9 Search Results for "Rosenthal, Paul"

Document
Invited Paper
DOI: 10.4230/LIPIcs.CSL.2026.3
Rational Lawvere Logic (Invited Paper)

Authors: Giorgio Bacci, Radu Mardare, Prakash Panangaden, and Gordon Plotkin

Published in: LIPIcs, Volume 363, 34th EACSL Annual Conference on Computer Science Logic (CSL 2026)

Abstract
We study Rational Lawvere logic (RL). This logic is defined over the extended positive reals with an algebraic structure combining the Lawvere quantale (with the reversed order on the extended reals and a sum as tensor) and a multiplicative quantale (with the usual order on the extended reals and a multiplication as tensor); together they provide a semiring structure. The logic is designed for complex quantitative reasoning, including sequents expressing inequalities between rational functions over the extended positive reals. We give a deduction system and demonstrate its expressiveness by deriving a classical result from probability theory relating the Kantorovich and total variation distances. Our deductive system is complete for finitely axiomatizable theories. The proof of completeness relies on the Krivine-Stengle Positivstellensatz. We additionally provide complexity results for both RL and its affine fragment AL. We consider two decision problems: the satisfiability of a set of sequents and whether a sequent follows from a finite set of sequent. We show that both problems lie in PSPACE for RL, and we give sharper complexity bounds for AL: the first problem is NP-complete, while the second is co-NP-complete.
Cite as

Giorgio Bacci, Radu Mardare, Prakash Panangaden, and Gordon Plotkin. Rational Lawvere Logic (Invited Paper). In 34th EACSL Annual Conference on Computer Science Logic (CSL 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 363, pp. 3:1-3:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

Copy BibTex To Clipboard

@InProceedings{bacci_et_al:LIPIcs.CSL.2026.3,
  author =	{Bacci, Giorgio and Mardare, Radu and Panangaden, Prakash and Plotkin, Gordon},
  title =	{{Rational Lawvere Logic}},
  booktitle =	{34th EACSL Annual Conference on Computer Science Logic (CSL 2026)},
  pages =	{3:1--3:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-411-6},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{363},
  editor =	{Guerrini, Stefano and K\"{o}nig, Barbara},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CSL.2026.3},
  URN =		{urn:nbn:de:0030-drops-254277},
  doi =		{10.4230/LIPIcs.CSL.2026.3},
  annote =	{Keywords: Quantitative reasoning, complete deductive system, Lawvere’s quantale}
}
Document
DOI: 10.4230/LIPIcs.ITCS.2026.61
Random Unitaries in Constant (Quantum) Time

Authors: Ben Foxman, Natalie Parham, Francisca Vasconcelos, and Henry Yuen

Published in: LIPIcs, Volume 362, 17th Innovations in Theoretical Computer Science Conference (ITCS 2026)

Abstract
Random unitaries are a central object of study in quantum information, with applications to quantum computation, quantum many-body physics, and quantum cryptography. Recent work has constructed unitary designs and pseudorandom unitaries (PRUs) using Θ(log log n)-depth unitary circuits with two-qubit gates. In this work, we show that unitary designs and PRUs can be efficiently constructed in several well-studied models of constant-time quantum computation (i.e., the time complexity on the quantum computer is independent of the system size). These models are constant-depth circuits augmented with certain nonlocal operations, such as (a) many-qubit TOFFOLI gates, (b) many-qubit FANOUT gates, or (c) mid-circuit measurements with classical feedforward control. Recent advances in quantum computing hardware suggest experimental feasibility of these models in the near future. Our results demonstrate that unitary designs and PRUs can be constructed in much weaker circuit models than previously thought. Furthermore, our construction of PRUs in constant-depth with many-qubit TOFFOLI gates shows that, under cryptographic assumptions, there is no polynomial-time learning algorithm for the circuit class QAC⁰. Finally, our results suggest a new approach towards proving that PARITY is not computable in QAC⁰, a long-standing question in quantum complexity theory.
Cite as

Ben Foxman, Natalie Parham, Francisca Vasconcelos, and Henry Yuen. Random Unitaries in Constant (Quantum) Time. In 17th Innovations in Theoretical Computer Science Conference (ITCS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 362, pp. 61:1-61:25, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

Copy BibTex To Clipboard

@InProceedings{foxman_et_al:LIPIcs.ITCS.2026.61,
  author =	{Foxman, Ben and Parham, Natalie and Vasconcelos, Francisca and Yuen, Henry},
  title =	{{Random Unitaries in Constant (Quantum) Time}},
  booktitle =	{17th Innovations in Theoretical Computer Science Conference (ITCS 2026)},
  pages =	{61:1--61:25},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-410-9},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{362},
  editor =	{Saraf, Shubhangi},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2026.61},
  URN =		{urn:nbn:de:0030-drops-253481},
  doi =		{10.4230/LIPIcs.ITCS.2026.61},
  annote =	{Keywords: Quantum Information, Pseudorandomness, Circuit Complexity}
}
Document
DOI: 10.4230/LIPIcs.WABI.2025.11
Mutational Signature Refitting on Sparse Pan-Cancer Data

Authors: Gal Gilad, Teresa M. Przytycka, and Roded Sharan

Published in: LIPIcs, Volume 344, 25th International Conference on Algorithms for Bioinformatics (WABI 2025)

Abstract
Mutational processes shape cancer genomes, leaving characteristic marks that are termed signatures. The level of activity of each such process, or its signature exposure, provides important information on the disease, improving patient stratification and the prediction of drug response. Thus, there is growing interest in developing refitting methods that decipher those exposures. Previous work in this domain was unsupervised in nature, employing algebraic decomposition and probabilistic inference methods. Here we provide a supervised approach to the problem of signature refitting and show its superiority over current methods. Our method, SuRe, leverages a neural network model to capture correlations between signature exposures in real data. We show that SuRe outperforms previous methods on sparse mutation data from tumor type specific data sets, as well as pan-cancer data sets, with an increasing advantage as the data become sparser. We further demonstrate its utility in clinical settings.
Cite as

Gal Gilad, Teresa M. Przytycka, and Roded Sharan. Mutational Signature Refitting on Sparse Pan-Cancer Data. In 25th International Conference on Algorithms for Bioinformatics (WABI 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 344, pp. 11:1-11:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{gilad_et_al:LIPIcs.WABI.2025.11,
  author =	{Gilad, Gal and Przytycka, Teresa M. and Sharan, Roded},
  title =	{{Mutational Signature Refitting on Sparse Pan-Cancer Data}},
  booktitle =	{25th International Conference on Algorithms for Bioinformatics (WABI 2025)},
  pages =	{11:1--11:23},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-386-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{344},
  editor =	{Brejov\'{a}, Bro\v{n}a and Patro, Rob},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2025.11},
  URN =		{urn:nbn:de:0030-drops-239374},
  doi =		{10.4230/LIPIcs.WABI.2025.11},
  annote =	{Keywords: mutational signatures, signature refitting, cancer genomics, genomic data analysis, somatic mutations}
}
Document
DOI: 10.4230/LIPIcs.WABI.2025.17
An Efficient Data Structure and Algorithm for Long-Match Query in Run-Length Compressed BWT

Authors: Ahsan Sanaullah, Degui Zhi, and Shaojie Zhang

Published in: LIPIcs, Volume 344, 25th International Conference on Algorithms for Bioinformatics (WABI 2025)

Abstract
String matching problems in bioinformatics are typically for finding exact substring matches between a query and a reference text. Previous formulations often focus on maximum exact matches (MEMs). However, multiple occurrences of substrings of the query in the text that are long enough but not maximal may not be captured by MEMs. Such long matches can be informative, especially when the text is a collection of similar sequences such as genomes. In this paper, we describe a new type of match between a pattern and a text that aren't necessarily maximal in the query, but still contain useful matching information: locally maximal exact matches (LEMs). There are usually a large amount of LEMs, so we only consider those above some length threshold ℒ. These are referred to as long LEMs. The purpose of long LEMs is to capture substring matches between a query and a text that are not necessarily maximal in the pattern but still long enough to be important. Therefore efficient long LEMs finding algorithms are desired for these datasets. However, these datasets are too large to query on traditional string indexes. Fortunately, these datasets are very repetitive. Recently, compressed string indexes that take advantage of the redundancy in the data but retain efficient querying capability have been proposed as a solution. We therefore give an efficient algorithm for computing all the long LEMs of a query and a text in a BWT runs compressed string index. We describe an O(m+occ) expected time algorithm that relies on an O(r) words space string index for outputting all long LEMs of a pattern with respect to a text given the matching statistics of the pattern with respect to the text. Here m is the length of the query, occ is the number of long LEMs outputted, and r is the number of runs in the BWT of the text. The O(r) space string index we describe relies on an adaptation of the move data structure by Nishimoto and Tabei. We are able to support LCP[i] queries in constant time given SA[i]. In other words, we answer PLCP[i] queries in constant time. These PLCP queries enable the efficient long LEM query. Long LEMs may provide useful similarity information between a pattern and a text that MEMs may ignore. This information is particularly useful in pangenome and biobank scale haplotype panel contexts.
Cite as

Ahsan Sanaullah, Degui Zhi, and Shaojie Zhang. An Efficient Data Structure and Algorithm for Long-Match Query in Run-Length Compressed BWT. In 25th International Conference on Algorithms for Bioinformatics (WABI 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 344, pp. 17:1-17:25, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{sanaullah_et_al:LIPIcs.WABI.2025.17,
  author =	{Sanaullah, Ahsan and Zhi, Degui and Zhang, Shaojie},
  title =	{{An Efficient Data Structure and Algorithm for Long-Match Query in Run-Length Compressed BWT}},
  booktitle =	{25th International Conference on Algorithms for Bioinformatics (WABI 2025)},
  pages =	{17:1--17:25},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-386-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{344},
  editor =	{Brejov\'{a}, Bro\v{n}a and Patro, Rob},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2025.17},
  URN =		{urn:nbn:de:0030-drops-239433},
  doi =		{10.4230/LIPIcs.WABI.2025.17},
  annote =	{Keywords: BWT, LEM, Long LEM, MEM, Run Length Compressed BWT, Move Data Structure, Pangenome}
}
Document
DOI: 10.4230/LIPIcs.SoCG.2025.45
Higher Order Bipartiteness vs Bi-Partitioning in Simplicial Complexes

Authors: Marzieh Eidi and Sayan Mukherjee

Published in: LIPIcs, Volume 332, 41st International Symposium on Computational Geometry (SoCG 2025)

Abstract
Bipartite graphs are a fundamental concept in graph theory with diverse applications. A graph is bipartite iff it contains no odd cycles, a characteristic that has many implications in diverse fields ranging from matching problems to the construction of complex networks. Another key identifying feature is their Laplacian spectrum as bipartite graphs achieve the maximum possible eigenvalue of graph Laplacian. However, for modeling higher-order connections in complex systems, hypergraphs and simplicial complexes are required due to the limitations of graphs in representing pairwise interactions. In this article, using simple tools from graph theory, we extend the cycle-based characterization from bipartite graphs to those simplicial complexes that achieve the maximum Hodge Laplacian eigenvalue, known as disorientable simplicial complexes. We show that a N-dimensional simplicial complex is disorientable if its down dual graph contains no simple odd cycle of distinct edges and no twisted even cycle of distinct edges. Furthermore, we see that in a N-simplicial complex without twisting cycles, the fewer the number of (non-branching) simple odd cycles in its down dual graph, the closer is its maximum eigenvalue to the possible maximum eigenvalue of Hodge Laplacian. Similar to the graph case, the absence of odd cycles plays a crucial role in solving the bi-partitioning problem of simplexes in higher dimensions.
Cite as

Marzieh Eidi and Sayan Mukherjee. Higher Order Bipartiteness vs Bi-Partitioning in Simplicial Complexes. In 41st International Symposium on Computational Geometry (SoCG 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 332, pp. 45:1-45:12, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{eidi_et_al:LIPIcs.SoCG.2025.45,
  author =	{Eidi, Marzieh and Mukherjee, Sayan},
  title =	{{Higher Order Bipartiteness vs Bi-Partitioning in Simplicial Complexes}},
  booktitle =	{41st International Symposium on Computational Geometry (SoCG 2025)},
  pages =	{45:1--45:12},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-370-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{332},
  editor =	{Aichholzer, Oswin and Wang, Haitao},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2025.45},
  URN =		{urn:nbn:de:0030-drops-231972},
  doi =		{10.4230/LIPIcs.SoCG.2025.45},
  annote =	{Keywords: Bipartite graphs, Simplicial complex, Disorientability, Hodge Laplacian, odd cycles, Twisted cycles, down-dual graph}
}
Document
DOI: 10.4230/LIPIcs.ITCS.2025.96
Formulations and Constructions of Remote State Preparation with Verifiability, with Applications

Authors: Jiayu Zhang

Published in: LIPIcs, Volume 325, 16th Innovations in Theoretical Computer Science Conference (ITCS 2025)

Abstract
Remote state preparation with verifiability (RSPV) is an important quantum cryptographic primitive [Alexandru Gheorghiu and Thomas Vidick, 2019; Jiayu Zhang, 2022]. In this primitive, a client would like to prepare a quantum state (sampled or chosen from a state family) on the server side, such that ideally the client knows its full description, while the server holds and only holds the state itself. In this work we make several contributions on its formulations, constructions and applications. In more detail: - We first work on the definitions and abstract properties of the RSPV problem. We select and compare different variants of definitions [Bennett et al., 2001; Alexandru Gheorghiu and Thomas Vidick, 2019; Jiayu Zhang, 2022; Alexandru Gheorghiu et al., 2022], and study their basic properties (like composability and amplification). - We also study a closely related question of how to certify the server’s operations (instead of solely the states). We introduce a new notion named remote operator application with verifiability (ROAV). We compare this notion with related existing definitions [Summers and Werner, 1987; Dominic Mayers and Andrew Chi-Chih Yao, 2004; Zhengfeng Ji et al., 2021; Tony Metger and Thomas Vidick, 2021; Anand Natarajan and Tina Zhang, 2023], study its abstract properties and leave its concrete constructions for further works. - Building on the abstract properties and existing results [Zvika Brakerski et al., 2023], we construct a series of new RSPV protocols. Our constructions not only simplify existing results [Alexandru Gheorghiu and Thomas Vidick, 2019] but also cover new state families, for example, states in the form of 1/√2 (|0⟩ + |x_0⟩ + |1⟩ |x_1⟩). All these constructions rely only on the existence of weak NTCF [Zvika Brakerski et al., 2020; Navid Alamati et al., 2022], without additional requirements like the adaptive hardcore bit property [Zvika Brakerski et al., 2018; Navid Alamati et al., 2022]. - As a further application, we show that the classical verification of quantum computations (CVQC) problem [Dorit Aharonov et al., 2010; Urmila Mahadev, 2018] could be constructed from assumptions on group actions [Navid Alamati et al., 2020]. This is achieved by combining our results on RSPV with group-action-based instantiation of weak NTCF [Navid Alamati et al., 2022], and then with the quantum-gadget-assisted quantum verification protocol [Ferracin et al., 2018].
Cite as

Jiayu Zhang. Formulations and Constructions of Remote State Preparation with Verifiability, with Applications. In 16th Innovations in Theoretical Computer Science Conference (ITCS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 325, pp. 96:1-96:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{zhang:LIPIcs.ITCS.2025.96,
  author =	{Zhang, Jiayu},
  title =	{{Formulations and Constructions of Remote State Preparation with Verifiability, with Applications}},
  booktitle =	{16th Innovations in Theoretical Computer Science Conference (ITCS 2025)},
  pages =	{96:1--96:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-361-4},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{325},
  editor =	{Meka, Raghu},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2025.96},
  URN =		{urn:nbn:de:0030-drops-227245},
  doi =		{10.4230/LIPIcs.ITCS.2025.96},
  annote =	{Keywords: Quantum Cryptography, Remote State Preparation, Self-testing, Verification of Quantum Computations}
}
Document
Resource Paper
DOI: 10.4230/TGDK.2.2.4
FAIR Jupyter: A Knowledge Graph Approach to Semantic Sharing and Granular Exploration of a Computational Notebook Reproducibility Dataset

Authors: Sheeba Samuel and Daniel Mietchen

Published in: TGDK, Volume 2, Issue 2 (2024): Special Issue on Resources for Graph Data and Knowledge. Transactions on Graph Data and Knowledge, Volume 2, Issue 2

Abstract
The way in which data are shared can affect their utility and reusability. Here, we demonstrate how data that we had previously shared in bulk can be mobilized further through a knowledge graph that allows for much more granular exploration and interrogation. The original dataset is about the computational reproducibility of GitHub-hosted Jupyter notebooks associated with biomedical publications. It contains rich metadata about the publications, associated GitHub repositories and Jupyter notebooks, and the notebooks' reproducibility. We took this dataset, converted it into semantic triples and loaded these into a triple store to create a knowledge graph - FAIR Jupyter - that we made accessible via a web service. This enables granular data exploration and analysis through queries that can be tailored to specific use cases. Such queries may provide details about any of the variables from the original dataset, highlight relationships between them or combine some of the graph’s content with materials from corresponding external resources. We provide a collection of example queries addressing a range of use cases in research and education. We also outline how sets of such queries can be used to profile specific content types, either individually or by class. We conclude by discussing how such a semantically enhanced sharing of complex datasets can both enhance their FAIRness - i.e., their findability, accessibility, interoperability, and reusability - and help identify and communicate best practices, particularly with regards to data quality, standardization, automation and reproducibility.
Cite as

Sheeba Samuel and Daniel Mietchen. FAIR Jupyter: A Knowledge Graph Approach to Semantic Sharing and Granular Exploration of a Computational Notebook Reproducibility Dataset. In Special Issue on Resources for Graph Data and Knowledge. Transactions on Graph Data and Knowledge (TGDK), Volume 2, Issue 2, pp. 4:1-4:24, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@Article{samuel_et_al:TGDK.2.2.4,
  author =	{Samuel, Sheeba and Mietchen, Daniel},
  title =	{{FAIR Jupyter: A Knowledge Graph Approach to Semantic Sharing and Granular Exploration of a Computational Notebook Reproducibility Dataset}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{4:1--4:24},
  ISSN =	{2942-7517},
  year =	{2024},
  volume =	{2},
  number =	{2},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.2.2.4},
  URN =		{urn:nbn:de:0030-drops-225886},
  doi =		{10.4230/TGDK.2.2.4},
  annote =	{Keywords: Knowledge Graph, Computational reproducibility, Jupyter notebooks, FAIR data, PubMed Central, GitHub, Python, SPARQL}
}
Document
DOI: 10.4230/LIPIcs.SWAT.2024.33
Sparse Cuts in Hypergraphs from Random Walks on Simplicial Complexes

Authors: Anand Louis, Rameesh Paul, and Arka Ray

Published in: LIPIcs, Volume 294, 19th Scandinavian Symposium and Workshops on Algorithm Theory (SWAT 2024)

Abstract
There are a lot of recent works on generalizing the spectral theory of graphs and graph partitioning to k-uniform hypergraphs. There have been two broad directions toward this goal. One generalizes the notion of graph conductance to hypergraph conductance [Louis, Makarychev - TOC'16; Chan, Louis, Tang, Zhang - JACM'18]. In the second approach, one can view a hypergraph as a simplicial complex and study its various topological properties [Linial, Meshulam - Combinatorica'06; Meshulam, Wallach - RSA'09; Dotterrer, Kaufman, Wagner - SoCG'16; Parzanchevski, Rosenthal - RSA'17] and spectral properties [Kaufman, Mass - ITCS'17; Dinur, Kaufman - FOCS'17; Kaufman, Openheim - STOC'18; Oppenheim - DCG'18; Kaufman, Openheim - Combinatorica'20]. In this work, we attempt to bridge these two directions of study by relating the spectrum of up-down walks and swap walks on the simplicial complex, a downward closed set system, to hypergraph expansion. More precisely, we study the simplicial complex obtained by downward closing the given hypergraph and random walks between its levels X(l), i.e., the sets of cardinality l. In surprising contrast to random walks on graphs, we show that the spectral gap of swap walks and up-down walks between level m and l with 1 < m ⩽ l cannot be used to infer any bounds on hypergraph conductance. Moreover, we show that the spectral gap of swap walks between X(1) and X(k-1) cannot be used to infer any bounds on hypergraph conductance. In contrast, we give a Cheeger-like inequality relating the spectra of walks between level 1 and l for any l ⩽ k to hypergraph expansion. This is a surprising difference between swaps walks and up-down walks! Finally, we also give a construction to show that the well-studied notion of link expansion in simplicial complexes cannot be used to bound hypergraph expansion in a Cheeger-like manner.
Cite as

Anand Louis, Rameesh Paul, and Arka Ray. Sparse Cuts in Hypergraphs from Random Walks on Simplicial Complexes. In 19th Scandinavian Symposium and Workshops on Algorithm Theory (SWAT 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 294, pp. 33:1-33:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{louis_et_al:LIPIcs.SWAT.2024.33,
  author =	{Louis, Anand and Paul, Rameesh and Ray, Arka},
  title =	{{Sparse Cuts in Hypergraphs from Random Walks on Simplicial Complexes}},
  booktitle =	{19th Scandinavian Symposium and Workshops on Algorithm Theory (SWAT 2024)},
  pages =	{33:1--33:15},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-318-8},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{294},
  editor =	{Bodlaender, Hans L.},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SWAT.2024.33},
  URN =		{urn:nbn:de:0030-drops-200739},
  doi =		{10.4230/LIPIcs.SWAT.2024.33},
  annote =	{Keywords: Sparse Cuts, Random Walks, Link Expansion, Hypergraph Expansion, Simplicial Complexes, High Dimensional Expander, Threshold Rank}
}
Document
DOI: 10.4230/DFU.Vol2.SciViz.2011.222
Variational Level-Set Detection of Local Isosurfaces from Unstructured Point-based Volume Data

Authors: Vladimir Molchanov, Paul Rosenthal, and Lars Linsen

Published in: Dagstuhl Follow-Ups, Volume 2, Scientific Visualization: Interactions, Features, Metaphors (2011)

Abstract
A standard approach for visualizing scalar volume data is the extraction of isosurfaces. The most efficient methods for surface extraction operate on regular grids. When data is given on unstructured point-based samples, regularization can be applied but may introduce interpolation errors. We propose a method for smooth isosurface visualization that operates directly on unstructured point-based volume data avoiding any resampling. We derive a variational formulation for smooth local isosurface extraction using an implicit surface representation in form of a level-set approach, deploying Moving Least Squares (MLS) approximation, and operating on a kd-tree. The locality of our approach has two aspects: first, our algorithm extracts only those components of the isosurface, which intersect a subdomain of interest; second, the action of the main term in the governing equation is concentrated near the current isosurface position. Both aspects reduce the computation times per level-set iteration. As for most level-set methods a reinitialization procedure is needed, but we also consider a modified algorithm where this step is eliminated. The final isosurface is extracted in form of a point cloud representation. We present a novel point completion scheme that allows us to handle highly adaptive point sample distributions. Subsequently, splat-based or mere (shaded) point rendering is applied. We apply our method to several synthetic and real-world data sets to demonstrate its validity and efficiency.
Cite as

Vladimir Molchanov, Paul Rosenthal, and Lars Linsen. Variational Level-Set Detection of Local Isosurfaces from Unstructured Point-based Volume Data. In Scientific Visualization: Interactions, Features, Metaphors. Dagstuhl Follow-Ups, Volume 2, pp. 222-239, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2011)

Copy BibTex To Clipboard

@InCollection{molchanov_et_al:DFU.Vol2.SciViz.2011.222,
  author =	{Molchanov, Vladimir and Rosenthal, Paul and Linsen, Lars},
  title =	{{Variational Level-Set Detection of Local Isosurfaces from Unstructured Point-based Volume Data}},
  booktitle =	{Scientific Visualization: Interactions, Features, Metaphors},
  pages =	{222--239},
  series =	{Dagstuhl Follow-Ups},
  ISBN =	{978-3-939897-26-2},
  ISSN =	{1868-8977},
  year =	{2011},
  volume =	{2},
  editor =	{Hagen, Hans},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/DFU.Vol2.SciViz.2011.222},
  URN =		{urn:nbn:de:0030-drops-32941},
  doi =		{10.4230/DFU.Vol2.SciViz.2011.222},
  annote =	{Keywords: Level-set, isosurface extraction, visualization in astrophysics, particle simulations}
}
  • Refine by Type
  • 9 Document/PDF
  • 7 Document/HTML

  • Refine by Publication Year
  • 2 2026
  • 4 2025
  • 2 2024
  • 1 2011

  • Refine by Author
  • 1 Bacci, Giorgio
  • 1 Eidi, Marzieh
  • 1 Foxman, Ben
  • 1 Gilad, Gal
  • 1 Linsen, Lars
  • Show More...

  • Refine by Series/Journal
  • 7 LIPIcs
  • 1 TGDK
  • 1 DFU

  • Refine by Classification
  • 1 Applied computing → Bioinformatics
  • 1 Information systems → Entity relationship models
  • 1 Information systems → Information extraction
  • 1 Mathematics of computing → Combinatorics
  • 1 Theory of computation → Approximation algorithms analysis
  • Show More...

  • Refine by Keyword
  • 1 BWT
  • 1 Bipartite graphs
  • 1 Circuit Complexity
  • 1 Computational reproducibility
  • 1 Disorientability
  • Show More...

Any Issues?
X

Feedback on the Current Page

CAPTCHA

Thanks for your feedback!

Feedback submitted to Dagstuhl Publishing

Could not send message

Please try again later or send an E-mail
© 2023-2026 Schloss Dagstuhl – LZI GmbH Schloss Dagstuhl – LZI GmbH About DROPS Imprint Privacy Contact