Programming (ECOOP 2023). Dagstuhl Artifacts Series (DARTS), Volume 9, Issue 2, pp. 6:1-6:2, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)


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@Article{silver_et_al:DARTS.9.2.6,
  author =	{Silver, Lucas and He, Paul and Cecchetti, Ethan and Hirsch, Andrew K. and Zdancewic, Steve},
  title =	{{Semantics for Noninterference with Interaction Trees (Artifact)}},
  pages =	{6:1--6:2},
  journal =	{Dagstuhl Artifacts Series},
  ISSN =	{2509-8195},
  year =	{2023},
  volume =	{9},
  number =	{2},
  editor =	{Silver, Lucas and He, Paul and Cecchetti, Ethan and Hirsch, Andrew K. and Zdancewic, Steve},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DARTS.9.2.6},
  URN =		{urn:nbn:de:0030-drops-182465},
  doi =		{10.4230/DARTS.9.2.6},
  annote =	{Keywords: verification, information-flow, denotational semantics, monads}
}
Document
Artifact
Interaction Tree Specifications: A Framework for Specifying Recursive, Effectful Computations That Supports Auto-Active Verification (Artifact)

Authors: Lucas Silver, Eddy Westbrook, Matthew Yacavone, and Ryan Scott

Published in: DARTS, Volume 9, Issue 2, Special Issue of the 37th European Conference on Object-Oriented Programming (ECOOP 2023)


Abstract
This paper presents a specification framework for monadic, recursive, interactive programs that supports auto-active verification, an approach that combines user-provided guidance with automatic verification techniques. This verification tool is designed to have the flexibility of a manual approach to verification along with the usability benefits of automatic approaches. We accomplish this by augmenting Interaction Trees, a Coq datastructure for representing effectful computations, with logical quantifier events. We show that this yields a language of specifications that are easy to understand, automatable, and are powerful enough to handle properties that involve non-termination. Our framework is implemented as a library in Coq. We demonstrate the effectiveness of this framework by verifying real, low-level code.

Cite as

Lucas Silver, Eddy Westbrook, Matthew Yacavone, and Ryan Scott. Interaction Tree Specifications: A Framework for Specifying Recursive, Effectful Computations That Supports Auto-Active Verification (Artifact). In Special Issue of the 37th European Conference on Object-Oriented Programming (ECOOP 2023). Dagstuhl Artifacts Series (DARTS), Volume 9, Issue 2, pp. 8:1-8:2, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2023)


Copy BibTex To Clipboard

@Article{silver_et_al:DARTS.9.2.8,
  author =	{Silver, Lucas and Westbrook, Eddy and Yacavone, Matthew and Scott, Ryan},
  title =	{{Interaction Tree Specifications: A Framework for Specifying Recursive, Effectful Computations That Supports Auto-Active Verification (Artifact)}},
  pages =	{8:1--8:2},
  journal =	{Dagstuhl Artifacts Series},
  ISSN =	{2509-8195},
  year =	{2023},
  volume =	{9},
  number =	{2},
  editor =	{Silver, Lucas and Westbrook, Eddy and Yacavone, Matthew and Scott, Ryan},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DARTS.9.2.8},
  URN =		{urn:nbn:de:0030-drops-182485},
  doi =		{10.4230/DARTS.9.2.8},
  annote =	{Keywords: coinduction, specification, verification, monads}
}
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