28 Search Results for "Fu, Cheng"


Document
Semi-Simplex Phylogenetic Networks: Tree-Child Networks and Galled Trees

Authors: Michael Fuchs and Tsan-Cheng Yu

Published in: LIPIcs, Volume 381, 37th International Conference on Probabilistic, Combinatorial and Asymptotic Methods for the Analysis of Algorithms (AofA 2026)


Abstract
Understanding the size of phylogenetic network classes and the typical shape of a random network from a fixed class has been one of the major research focuses in phylogenetics over the last couple of years. In this extended abstract, we consider two subclasses of the (recently introduced) class of semi-simplex phylogenetic networks, namely, semi-simplex tree-child networks and semi-simplex galled trees. We clarify their sizes relative to the (known) sizes of general tree-child networks and galled trees, respectively, and prove limit laws for parameters of random networks from these classes. Additional classes of semi-simplex networks will be considered in the journal version of this paper.

Cite as

Michael Fuchs and Tsan-Cheng Yu. Semi-Simplex Phylogenetic Networks: Tree-Child Networks and Galled Trees. In 37th International Conference on Probabilistic, Combinatorial and Asymptotic Methods for the Analysis of Algorithms (AofA 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 381, pp. 5:1-5:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{fuchs_et_al:LIPIcs.AofA.2026.5,
  author =	{Fuchs, Michael and Yu, Tsan-Cheng},
  title =	{{Semi-Simplex Phylogenetic Networks: Tree-Child Networks and Galled Trees}},
  booktitle =	{37th International Conference on Probabilistic, Combinatorial and Asymptotic Methods for the Analysis of Algorithms (AofA 2026)},
  pages =	{5:1--5:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-435-2},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{381},
  editor =	{Panagiotou, Konstantinos},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.AofA.2026.5},
  URN =		{urn:nbn:de:0030-drops-262768},
  doi =		{10.4230/LIPIcs.AofA.2026.5},
  annote =	{Keywords: Semi-simplex networks, tree-child networks, galled trees, enumeration, limit laws, Sackin index}
}
Document
Limitations on Accurate, Trusted, Human-Level Reasoning

Authors: Rina Panigrahy and Vatsal Sharan

Published in: LIPIcs, Volume 368, 7th Symposium on Foundations of Responsible Computing (FORC 2026)


Abstract
We identify a fundamental incompatibility between the goals of accuracy, trust, and human-level reasoning in artificial intelligence (AI) systems, for strict mathematical definitions of these notions. We define accuracy of a system as the property that it never makes any false claims when it has the ability to abstain from making a prediction on any input, and trust as the assumption that the system is accurate. We define human-level reasoning as the property of an AI system always matching or exceeding human capability. Our core finding is that - for our formal definitions of these notions - an accurate and trusted AI system cannot be a human-level reasoning system: for such an accurate, trusted system there are task instances which are easily and provably solvable by a human but not by the system. Our proofs draw parallels to Gödel’s incompleteness theorems and Turing’s proof of the undecidability of the halting problem, and can be regarded as interpretations of Gödel’s and Turing’s results. Key to our proof is the formalization of the notion of trust, which allows us to separate the intrinsic property of a system (being accurate) from its epistemic status (being trusted).

Cite as

Rina Panigrahy and Vatsal Sharan. Limitations on Accurate, Trusted, Human-Level Reasoning. In 7th Symposium on Foundations of Responsible Computing (FORC 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 368, pp. 11:1-11:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{panigrahy_et_al:LIPIcs.FORC.2026.11,
  author =	{Panigrahy, Rina and Sharan, Vatsal},
  title =	{{Limitations on Accurate, Trusted, Human-Level Reasoning}},
  booktitle =	{7th Symposium on Foundations of Responsible Computing (FORC 2026)},
  pages =	{11:1--11:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-419-2},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{368},
  editor =	{Lin, Huijia (Rachel)},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.FORC.2026.11},
  URN =		{urn:nbn:de:0030-drops-259840},
  doi =		{10.4230/LIPIcs.FORC.2026.11},
  annote =	{Keywords: Accuracy, Safety, Trust, Complexity-theoretic limitations}
}
Document
Mapping Chemical Space: Topological Data Analysis of Chemical Latent Space with Mapper

Authors: Dhruv Meduri, Chuan-Shen Hu, Cong Shen, Kelin Xia, and Bei Wang

Published in: LIPIcs, Volume 367, 42nd International Symposium on Computational Geometry (SoCG 2026)


Abstract
The vast chemical space, encompassing virtually innumerable molecules and materials, presents both immense opportunities and significant challenges. The design and discovery of novel drugs and functional materials may be viewed as a search within this space; however, the sheer scale of potential candidates renders exhaustive exploration infeasible. To address this, we introduce Chemical Mapper, a framework that integrates topological data analysis with deep learning to enable the visual exploration and analysis of chemical latent spaces. At its core, Chemical Mapper employs mapper, a widely used tool in topological data analysis, to investigate the organizational principles of chemical latent spaces defined by molecular representations learned by geometric deep learning models. In doing so, Chemical Mapper not only highlights groups of molecular representations but also uncovers the relationships among them through linkages and branching structures. Our results show that Chemical Mapper reveals intrinsic patterns associated with molecular scaffolds, functional groups, and chemical properties, as well as the structural and functional evolutions of the molecules.

Cite as

Dhruv Meduri, Chuan-Shen Hu, Cong Shen, Kelin Xia, and Bei Wang. Mapping Chemical Space: Topological Data Analysis of Chemical Latent Space with Mapper. In 42nd International Symposium on Computational Geometry (SoCG 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 367, pp. 78:1-78:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{meduri_et_al:LIPIcs.SoCG.2026.78,
  author =	{Meduri, Dhruv and Hu, Chuan-Shen and Shen, Cong and Xia, Kelin and Wang, Bei},
  title =	{{Mapping Chemical Space: Topological Data Analysis of Chemical Latent Space with Mapper}},
  booktitle =	{42nd International Symposium on Computational Geometry (SoCG 2026)},
  pages =	{78:1--78:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-418-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{367},
  editor =	{Ahn, Hee-Kap and Hoffmann, Michael and Nayyeri, Amir},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2026.78},
  URN =		{urn:nbn:de:0030-drops-258854},
  doi =		{10.4230/LIPIcs.SoCG.2026.78},
  annote =	{Keywords: Practice of computational topology, topological data analysis, applications in chemistry, mapper algorithm, high-dimensional data analysis, chemical spaces, geometric deep learning, latent space geometry}
}
Document
Linking High-Level Synthesis with FPGA Runtime Orchestration

Authors: Despoina Tomkou, Aggelos Ferikoglou, Dimosthenis Masouros, Sotirios Xydis, and Dimitrios Soudris

Published in: OASIcs, Volume 141, 17th Workshop on Parallel Programming and Run-Time Management Techniques for Many-Core Architectures and 15th Workshop on Design Tools and Architectures for Multicore Embedded Computing Platforms (PARMA-DITAM 2026)


Abstract
FPGAs are increasingly being adopted across the edge-to-cloud continuum due to their ability to provide both high performance and energy efficiency. However, the complexity of programming FPGAs often leads to deployed designs that underutilize available resources. FPGA multi-tenancy has been proposed to enhance resource utilization, yet monolithic designs and dynamic workload demands continue to challenge efficient FPGA usage and compliance with Quality of Service requirements. To address these issues, we propose a novel framework for the optimal orchestration of FPGAs across the edge-to-cloud continuum while meeting user demands. The framework generates approximations of Pareto-optimal designs for each application, capturing trade-offs between performance and resource usage with minimal bitstream generation. This information allows the runtime orchestrator to select the most suitable design based on available PR regions and the QoS requirements of each user. Experimental results demonstrate that the proposed approach achieves an average reduction of QoS violations by a factor of 8.1× across diverse workloads and baseline configurations. Overall, the framework offers a practical and effective solution for realizing FPGA-as-a-Service across the edge-to-cloud continuum.

Cite as

Despoina Tomkou, Aggelos Ferikoglou, Dimosthenis Masouros, Sotirios Xydis, and Dimitrios Soudris. Linking High-Level Synthesis with FPGA Runtime Orchestration. In 17th Workshop on Parallel Programming and Run-Time Management Techniques for Many-Core Architectures and 15th Workshop on Design Tools and Architectures for Multicore Embedded Computing Platforms (PARMA-DITAM 2026). Open Access Series in Informatics (OASIcs), Volume 141, pp. 7:1-7:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{tomkou_et_al:OASIcs.PARMA-DITAM.2026.7,
  author =	{Tomkou, Despoina and Ferikoglou, Aggelos and Masouros, Dimosthenis and Xydis, Sotirios and Soudris, Dimitrios},
  title =	{{Linking High-Level Synthesis with FPGA Runtime Orchestration}},
  booktitle =	{17th Workshop on Parallel Programming and Run-Time Management Techniques for Many-Core Architectures and 15th Workshop on Design Tools and Architectures for Multicore Embedded Computing Platforms (PARMA-DITAM 2026)},
  pages =	{7:1--7:14},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-416-1},
  ISSN =	{2190-6807},
  year =	{2026},
  volume =	{141},
  editor =	{Baroffio, Davide and Busia, Paola and Denisov, Lev and Shukla, Nitin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.PARMA-DITAM.2026.7},
  URN =		{urn:nbn:de:0030-drops-256746},
  doi =		{10.4230/OASIcs.PARMA-DITAM.2026.7},
  annote =	{Keywords: FPGA, Orchestration, Partial Reconfiguration, FPGAaaS}
}
Document
Performance Modeling & Mapping of LLM Inference on Heterogeneous Vectorized CGRAs

Authors: Dionysios Kefallinos, Georgios Alexandris, Alexis Maras, Panagiotis Chaidos, Manil Dev Gomony, Henk Corporaal, Dimitrios Soudris, and Sotirios Xydis

Published in: OASIcs, Volume 141, 17th Workshop on Parallel Programming and Run-Time Management Techniques for Many-Core Architectures and 15th Workshop on Design Tools and Architectures for Multicore Embedded Computing Platforms (PARMA-DITAM 2026)


Abstract
Since the emergence of transformer-based models, the computational demands for Large Language Model (LLM) inference have been increasing exponentially, primarily due to their compounding parameter sizes, their structural complexity, and the use of non-linear functions. This tendency leads to the necessity of deploying them on low-power edge devices and DNN accelerators, to fuel next-generation agentic AI systems. Coarse-Grained Reconfigurable Architectures (CGRAs) have proven to be a compelling paradigm for edge acceleration, combining the programmability of general-purpose platforms with the high performance and energy efficiency associated with ASICs. In this work, we introduce an end-to-end performance modeling and mapping framework for LLM inference on heterogeneous CGRAs. Our methodology enables rapid exploration of the micro-architectural design space parameters, i.e., the number of processing elements, vector sizes, and memory configurations, by providing an accurate, explainable, and analytical CGRA performance modeling methodology, with an average cycle error of 0.9%. Architecturally, we build upon R-Blocks, a heterogeneous CGRA platform, and extend it to support floating-point arithmetic operations as well as a full-stack compilation and mapping flow for both full (FP32) and quantized (INT8) Llama2 models. The proposed methodology, evaluated on a 22nm technology node, achieves superior peak performance per Watt compared to related works such as REVAMP and CFEACT (1.8× and 2.8× respectively).

Cite as

Dionysios Kefallinos, Georgios Alexandris, Alexis Maras, Panagiotis Chaidos, Manil Dev Gomony, Henk Corporaal, Dimitrios Soudris, and Sotirios Xydis. Performance Modeling & Mapping of LLM Inference on Heterogeneous Vectorized CGRAs. In 17th Workshop on Parallel Programming and Run-Time Management Techniques for Many-Core Architectures and 15th Workshop on Design Tools and Architectures for Multicore Embedded Computing Platforms (PARMA-DITAM 2026). Open Access Series in Informatics (OASIcs), Volume 141, pp. 8:1-8:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{kefallinos_et_al:OASIcs.PARMA-DITAM.2026.8,
  author =	{Kefallinos, Dionysios and Alexandris, Georgios and Maras, Alexis and Chaidos, Panagiotis and Gomony, Manil Dev and Corporaal, Henk and Soudris, Dimitrios and Xydis, Sotirios},
  title =	{{Performance Modeling \& Mapping of LLM Inference on Heterogeneous Vectorized CGRAs}},
  booktitle =	{17th Workshop on Parallel Programming and Run-Time Management Techniques for Many-Core Architectures and 15th Workshop on Design Tools and Architectures for Multicore Embedded Computing Platforms (PARMA-DITAM 2026)},
  pages =	{8:1--8:14},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-416-1},
  ISSN =	{2190-6807},
  year =	{2026},
  volume =	{141},
  editor =	{Baroffio, Davide and Busia, Paola and Denisov, Lev and Shukla, Nitin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.PARMA-DITAM.2026.8},
  URN =		{urn:nbn:de:0030-drops-256752},
  doi =		{10.4230/OASIcs.PARMA-DITAM.2026.8},
  annote =	{Keywords: Edge AI, LLM, CGRA, Heterogeneous Architectures, Performance Modeling, Hardware Acceleration, Low Power Computing}
}
Document
Survey
Temporal Modelling in Cultural Heritage Knowledge Graphs: Use Cases, Requirements, Evaluation, and Decision Support

Authors: Oleksandra Bruns, Jörg Waitelonis, Jeff Z. Pan, and Harald Sack

Published in: TGDK, Volume 4, Issue 1 (2026). Transactions on Graph Data and Knowledge, Volume 4, Issue 1


Abstract
Our culture, history and world are in constant motion, continuously shaped by the flow of time, evolving narratives, and shifting relationships. Capturing this temporal complexity within cultural heritage (CH) knowledge graphs is essential for preserving the dynamic nature of human heritage. However, standard RDF predicates fail to effectively model the temporal aspects of cultural data, such as changing facts, evolving relationships, and temporal concepts. Over the past two decades, a variety of RDF-based approaches have been proposed to address this limitation, yet guidance is missing on which method best suits specific CH contexts. This paper presents a systematic evaluation of temporal RDF modelling approaches from a CH perspective. Based on an analysis of real-world CH use cases, core temporal requirements are identified that reflect both modelling expressivity and practical concerns. Six prominent approaches - RDF*, tRDF, Named Graphs, Singleton Property, N-ary Relations, and 4D Fluents - are assessed across these requirements. Our findings reveal that no single solution fits all scenarios, but suitable approaches can be selected based on project-specific priorities. To support practitioners, a decision-support tool is introduced to guide them in selecting the most suitable extension for their specific needs. This work provides practical guidance for CH modelling and contributes to the broader development of temporally aware Linked Data.

Cite as

Oleksandra Bruns, Jörg Waitelonis, Jeff Z. Pan, and Harald Sack. Temporal Modelling in Cultural Heritage Knowledge Graphs: Use Cases, Requirements, Evaluation, and Decision Support. In Transactions on Graph Data and Knowledge (TGDK), Volume 4, Issue 1, pp. 2:1-2:46, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@Article{bruns_et_al:TGDK.4.1.2,
  author =	{Bruns, Oleksandra and Waitelonis, J\"{o}rg and Pan, Jeff Z. and Sack, Harald},
  title =	{{Temporal Modelling in Cultural Heritage Knowledge Graphs: Use Cases, Requirements, Evaluation, and Decision Support}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{2:1--2:46},
  ISSN =	{2942-7517},
  year =	{2026},
  volume =	{4},
  number =	{1},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.4.1.2},
  URN =		{urn:nbn:de:0030-drops-256871},
  doi =		{10.4230/TGDK.4.1.2},
  annote =	{Keywords: Temporal Data Representation, RDF Extensions, Cultural Heritage, Knowledge Graphs}
}
Document
TURBO: Utility-Aware Bandwidth Allocation for Cloud-Augmented Autonomous Control

Authors: Peter Schafhalter, Alexander Krentsel, Hongbo Wei, Joseph E. Gonzalez, Sylvia Ratnasamy, Scott Shenker, and Ion Stoica

Published in: OASIcs, Volume 139, 1st New Ideas in Networked Systems (NINeS 2026)


Abstract
Autonomous driving system progress has been driven by improvements in machine learning (ML) models, whose computational demands now exceed what edge devices alone can provide. The cloud offers abundant compute, but the network has long been treated as an unreliable bottleneck rather than a co-equal part of the autonomous vehicle control loop. We argue that this separation is no longer tenable: safety-critical autonomy requires co-design of control, models, and network resource allocation itself. We introduce TURBO, a cloud-augmented control framework that addresses this challenge, formulating bandwidth allocation and control pipeline configuration across both the car and cloud as a joint optimization problem. TURBO maximizes benefit to the car while guaranteeing safety in the face of highly variable network conditions. We implement TURBO and evaluate it in both simulation and real-world deployment, showing it can improve average accuracy by up to 15.6%pt over existing on-vehicle-only pipelines. Our code is made available at www.github.com/NetSys/turbo.

Cite as

Peter Schafhalter, Alexander Krentsel, Hongbo Wei, Joseph E. Gonzalez, Sylvia Ratnasamy, Scott Shenker, and Ion Stoica. TURBO: Utility-Aware Bandwidth Allocation for Cloud-Augmented Autonomous Control. In 1st New Ideas in Networked Systems (NINeS 2026). Open Access Series in Informatics (OASIcs), Volume 139, pp. 18:1-18:34, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{schafhalter_et_al:OASIcs.NINeS.2026.18,
  author =	{Schafhalter, Peter and Krentsel, Alexander and Wei, Hongbo and Gonzalez, Joseph E. and Ratnasamy, Sylvia and Shenker, Scott and Stoica, Ion},
  title =	{{TURBO: Utility-Aware Bandwidth Allocation for Cloud-Augmented Autonomous Control}},
  booktitle =	{1st New Ideas in Networked Systems (NINeS 2026)},
  pages =	{18:1--18:34},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-414-7},
  ISSN =	{2190-6807},
  year =	{2026},
  volume =	{139},
  editor =	{Argyraki, Katerina and Panda, Aurojit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.NINeS.2026.18},
  URN =		{urn:nbn:de:0030-drops-256039},
  doi =		{10.4230/OASIcs.NINeS.2026.18},
  annote =	{Keywords: autonomous vehicles, bandwidth allocation, cloud computing, edge computing, machine learning}
}
Document
Simulate Before Sending: Rethinking Transport in Datacenter Networks

Authors: Dan Straussman, Isaac Keslassy, Alexander Shpiner, and Liran Liss

Published in: OASIcs, Volume 139, 1st New Ideas in Networked Systems (NINeS 2026)


Abstract
Existing transport protocols in commodity datacenter networks struggle to provide low collective completion times (CCTs) to AI training collectives, as packet losses and retransmissions significantly degrade performance. We propose dcSim, an efficient transport that achieves low CCTs and practically lossless performance with commodity switches. In dcSim, each packet first employs a small simulation probe to traverse the network and explore congestion along a candidate path. Only packets whose simulation probes succeed are then transmitted, expecting to succeed as well. Evaluations confirm that dcSim achieves faster CCTs than existing schemes, with small queues and virtually zero packet loss. Finally, dcSim also excels in adverse conditions, including oversubscribed topologies.

Cite as

Dan Straussman, Isaac Keslassy, Alexander Shpiner, and Liran Liss. Simulate Before Sending: Rethinking Transport in Datacenter Networks. In 1st New Ideas in Networked Systems (NINeS 2026). Open Access Series in Informatics (OASIcs), Volume 139, pp. 19:1-19:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{straussman_et_al:OASIcs.NINeS.2026.19,
  author =	{Straussman, Dan and Keslassy, Isaac and Shpiner, Alexander and Liss, Liran},
  title =	{{Simulate Before Sending: Rethinking Transport in Datacenter Networks}},
  booktitle =	{1st New Ideas in Networked Systems (NINeS 2026)},
  pages =	{19:1--19:22},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-414-7},
  ISSN =	{2190-6807},
  year =	{2026},
  volume =	{139},
  editor =	{Argyraki, Katerina and Panda, Aurojit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.NINeS.2026.19},
  URN =		{urn:nbn:de:0030-drops-256044},
  doi =		{10.4230/OASIcs.NINeS.2026.19},
  annote =	{Keywords: Datacenter networks, transport protocols, AI training, lossless networks}
}
Document
SwiftQueue: Optimizing Low-Latency Applications with Swift Packet Queuing

Authors: Siddhant Ray, Xi Jiang, Jack Luo, Nick Feamster, and Junchen Jiang

Published in: OASIcs, Volume 139, 1st New Ideas in Networked Systems (NINeS 2026)


Abstract
Low Latency, Low Loss, and Scalable Throughput (L4S), as an emerging router-queue management technique, has seen steady deployment in the industry. An L4S-enabled router assigns each packet to the queue based on the packet header marking. Currently, L4S employs per-flow queue selection, i.e., all packets of a flow are marked the same way and thus use the same queues, even though each packet is marked separately. However, this may hurt tail latency and latency-sensitive applications because transient congestion and queue buildups may only affect a fraction of packets in a flow. We present SwiftQueue, a new L4S queue-selection strategy in which a sender uses a novel per-packet latency predictor to pinpoint which packets likely have latency spikes or drops. The insight is that many packet-level latency variations result from complex interactions among recent packets at shared router queues. Yet, these intricate packet-level latency patterns are hard to learn efficiently by traditional models. Instead, SwiftQueue uses a custom Transformer, which is well-studied for its expressiveness on sequential patterns, to predict the next packet’s latency based on the latencies of recently received ACKs. Based on the predicted latency of each outgoing packet, SwiftQueue’s sender dynamically marks the L4S packet header to assign packets to potentially different queues, even within the same flow. Using real network traces, we show that SwiftQueue is 45-65% more accurate in predicting latency and its variations than state-of-art methods. Based on its latency prediction, SwiftQueue reduces the tail latency for L4S-enabled flows by 36-45%, compared with the existing L4S queue-selection method.

Cite as

Siddhant Ray, Xi Jiang, Jack Luo, Nick Feamster, and Junchen Jiang. SwiftQueue: Optimizing Low-Latency Applications with Swift Packet Queuing. In 1st New Ideas in Networked Systems (NINeS 2026). Open Access Series in Informatics (OASIcs), Volume 139, pp. 24:1-24:29, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{ray_et_al:OASIcs.NINeS.2026.24,
  author =	{Ray, Siddhant and Jiang, Xi and Luo, Jack and Feamster, Nick and Jiang, Junchen},
  title =	{{SwiftQueue: Optimizing Low-Latency Applications with Swift Packet Queuing}},
  booktitle =	{1st New Ideas in Networked Systems (NINeS 2026)},
  pages =	{24:1--24:29},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-414-7},
  ISSN =	{2190-6807},
  year =	{2026},
  volume =	{139},
  editor =	{Argyraki, Katerina and Panda, Aurojit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.NINeS.2026.24},
  URN =		{urn:nbn:de:0030-drops-256093},
  doi =		{10.4230/OASIcs.NINeS.2026.24},
  annote =	{Keywords: Latency prediction, L4S Queue Management}
}
Document
OrbitalBrain: A Distributed Framework for Training ML Models in Space

Authors: Om Chabra, Chenning Li, Kevin Hsieh, Santiago Segarra, Behnaz Arzani, Peder Olsen, and Ranveer Chandra

Published in: OASIcs, Volume 139, 1st New Ideas in Networked Systems (NINeS 2026)


Abstract
Earth observation nanosatellites capture high-resolution photos of the Earth in near real-time. These images increasingly support ML applications that are critical for safety and response, such as forest fire and flood detection. However, the downlink bandwidth is limited, resulting in days or weeks of delay from image capture to training. In this work, we propose OrbitalBrain, an efficient in-space distributed ML training framework that leverages limited and predictable satellite compute, bandwidth, and power to intelligently balance data transfer, model aggregation, and local training. Our evaluations demonstrate that OrbitalBrain achieves 1.52×-12.4× speedup in time-to-accuracy while always reaching a higher final model accuracy compared to state-of-the-art ground-based or federated learning baselines. Furthermore, our approach is complementary to satellite imagery capturing and downloading, enhancing the overall efficiency of satellite-based applications.

Cite as

Om Chabra, Chenning Li, Kevin Hsieh, Santiago Segarra, Behnaz Arzani, Peder Olsen, and Ranveer Chandra. OrbitalBrain: A Distributed Framework for Training ML Models in Space. In 1st New Ideas in Networked Systems (NINeS 2026). Open Access Series in Informatics (OASIcs), Volume 139, pp. 5:1-5:32, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{chabra_et_al:OASIcs.NINeS.2026.5,
  author =	{Chabra, Om and Li, Chenning and Hsieh, Kevin and Segarra, Santiago and Arzani, Behnaz and Olsen, Peder and Chandra, Ranveer},
  title =	{{OrbitalBrain: A Distributed Framework for Training ML Models in Space}},
  booktitle =	{1st New Ideas in Networked Systems (NINeS 2026)},
  pages =	{5:1--5:32},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-414-7},
  ISSN =	{2190-6807},
  year =	{2026},
  volume =	{139},
  editor =	{Argyraki, Katerina and Panda, Aurojit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.NINeS.2026.5},
  URN =		{urn:nbn:de:0030-drops-255907},
  doi =		{10.4230/OASIcs.NINeS.2026.5},
  annote =	{Keywords: Satellite networks, Distributed machine learning, Federated learning, Earth observation, In-orbit computing}
}
Document
Research
Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web

Authors: Florian Ruosch, Cristina Sarasua, and Abraham Bernstein

Published in: TGDK, Volume 3, Issue 3 (2025). Transactions on Graph Data and Knowledge, Volume 3, Issue 3


Abstract
In Argument Mining, predicting argumentative relations between texts (or spans) remains one of the most challenging aspects, even more so in the cross-document setting. This paper makes three key contributions to advance research in this domain. We first extend an existing dataset, the Sci-Arg corpus, by annotating it with explicit inter-document argumentative relations, thereby allowing arguments to be distributed over several documents forming an Argument Web; these new annotations are published using Semantic Web technologies (RDF, OWL). Second, we explore and evaluate three automated approaches for predicting these inter-document argumentative relations, establishing critical baselines on the new dataset. We find that a simple classifier based on discourse indicators with access to context outperforms neural methods. Third, we conduct a comparative analysis of these approaches for both intra- and inter-document settings, identifying statistically significant differences in results that indicate the necessity of distinguishing between these two scenarios. Our findings highlight significant challenges in this complex domain and open crucial avenues for future research on the Argument Web of Science, particularly for those interested in leveraging Semantic Web technologies and knowledge graphs to understand scholarly discourse. With this, we provide the first stepping stones in the form of a benchmark dataset, three baseline methods, and an initial analysis for a systematic exploration of this field relevant to the Web of Data and Science.

Cite as

Florian Ruosch, Cristina Sarasua, and Abraham Bernstein. Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web. In Transactions on Graph Data and Knowledge (TGDK), Volume 3, Issue 3, pp. 4:1-4:33, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@Article{ruosch_et_al:TGDK.3.3.4,
  author =	{Ruosch, Florian and Sarasua, Cristina and Bernstein, Abraham},
  title =	{{Mining Inter-Document Argument Structures in Scientific Papers for an Argument Web}},
  journal =	{Transactions on Graph Data and Knowledge},
  pages =	{4:1--4:33},
  ISSN =	{2942-7517},
  year =	{2025},
  volume =	{3},
  number =	{3},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/TGDK.3.3.4},
  URN =		{urn:nbn:de:0030-drops-252159},
  doi =		{10.4230/TGDK.3.3.4},
  annote =	{Keywords: Argument Mining, Large Language Models, Knowledge Graphs, Link Prediction}
}
Document
Mixed-Initiative Dynamic Autonomy Through Variable Levels of Immersion and Control (MIDA-VIC): A New Paradigm for Collaborative Robotic Teleoperation in Space Exploration

Authors: Hans-Christian Jetter, Leon Raule, Jens Gerken, and Sören Pirk

Published in: OASIcs, Volume 130, Advancing Human-Computer Interaction for Space Exploration (SpaceCHI 2025)


Abstract
In this position paper, we propose the new control paradigm and conceptual framework MIDA-VIC for collaborative robotic teleoperation in space exploration and beyond. Such teleoperation is a complex and demanding team effort with distributed responsibilities that require both efficient human-robot and human-human collaboration. To address these challenges, we propose a new paradigm of mixed-initiative dynamic autonomy for robotic teleoperation. It exploits recent advances in human-computer interaction (HCI), human-robot interaction (HRI), augmented and virtual reality (AR/VR), and artificial intelligence (AI) research. By integrating methods from multiple fields, our paradigm allows human operators to choose their preferred level of immersion, from traditional 2D graphical user interfaces (GUIs) to fully immersive AR/VR environments. It also supports a dynamic adjustment of the level of control, ranging from direct motor commands (e.g., using a joystick) to high-level task delegation using AI (e.g., instructing the robot via natural language to select a path or explore autonomously). In addition, we propose a mixed-initiative paradigm in which a robot can also take the initiative, request human assistance, and propose the specific level of immersion and control to the human operator that it currently considers useful for effective and efficient collaboration.

Cite as

Hans-Christian Jetter, Leon Raule, Jens Gerken, and Sören Pirk. Mixed-Initiative Dynamic Autonomy Through Variable Levels of Immersion and Control (MIDA-VIC): A New Paradigm for Collaborative Robotic Teleoperation in Space Exploration. In Advancing Human-Computer Interaction for Space Exploration (SpaceCHI 2025). Open Access Series in Informatics (OASIcs), Volume 130, pp. 22:1-22:10, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{jetter_et_al:OASIcs.SpaceCHI.2025.22,
  author =	{Jetter, Hans-Christian and Raule, Leon and Gerken, Jens and Pirk, S\"{o}ren},
  title =	{{Mixed-Initiative Dynamic Autonomy Through Variable Levels of Immersion and Control (MIDA-VIC): A New Paradigm for Collaborative Robotic Teleoperation in Space Exploration}},
  booktitle =	{Advancing Human-Computer Interaction for Space Exploration (SpaceCHI 2025)},
  pages =	{22:1--22:10},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-384-3},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{130},
  editor =	{Bensch, Leonie and Nilsson, Tommy and Nisser, Martin and Pataranutaporn, Pat and Schmidt, Albrecht and Sumini, Valentina},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.SpaceCHI.2025.22},
  URN =		{urn:nbn:de:0030-drops-240122},
  doi =		{10.4230/OASIcs.SpaceCHI.2025.22},
  annote =	{Keywords: Collaboration, Teleoperation, Robot, Space Exploration}
}
Document
Compositional Reasoning for Parametric Probabilistic Automata

Authors: Hannah Mertens, Tim Quatmann, and Joost-Pieter Katoen

Published in: LIPIcs, Volume 348, 36th International Conference on Concurrency Theory (CONCUR 2025)


Abstract
We establish an assume-guarantee (AG) framework for compositional reasoning about multi-objective queries in parametric probabilistic automata (pPA) - an extension to probabilistic automata (PA), where transition probabilities are functions over a finite set of parameters. We lift an existing framework for PA to the pPA setting, incorporating asymmetric, circular, and interleaving proof rules. Our approach enables the verification of a broad spectrum of multi-objective queries for pPA, encompassing probabilistic properties and (parametric) expected total rewards. Additionally, we introduce a rule for reasoning about monotonicity in composed pPAs.

Cite as

Hannah Mertens, Tim Quatmann, and Joost-Pieter Katoen. Compositional Reasoning for Parametric Probabilistic Automata. In 36th International Conference on Concurrency Theory (CONCUR 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 348, pp. 31:1-31:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{mertens_et_al:LIPIcs.CONCUR.2025.31,
  author =	{Mertens, Hannah and Quatmann, Tim and Katoen, Joost-Pieter},
  title =	{{Compositional Reasoning for Parametric Probabilistic Automata}},
  booktitle =	{36th International Conference on Concurrency Theory (CONCUR 2025)},
  pages =	{31:1--31:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-389-8},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{348},
  editor =	{Bouyer, Patricia and van de Pol, Jaco},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CONCUR.2025.31},
  URN =		{urn:nbn:de:0030-drops-239810},
  doi =		{10.4230/LIPIcs.CONCUR.2025.31},
  annote =	{Keywords: Verification, Probabilistic systems, Assume-guarantee reasoning, Parametric Probabilistic Automata, Parameter synthesis}
}
Document
DiVerG: Scalable Distance Index for Validation of Paired-End Alignments in Sequence Graphs

Authors: Ali Ghaffaari, Alexander Schönhuth, and Tobias Marschall

Published in: LIPIcs, Volume 344, 25th International Conference on Algorithms for Bioinformatics (WABI 2025)


Abstract
Determining the distance between two loci within a genomic region is a recurrent operation in various tasks in computational genomics. A notable example of this task arises in paired-end read mapping as a form of validation of distances between multiple alignments. While straightforward for a single genome, graph-based reference structures render the operation considerably more involved. Given the sheer number of such queries in a typical read mapping experiment, an efficient algorithm for answering distance queries is crucial. In this paper, we introduce DiVerG, a compact data structure as well as a fast and scalable algorithm, for constructing distance indexes for general sequence graphs on multi-core CPU and many-core GPU architectures. DiVerG is based on PairG [Jain et al., 2019], but overcomes the limitations of PairG by exploiting the extensive potential for improvements in terms of scalability and space efficiency. As a consequence, DiVerG can process substantially larger datasets, such as whole human genomes, which are unmanageable by PairG. DiVerG offers faster index construction time and consistently faster query time with gains proportional to the size of the underlying compact data structure. We demonstrate that our method performs favorably on multiple real datasets at various scales. DiVerG achieves superior performance over PairG; e.g. resulting to 2.5-4x speed-up in query time, 44-340x smaller index size, and 3-50x faster construction time for the genome graph of the MHC region, as a particularly variable region of the human genome. The implementation is available at: https://github.com/cartoonist/diverg

Cite as

Ali Ghaffaari, Alexander Schönhuth, and Tobias Marschall. DiVerG: Scalable Distance Index for Validation of Paired-End Alignments in Sequence Graphs. In 25th International Conference on Algorithms for Bioinformatics (WABI 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 344, pp. 10:1-10:24, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{ghaffaari_et_al:LIPIcs.WABI.2025.10,
  author =	{Ghaffaari, Ali and Sch\"{o}nhuth, Alexander and Marschall, Tobias},
  title =	{{DiVerG: Scalable Distance Index for Validation of Paired-End Alignments in Sequence Graphs}},
  booktitle =	{25th International Conference on Algorithms for Bioinformatics (WABI 2025)},
  pages =	{10:1--10:24},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-386-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{344},
  editor =	{Brejov\'{a}, Bro\v{n}a and Patro, Rob},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2025.10},
  URN =		{urn:nbn:de:0030-drops-239369},
  doi =		{10.4230/LIPIcs.WABI.2025.10},
  annote =	{Keywords: Sequence graph, distance index, read mapping, sparse matrix}
}
Document
Large Multi-Modal Model Cartographic Map Comprehension for Textual Locality Georeferencing

Authors: Kalana Wijegunarathna, Kristin Stock, and Christopher B. Jones

Published in: LIPIcs, Volume 346, 13th International Conference on Geographic Information Science (GIScience 2025)


Abstract
Millions of biological sample records collected in the last few centuries archived in natural history collections are un-georeferenced. Georeferencing complex locality descriptions associated with these collection samples is a highly labour-intensive task collection agencies struggle with. None of the existing automated methods exploit maps that are an essential tool for georeferencing complex relations. We present preliminary experiments and results of a novel method that exploits multi-modal capabilities of recent Large Multi-Modal Models (LMM). This method enables the model to visually contextualize spatial relations it reads in the locality description. We use a grid-based approach to adapt these auto-regressive models for this task in a zero-shot setting. Our experiments conducted on a small manually annotated dataset show impressive results for our approach (∼1 km Average distance error) compared to uni-modal georeferencing with Large Language Models and existing georeferencing tools. The paper also discusses the findings of the experiments in light of an LMM’s ability to comprehend fine-grained maps. Motivated by these results, a practical framework is proposed to integrate this method into a georeferencing workflow.

Cite as

Kalana Wijegunarathna, Kristin Stock, and Christopher B. Jones. Large Multi-Modal Model Cartographic Map Comprehension for Textual Locality Georeferencing. In 13th International Conference on Geographic Information Science (GIScience 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 346, pp. 12:1-12:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{wijegunarathna_et_al:LIPIcs.GIScience.2025.12,
  author =	{Wijegunarathna, Kalana and Stock, Kristin and Jones, Christopher B.},
  title =	{{Large Multi-Modal Model Cartographic Map Comprehension for Textual Locality Georeferencing}},
  booktitle =	{13th International Conference on Geographic Information Science (GIScience 2025)},
  pages =	{12:1--12:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-378-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{346},
  editor =	{Sila-Nowicka, Katarzyna and Moore, Antoni and O'Sullivan, David and Adams, Benjamin and Gahegan, Mark},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.GIScience.2025.12},
  URN =		{urn:nbn:de:0030-drops-238412},
  doi =		{10.4230/LIPIcs.GIScience.2025.12},
  annote =	{Keywords: Large Multi-Modal Models, Large Language Models, LLM, Georeferencing, Natural History collections}
}
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