27 Search Results for "Tan, Johnson"


Document
Product Structure and Treewidth of Hyperbolic Uniform Disk Graphs

Authors: Thomas Bläsius, Emil Dohse, Deborah Haun, and Laura Merker

Published in: LIPIcs, Volume 367, 42nd International Symposium on Computational Geometry (SoCG 2026)


Abstract
Hyperbolic uniform disk graphs (HUDGs) are intersection graphs of disks with some radius r in the hyperbolic plane, where r may be constant or depend on the number of vertices in a family of HUDGs. We show that HUDGs with constant clique number do not admit product structure, i.e., that there is no constant c such that every such graph is a subgraph of H ⊠ P for some graph H of treewidth at most c. This justifies that HUDGs are described as not having a grid-like structure in the literature, and is in contrast to unit disk graphs in the Euclidean plane, whose grid-like structure is evident from the fact that they are subgraphs of the strong product of two paths and a clique of constant size [Dvořák et al., '21, MATRIX Annals]. By allowing H to be any graph of constant treewidth instead of a path-like graph, we reject the possibility of a grid-like structure not merely by the maximum degree (which is unbounded for HUDGs) but due to their global structure. We complement this by showing that for every (sub-)constant r, HUDGs admit product structure, whereas the typical hyperbolic behavior is observed if r grows with the number of vertices. Our proof involves a family of n-vertex HUDGs with radius log n that has bounded clique number but unbounded treewidth, and one for which the ratio of treewidth and clique number is log n / log log n. Up to a log log n factor, this negatively answers a question raised by Bläsius et al. [SoCG '25] asking whether balanced separators of HUDGs with radius log n can be covered by less than log n cliques. Our results also imply that the local and layered tree-independence number of HUDGs are both unbounded, answering an open question of Dallard et al. [arXiv '25].

Cite as

Thomas Bläsius, Emil Dohse, Deborah Haun, and Laura Merker. Product Structure and Treewidth of Hyperbolic Uniform Disk Graphs. In 42nd International Symposium on Computational Geometry (SoCG 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 367, pp. 18:1-18:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{blasius_et_al:LIPIcs.SoCG.2026.18,
  author =	{Bl\"{a}sius, Thomas and Dohse, Emil and Haun, Deborah and Merker, Laura},
  title =	{{Product Structure and Treewidth of Hyperbolic Uniform Disk Graphs}},
  booktitle =	{42nd International Symposium on Computational Geometry (SoCG 2026)},
  pages =	{18:1--18:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-418-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{367},
  editor =	{Ahn, Hee-Kap and Hoffmann, Michael and Nayyeri, Amir},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2026.18},
  URN =		{urn:nbn:de:0030-drops-258249},
  doi =		{10.4230/LIPIcs.SoCG.2026.18},
  annote =	{Keywords: hyperbolic uniform disk graphs, product structure, treewidth}
}
Document
Scalable Routing in a City-Scale Wi-Fi Network for Disaster Recovery

Authors: Ziqian Liu, Om Chabra, James Lynch, Aaron Martin, Chenning Li, and Hari Balakrishnan

Published in: OASIcs, Volume 139, 1st New Ideas in Networked Systems (NINeS 2026)


Abstract
This paper presents CityMesh, a city-scale decentralized mesh network designed for disaster recovery and emergency scenarios. When wide-area Internet connectivity is unavailable or severely degraded, CityMesh leverages both static access points and mobile devices equipped with Wi-Fi to provide intra-city connectivity and reach opportunistic gateways to the Internet (e.g., via satellite links). The main contribution of this paper is a scalable routing protocol that supports millions of devices, addressing a long-standing limitation of wireless mesh and mobile ad hoc networks. Unlike prior approaches, CityMesh exploits rich building-location and building-geometry data from widely available city maps to guide route computation, improving packet delivery while significantly reducing transmission overhead. Simulation results from 70 cities show that CityMesh improves packet delivery rates by 88% over WEAVE (a state-of-the-art geographic routing protocol). A campus-scale deployment of 300 Wi-Fi devices across 31 buildings shows the practical deployability of CityMesh. These results demonstrate the promise of map-aware routing as a foundation for scalable, resilient city-wide Wi-Fi networks.

Cite as

Ziqian Liu, Om Chabra, James Lynch, Aaron Martin, Chenning Li, and Hari Balakrishnan. Scalable Routing in a City-Scale Wi-Fi Network for Disaster Recovery. In 1st New Ideas in Networked Systems (NINeS 2026). Open Access Series in Informatics (OASIcs), Volume 139, pp. 10:1-10:31, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{liu_et_al:OASIcs.NINeS.2026.10,
  author =	{Liu, Ziqian and Chabra, Om and Lynch, James and Martin, Aaron and Li, Chenning and Balakrishnan, Hari},
  title =	{{Scalable Routing in a City-Scale Wi-Fi Network for Disaster Recovery}},
  booktitle =	{1st New Ideas in Networked Systems (NINeS 2026)},
  pages =	{10:1--10:31},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-414-7},
  ISSN =	{2190-6807},
  year =	{2026},
  volume =	{139},
  editor =	{Argyraki, Katerina and Panda, Aurojit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.NINeS.2026.10},
  URN =		{urn:nbn:de:0030-drops-255954},
  doi =		{10.4230/OASIcs.NINeS.2026.10},
  annote =	{Keywords: mesh networking, disaster recovery, geographic routing, scalability, Wi-Fi}
}
Document
BISCAY: Practical Radio KPI Driven Congestion Control for Mobile Networks

Authors: Jon Larrea, Tanya Shreedhar, Atte Niemi, Adel Sefiane, and Mahesh K. Marina

Published in: OASIcs, Volume 139, 1st New Ideas in Networked Systems (NINeS 2026)


Abstract
Mobile application performance is often bottlenecked by cellular links with rapid bandwidth fluctuations. We show that radio KPIs from the device chipset can precisely and promptly measure available cellular bandwidth. Building on this, we propose Biscay, a practical KPI-driven congestion control for mobile networks. Biscay leverages OpenDiag, an in-kernel, real-time KPI extractor we introduce along with a KPI-based bandwidth estimator to adjust the congestion window, utilizing available bandwidth while minimizing delay. We implement Biscay and OpenDiag on unrooted Android 5G phones. Across trace-driven emulations and real-world 4G/5G experiments, Biscay outperforms state-of-the-art CCAs (e.g., BBR, CUBIC), typically reducing average and tail delay by >90% while matching or improving throughput. These gains stem from OpenDiag’s 100× finer on-device KPI granularity than existing alternatives like MobileInsight.

Cite as

Jon Larrea, Tanya Shreedhar, Atte Niemi, Adel Sefiane, and Mahesh K. Marina. BISCAY: Practical Radio KPI Driven Congestion Control for Mobile Networks. In 1st New Ideas in Networked Systems (NINeS 2026). Open Access Series in Informatics (OASIcs), Volume 139, pp. 15:1-15:32, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{larrea_et_al:OASIcs.NINeS.2026.15,
  author =	{Larrea, Jon and Shreedhar, Tanya and Niemi, Atte and Sefiane, Adel and Marina, Mahesh K.},
  title =	{{BISCAY: Practical Radio KPI Driven Congestion Control for Mobile Networks}},
  booktitle =	{1st New Ideas in Networked Systems (NINeS 2026)},
  pages =	{15:1--15:32},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-414-7},
  ISSN =	{2190-6807},
  year =	{2026},
  volume =	{139},
  editor =	{Argyraki, Katerina and Panda, Aurojit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.NINeS.2026.15},
  URN =		{urn:nbn:de:0030-drops-256002},
  doi =		{10.4230/OASIcs.NINeS.2026.15},
  annote =	{Keywords: Cellular Networks, Congestion Control, LTE/5G}
}
Document
Factorised Representations of Join Queries: Tight Bounds and a New Dichotomy

Authors: Christoph Berkholz and Harry Vinall-Smeeth

Published in: LIPIcs, Volume 365, 29th International Conference on Database Theory (ICDT 2026)


Abstract
A common theme in factorised databases and knowledge compilation is the representation of solution sets in a useful yet succinct data structure. In this paper, we study the representation of the result of join queries (or, equivalently, the set of homomorphisms between two relational structures). We focus on the very general format of {∪,×}-circuits - also known as d-representations or DNNF circuits - and aim to find the limits of this approach. In prior work, it has been shown that there always exists a {∪,×}-circuit of size N^O(subw) representing the query result, where N is the size of the database and subw the submodular width of the query. If the arity of all relations is bounded by a constant, then subw is linear in the treewidth tw of the query. In this setting, the authors of this paper proved a lower bound of N^Ω(tw^ε) on the circuit size (ICALP 2023), where ε > 0 depends on the excluded grid theorem. Our first main contribution is to improve this lower bound to N^Ω(tw), which is tight up to a constant factor in the exponent. Our second contribution is a N^Ω(subw^{1/4}) lower bound on the circuit size for join queries over relations of unbounded arity. Both lower bounds are unconditional lower bounds on the circuit size for well-chosen database instances. Their proofs use a combination of structural (hyper)graph theory with communication complexity in a simple yet novel way. While the second lower bound is asymptotically equivalent to Marx’s conditional bound on the decision complexity (JACM 2013), our N^Θ(tw) bound in the bounded arity setting is tight, while the best conditional bound on the decision complexity is N^Ω(tw/log tw). Note that removing this logarithmic factor in the decision setting is a major open problem.

Cite as

Christoph Berkholz and Harry Vinall-Smeeth. Factorised Representations of Join Queries: Tight Bounds and a New Dichotomy. In 29th International Conference on Database Theory (ICDT 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 365, pp. 11:1-11:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)


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@InProceedings{berkholz_et_al:LIPIcs.ICDT.2026.11,
  author =	{Berkholz, Christoph and Vinall-Smeeth, Harry},
  title =	{{Factorised Representations of Join Queries: Tight Bounds and a New Dichotomy}},
  booktitle =	{29th International Conference on Database Theory (ICDT 2026)},
  pages =	{11:1--11:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-413-0},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{365},
  editor =	{ten Cate, Balder and Funk, Maurice},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICDT.2026.11},
  URN =		{urn:nbn:de:0030-drops-256255},
  doi =		{10.4230/LIPIcs.ICDT.2026.11},
  annote =	{Keywords: join queries, homomorphisms, factorised databases, succinct representation, knowledge compilation, lower bounds}
}
Document
Clustering in Varying Metrics

Authors: Deeparnab Chakrabarty, Jonathan Conroy, and Ankita Sarkar

Published in: LIPIcs, Volume 360, 45th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2025)


Abstract
We introduce the aggregated clustering problem, where one is given T instances of a center-based clustering task over the same n points, but under different metrics. The goal is to open k centers to minimize an aggregate of the clustering costs - e.g., the average or maximum - where the cost is measured via k-center/median/means objectives. More generally, we minimize a norm Ψ over the T cost values. We show that for T ≥ 3, the problem is inapproximable to any finite factor in polynomial time. For T = 2, we give constant-factor approximations. We also show W[2]-hardness when parameterized by k, but obtain f(k,T)poly(n)-time 3-approximations when parameterized by both k and T. When the metrics have structure, we obtain efficient parameterized approximation schemes (EPAS). If all T metrics have bounded ε-scatter dimension, we achieve a (1+ε)-approximation in f(k,T,ε)poly(n) time. If the metrics are induced by edge weights on a common graph G of bounded treewidth tw, and Ψ is the sum function, we get an EPAS in f(T,ε,tw)poly(n,k) time. Conversely, unless (randomized) ETH is false, any finite factor approximation is impossible if parametrized by only T, even when the treewidth is tw = Ω(polylog n).

Cite as

Deeparnab Chakrabarty, Jonathan Conroy, and Ankita Sarkar. Clustering in Varying Metrics. In 45th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 360, pp. 19:1-19:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{chakrabarty_et_al:LIPIcs.FSTTCS.2025.19,
  author =	{Chakrabarty, Deeparnab and Conroy, Jonathan and Sarkar, Ankita},
  title =	{{Clustering in Varying Metrics}},
  booktitle =	{45th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2025)},
  pages =	{19:1--19:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-406-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{360},
  editor =	{Aiswarya, C. and Mehta, Ruta and Roy, Subhajit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.FSTTCS.2025.19},
  URN =		{urn:nbn:de:0030-drops-251007},
  doi =		{10.4230/LIPIcs.FSTTCS.2025.19},
  annote =	{Keywords: Clustering, approximation algorithms, LP rounding, parameterized and exact algorithms, dynamic programming, fixed parameter tractability, hardness of approximation}
}
Document
On the (In)Approximability of the Monitoring Edge Geodetic Set Problem

Authors: Davide Bilò, Giordano Colli, Luca Forlizzi, and Stefano Leucci

Published in: LIPIcs, Volume 359, 36th International Symposium on Algorithms and Computation (ISAAC 2025)


Abstract
We study the minimum Monitoring Edge Geodetic Set (MEG-Set) problem introduced in [Foucaud et al., CALDAM'23]: given a graph G, we say that an edge is monitored by a pair u,v of vertices if all shortest paths between u and v traverse e; the goal is to find a subset M of vertices of G such that each edge of G is monitored by at least one pair of vertices in M, and |M| is minimized. In this paper, we prove that all polynomial-time approximation algorithms for the minimum MEG-Set problem must have an approximation ratio of Ω(log n), unless 𝖯 = NP. To the best of our knowledge, this is the first non-constant inapproximability result known for this problem. We also strengthen the known NP-hardness of the problem on 2-apex graphs by showing that the same result holds for 1-apex graphs. This leaves open the question of determining whether the problem remains NP-hard on planar (i.e., 0-apex) graphs. On the positive side, we design an algorithm that computes good approximate solutions for hereditary graph classes that admit efficiently computable balanced separators of truly sublinear size. This immediately yields polynomial-time approximation algorithms achieving an approximation ratio of O(n^{1/4} √{log n}) on planar graphs, graphs with bounded genus, and k-apex graphs with k = O(n^{1/4}). On graphs with bounded treewidth, we obtain an approximation ratio of O(log^{3/2} n). This compares favorably with the best-known approximation algorithm for general graphs, which achieves an approximation ratio of O(√{n log n}) via a simple reduction to the Set Cover problem.

Cite as

Davide Bilò, Giordano Colli, Luca Forlizzi, and Stefano Leucci. On the (In)Approximability of the Monitoring Edge Geodetic Set Problem. In 36th International Symposium on Algorithms and Computation (ISAAC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 359, pp. 14:1-14:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{bilo_et_al:LIPIcs.ISAAC.2025.14,
  author =	{Bil\`{o}, Davide and Colli, Giordano and Forlizzi, Luca and Leucci, Stefano},
  title =	{{On the (In)Approximability of the Monitoring Edge Geodetic Set Problem}},
  booktitle =	{36th International Symposium on Algorithms and Computation (ISAAC 2025)},
  pages =	{14:1--14:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-408-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{359},
  editor =	{Chen, Ho-Lin and Hon, Wing-Kai and Tsai, Meng-Tsung},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2025.14},
  URN =		{urn:nbn:de:0030-drops-249226},
  doi =		{10.4230/LIPIcs.ISAAC.2025.14},
  annote =	{Keywords: Monitoring Edge Geodetic Set, Inapproximability, Approximation Algorithms}
}
Document
A Unified FPT Framework for Crossing Number Problems

Authors: Éric Colin de Verdière and Petr Hliněný

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)


Abstract
The basic (and traditional) crossing number problem is to determine the minimum number of crossings in a topological drawing of an input graph in the plane. We develop a unified framework that smoothly captures many generalized crossing number problems, and that yields fixed-parameter tractable (FPT) algorithms for them not only in the plane but also on surfaces. Our framework takes the following form. We fix a surface S, an integer r, and a map κ from the set of topological drawings of graphs in S to ℤ_+ ∪ {∞}, satisfying some natural monotonicity conditions, but essentially describing the allowed drawings and how we want to count the crossings in them. Then deciding whether an input graph G has an allowed drawing D on S with κ(D) ≤ r can be done in time quadratic in the size of G (and exponential in other parameters). More generally, we may take as input an edge-colored graph, and distinguish crossings by the colors of the involved edges; and we may allow to perform a bounded number of edge removals and vertex splits to G before drawing it. The proof is a reduction to the embeddability of a graph on a two-dimensional simplicial complex. This framework implies, in a unified way, quadratic FPT algorithms for many topological crossing number variants established in the graph drawing community. Some of these variants already had previously published FPT algorithms, mostly relying on Courcelle’s metatheorem, but for many of those, we obtain an algorithm with a better runtime. Moreover, our framework extends, at no cost, to these crossing number variants in any fixed surface.

Cite as

Éric Colin de Verdière and Petr Hliněný. A Unified FPT Framework for Crossing Number Problems. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 21:1-21:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{colindeverdiere_et_al:LIPIcs.ESA.2025.21,
  author =	{Colin de Verdi\`{e}re, \'{E}ric and Hlin\v{e}n\'{y}, Petr},
  title =	{{A Unified FPT Framework for Crossing Number Problems}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{21:1--21:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.21},
  URN =		{urn:nbn:de:0030-drops-244897},
  doi =		{10.4230/LIPIcs.ESA.2025.21},
  annote =	{Keywords: computational geometry, fixed-parameter tractability, graph drawing, graph embedding, crossing number, two-dimensional simplicial complex, surface}
}
Document
Improved Dominance Filtering for Unions and Minkowski Sums of Pareto Sets

Authors: Konstantinos Karathanasis, Spyros Kontogiannis, and Christos Zaroliagis

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)


Abstract
A key task in multi-objective optimization is to compute the Pareto frontier (a.k.a. Pareto subset) P of a given d-dimensional objective space F; that is, a maximal subset P ⊆ F such that every element in P is non-dominated (i.e., it is better in at least one criterion, against any other point) within F. This process, called dominance-filtering, often involves handling objective spaces derived from either the union or the Minkowski sum of two given partial objective spaces which are Pareto sets themselves, and constitutes a major bottleneck in several multi-objective optimization techniques. In this work, we introduce three new data structures, ND^{+}-trees, QND^{+}-trees and TND^{+}-trees, which are designed for efficiently indexing non-dominated objective vectors and performing dominance-checks. We also devise three new algorithms that efficiently filter out dominated objective vectors from the union or the Minkowski sum of two Pareto sets. An extensive experimental evaluation on both synthetically generated and real-world data sets reveals that our new algorithms outperform state-of-art techniques for dominance-filtering of unions and Minkowski sums of Pareto sets, and scale well w.r.t. the number of d ≥ 3 criteria and the sets' sizes.

Cite as

Konstantinos Karathanasis, Spyros Kontogiannis, and Christos Zaroliagis. Improved Dominance Filtering for Unions and Minkowski Sums of Pareto Sets. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 59:1-59:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{karathanasis_et_al:LIPIcs.ESA.2025.59,
  author =	{Karathanasis, Konstantinos and Kontogiannis, Spyros and Zaroliagis, Christos},
  title =	{{Improved Dominance Filtering for Unions and Minkowski Sums of Pareto Sets}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{59:1--59:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.59},
  URN =		{urn:nbn:de:0030-drops-245277},
  doi =		{10.4230/LIPIcs.ESA.2025.59},
  annote =	{Keywords: Multi-Objective Optimization, Multi-Dimensional Data Structures, Pareto Sets, Algorithm Engineering}
}
Document
Min-Max Correlation Clustering via Neighborhood Similarity

Authors: Nairen Cao, Steven Roche, and Hsin-Hao Su

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)


Abstract
We present an efficient algorithm for the min-max correlation clustering problem. The input is a complete graph where edges are labeled as either positive (+) or negative (-), and the objective is to find a clustering that minimizes the 𝓁_∞-norm of the disagreement vector over all vertices. We address this problem with an efficient (3 + ε)-approximation algorithm that runs in nearly linear time, Õ(|E^+|), where |E^+| denotes the number of positive edges. This improves upon the previous best-known approximation guarantee of 4 by Heidrich, Irmai, and Andres [Heidrich et al., 2024], whose algorithm runs in O(|V|² + |V| D²) time, where |V| is the number of nodes and D is the maximum degree in the graph (V,E^+). Furthermore, we extend our algorithm to the massively parallel computation (MPC) model and the semi-streaming model. In the MPC model, our algorithm runs on machines with memory sublinear in the number of nodes and takes O(1) rounds. In the streaming model, our algorithm requires only Õ(|V|) space, where |V| is the number of vertices in the graph. Our algorithms are purely combinatorial. They are based on a novel structural observation about the optimal min-max instance, which enables the construction of a (3 + ε)-approximation algorithm using O(|E^+|) neighborhood similarity queries. By leveraging random projection, we further show these queries can be computed in nearly linear time.

Cite as

Nairen Cao, Steven Roche, and Hsin-Hao Su. Min-Max Correlation Clustering via Neighborhood Similarity. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 41:1-41:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{cao_et_al:LIPIcs.ESA.2025.41,
  author =	{Cao, Nairen and Roche, Steven and Su, Hsin-Hao},
  title =	{{Min-Max Correlation Clustering via Neighborhood Similarity}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{41:1--41:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.41},
  URN =		{urn:nbn:de:0030-drops-245098},
  doi =		{10.4230/LIPIcs.ESA.2025.41},
  annote =	{Keywords: Min Max Correlation Clustering, Approximate algorithms}
}
Document
The Pyttern Program Query Language

Authors: Julien Liénard, Kim Mens, and Siegfried Nijssen

Published in: OASIcs, Volume 134, Companion Proceedings of the 9th International Conference on the Art, Science, and Engineering of Programming (Programming 2025)


Abstract
Despite the availability of numerous tools and languages for detecting structural patterns in programs, their complexity often presents a steep learning curve. This highlights the need for a program query language that is easier to learn, use, and read while remaining sufficiently expressive for defining and detecting relevant structural coding patterns in program code. To address this challenge, we present Pyttern, a query language that extends Python syntax with regular-expression-inspired wildcards, enabling intuitive pattern-based querying of Python code. Its implementation relies upon a custom pushdown automaton describing how to match patterns over program parse trees, thus providing a robust foundation for structural code analysis. We evaluate Pyttern’s usability and effectiveness through a study involving 35 master’s students, who were asked to write seven different patterns to identify known programming misconceptions. The results demonstrate that Pyttern is both easy to learn and practical to use, at least for analysing small-scale programs.

Cite as

Julien Liénard, Kim Mens, and Siegfried Nijssen. The Pyttern Program Query Language. In Companion Proceedings of the 9th International Conference on the Art, Science, and Engineering of Programming (Programming 2025). Open Access Series in Informatics (OASIcs), Volume 134, pp. 23:1-23:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{lienard_et_al:OASIcs.Programming.2025.23,
  author =	{Li\'{e}nard, Julien and Mens, Kim and Nijssen, Siegfried},
  title =	{{The Pyttern Program Query Language}},
  booktitle =	{Companion Proceedings of the 9th International Conference on the Art, Science, and Engineering of Programming (Programming 2025)},
  pages =	{23:1--23:15},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-382-9},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{134},
  editor =	{Edwards, Jonathan and Perera, Roly and Petricek, Tomas},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.Programming.2025.23},
  URN =		{urn:nbn:de:0030-drops-243075},
  doi =		{10.4230/OASIcs.Programming.2025.23},
  annote =	{Keywords: Pyttern, Program Query Languages, Python, Pattern Matching, Parse Tree, Pushdown Automaton, Static Code Analysis, Wildcards, Tree Pattern Matching}
}
Document
RANDOM
What Is the Minimum Number of Random Bits Required for Computability and Efficiency in Anonymous Networks?

Authors: Dariusz R. Kowalski, Piotr Krysta, and Shay Kutten

Published in: LIPIcs, Volume 353, Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques (APPROX/RANDOM 2025)


Abstract
Angluin (STOC'80) and Yamashita and Kameda (PODC'88) show that some useful distributed tasks are impossible (for deterministic algorithms) in a general network if nodes do not possess unique identifiers. However, any task decidable in the non-distributed context, can be solved deterministically if the network has a unique leader. Alternatively, much research has been devoted to randomized distributed algorithms in anonymous networks. We present tight upper and lower bounds for the fundamental question: How much randomness is necessary and sufficient to solve Leader Election (LE) in anonymous networks, i.e., to transform an anonymous network into a non-anonymous one? We prove that at least one random bit per node is required in some cases. Surprisingly, a single random bit is also enough, for a total of n bits, where n is the number of nodes. However, the time complexity of our (total of) n random bits algorithm for general networks turned out to be impractically high. Hence, we also developed time-efficient algorithms for the very symmetric graphs of cliques and cycles, paying only an additional cost of o(n) random bits. The primary steps of our algorithms are of independent interest. At first glance, it seems that using one random bit per node, any algorithm can distinguish only two sets of nodes: those with 0 and those with 1. Our algorithms manage to partition the nodes into more than two sets with high probability. In some sense, they perform the task of a "distributed pseudorandom generator", for example, one of our algorithms turns n bits, one per node, into n unique (with high probability) numbers. Even though a complete graph looks very symmetric, the algorithms explore interesting asymmetries inherent in any n permutations (of n values each), if each describes the assignment (by the adversary) of ports in a node to edges leading to neighbors. Finally, we show how to transform any randomized algorithm that generates xn+o(n) random bits in total to one where each node generates at most x+1 bits. Our results apply to both synchronous and asynchronous networks.

Cite as

Dariusz R. Kowalski, Piotr Krysta, and Shay Kutten. What Is the Minimum Number of Random Bits Required for Computability and Efficiency in Anonymous Networks?. In Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques (APPROX/RANDOM 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 353, pp. 41:1-41:24, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{kowalski_et_al:LIPIcs.APPROX/RANDOM.2025.41,
  author =	{Kowalski, Dariusz R. and Krysta, Piotr and Kutten, Shay},
  title =	{{What Is the Minimum Number of Random Bits Required for Computability and Efficiency in Anonymous Networks?}},
  booktitle =	{Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques (APPROX/RANDOM 2025)},
  pages =	{41:1--41:24},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-397-3},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{353},
  editor =	{Ene, Alina and Chattopadhyay, Eshan},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.APPROX/RANDOM.2025.41},
  URN =		{urn:nbn:de:0030-drops-244071},
  doi =		{10.4230/LIPIcs.APPROX/RANDOM.2025.41},
  annote =	{Keywords: Distributed computability, Anonymous Networks, Randomness, Leader Election}
}
Document
DiVerG: Scalable Distance Index for Validation of Paired-End Alignments in Sequence Graphs

Authors: Ali Ghaffaari, Alexander Schönhuth, and Tobias Marschall

Published in: LIPIcs, Volume 344, 25th International Conference on Algorithms for Bioinformatics (WABI 2025)


Abstract
Determining the distance between two loci within a genomic region is a recurrent operation in various tasks in computational genomics. A notable example of this task arises in paired-end read mapping as a form of validation of distances between multiple alignments. While straightforward for a single genome, graph-based reference structures render the operation considerably more involved. Given the sheer number of such queries in a typical read mapping experiment, an efficient algorithm for answering distance queries is crucial. In this paper, we introduce DiVerG, a compact data structure as well as a fast and scalable algorithm, for constructing distance indexes for general sequence graphs on multi-core CPU and many-core GPU architectures. DiVerG is based on PairG [Jain et al., 2019], but overcomes the limitations of PairG by exploiting the extensive potential for improvements in terms of scalability and space efficiency. As a consequence, DiVerG can process substantially larger datasets, such as whole human genomes, which are unmanageable by PairG. DiVerG offers faster index construction time and consistently faster query time with gains proportional to the size of the underlying compact data structure. We demonstrate that our method performs favorably on multiple real datasets at various scales. DiVerG achieves superior performance over PairG; e.g. resulting to 2.5-4x speed-up in query time, 44-340x smaller index size, and 3-50x faster construction time for the genome graph of the MHC region, as a particularly variable region of the human genome. The implementation is available at: https://github.com/cartoonist/diverg

Cite as

Ali Ghaffaari, Alexander Schönhuth, and Tobias Marschall. DiVerG: Scalable Distance Index for Validation of Paired-End Alignments in Sequence Graphs. In 25th International Conference on Algorithms for Bioinformatics (WABI 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 344, pp. 10:1-10:24, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{ghaffaari_et_al:LIPIcs.WABI.2025.10,
  author =	{Ghaffaari, Ali and Sch\"{o}nhuth, Alexander and Marschall, Tobias},
  title =	{{DiVerG: Scalable Distance Index for Validation of Paired-End Alignments in Sequence Graphs}},
  booktitle =	{25th International Conference on Algorithms for Bioinformatics (WABI 2025)},
  pages =	{10:1--10:24},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-386-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{344},
  editor =	{Brejov\'{a}, Bro\v{n}a and Patro, Rob},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2025.10},
  URN =		{urn:nbn:de:0030-drops-239369},
  doi =		{10.4230/LIPIcs.WABI.2025.10},
  annote =	{Keywords: Sequence graph, distance index, read mapping, sparse matrix}
}
Document
Research
Designing Output Sensitive Algorithms for Subgraph Enumeration

Authors: Alessio Conte, Kazuhiro Kurita, Andrea Marino, Giulia Punzi, Takeaki Uno, and Kunihiro Wasa

Published in: OASIcs, Volume 132, From Strings to Graphs, and Back Again: A Festschrift for Roberto Grossi's 60th Birthday (2025)


Abstract
The enumeration of all subgraphs respecting some structural property is a fundamental task in theoretical computer science, with practical applications in many branches of data mining and network analysis. It is often of interest to only consider solutions (subgraphs) that are maximal under inclusion, and to achieve output-sensitive complexity, i.e., bounding the running time with respect to the number of subgraphs produced. In this paper, we provide a survey of techniques for designing output-sensitive algorithms for subgraph enumeration, including partition-based approaches such as flashlight search, solution-graph traversal methods such as reverse search, and cost amortization strategies such as push-out amortization. We also briefly discuss classes of efficiency, hardness of enumeration, and variants such as approximate enumeration. The paper is meant as an accessible handbook for learning the basics of the field and as a practical reference for selecting state-of-the-art subgraph enumeration strategies fitting to one’s needs.

Cite as

Alessio Conte, Kazuhiro Kurita, Andrea Marino, Giulia Punzi, Takeaki Uno, and Kunihiro Wasa. Designing Output Sensitive Algorithms for Subgraph Enumeration. In From Strings to Graphs, and Back Again: A Festschrift for Roberto Grossi's 60th Birthday. Open Access Series in Informatics (OASIcs), Volume 132, pp. 19:1-19:40, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{conte_et_al:OASIcs.Grossi.19,
  author =	{Conte, Alessio and Kurita, Kazuhiro and Marino, Andrea and Punzi, Giulia and Uno, Takeaki and Wasa, Kunihiro},
  title =	{{Designing Output Sensitive Algorithms for Subgraph Enumeration}},
  booktitle =	{From Strings to Graphs, and Back Again: A Festschrift for Roberto Grossi's 60th Birthday},
  pages =	{19:1--19:40},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-391-1},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{132},
  editor =	{Conte, Alessio and Marino, Andrea and Rosone, Giovanna and Vitter, Jeffrey Scott},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.Grossi.19},
  URN =		{urn:nbn:de:0030-drops-238180},
  doi =		{10.4230/OASIcs.Grossi.19},
  annote =	{Keywords: Graph algorithms, Graph enumeration, Output sensitive enumeration}
}
Document
Practically Feasible Proof Logging for Pseudo-Boolean Optimization

Authors: Wietze Koops, Daniel Le Berre, Magnus O. Myreen, Jakob Nordström, Andy Oertel, Yong Kiam Tan, and Marc Vinyals

Published in: LIPIcs, Volume 340, 31st International Conference on Principles and Practice of Constraint Programming (CP 2025)


Abstract
Certifying solvers have long been standard for decision problems in Boolean satisfiability (SAT), allowing for proof logging and checking with very limited overhead, but developing similar tools for combinatorial optimization has remained a challenge. A recent promising approach covering a wide range of solving paradigms is pseudo-Boolean proof logging, but this has mostly consisted of proof-of-concept works far from delivering the performance required for real-world deployment. In this work, we present an efficient toolchain based on VeriPB and CakePB for formally verified pseudo-Boolean optimization. We implement proof logging for the full range of techniques in the state-of-the-art solvers RoundingSat and Sat4j, including core-guided search and linear programming integration with Farkas certificates and cut generation. Our experimental evaluation shows that proof logging and checking performance in this much more expressive paradigm is now quite close to the level of SAT solving, and hence is clearly practically feasible.

Cite as

Wietze Koops, Daniel Le Berre, Magnus O. Myreen, Jakob Nordström, Andy Oertel, Yong Kiam Tan, and Marc Vinyals. Practically Feasible Proof Logging for Pseudo-Boolean Optimization. In 31st International Conference on Principles and Practice of Constraint Programming (CP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 340, pp. 21:1-21:27, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{koops_et_al:LIPIcs.CP.2025.21,
  author =	{Koops, Wietze and Le Berre, Daniel and Myreen, Magnus O. and Nordstr\"{o}m, Jakob and Oertel, Andy and Tan, Yong Kiam and Vinyals, Marc},
  title =	{{Practically Feasible Proof Logging for Pseudo-Boolean Optimization}},
  booktitle =	{31st International Conference on Principles and Practice of Constraint Programming (CP 2025)},
  pages =	{21:1--21:27},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-380-5},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{340},
  editor =	{de la Banda, Maria Garcia},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CP.2025.21},
  URN =		{urn:nbn:de:0030-drops-238825},
  doi =		{10.4230/LIPIcs.CP.2025.21},
  annote =	{Keywords: proof logging, certifying algorithms, combinatorial optimization, certification, pseudo-Boolean solving, 0-1 integer linear programming}
}
Document
Efficient Certified Reasoning for Binarized Neural Networks

Authors: Jiong Yang, Yong Kiam Tan, Mate Soos, Magnus O. Myreen, and Kuldeep S. Meel

Published in: LIPIcs, Volume 341, 28th International Conference on Theory and Applications of Satisfiability Testing (SAT 2025)


Abstract
Neural networks have emerged as essential components in safety-critical applications - these use cases demand complex, yet trustworthy computations. Binarized Neural Networks (BNNs) are a type of neural network where each neuron is constrained to a Boolean value; they are particularly well-suited for safety-critical tasks because they retain much of the computational capacities of full-scale (floating-point or quantized) deep neural networks, but remain compatible with satisfiability solvers for qualitative verification and with model counters for quantitative reasoning. However, existing methods for BNN analysis suffer from either limited scalability or susceptibility to soundness errors, which hinders their applicability in real-world scenarios. In this work, we present a scalable and trustworthy approach for both qualitative and quantitative verification of BNNs. Our approach introduces a native representation of BNN constraints in a custom-designed solver for qualitative reasoning, and in an approximate model counter for quantitative reasoning. We further develop specialized proof generation and checking pipelines with native support for BNN constraint reasoning, ensuring trustworthiness for all of our verification results. Empirical evaluations on a BNN robustness verification benchmark suite demonstrate that our certified solving approach achieves a 9× speedup over prior certified CNF and PB-based approaches, and our certified counting approach achieves a 218× speedup over the existing CNF-based baseline. In terms of coverage, our pipeline produces fully certified results for 99% and 86% of the qualitative and quantitative reasoning queries on BNNs, respectively. This is in sharp contrast to the best existing baselines which can fully certify only 62% and 4% of the queries, respectively.

Cite as

Jiong Yang, Yong Kiam Tan, Mate Soos, Magnus O. Myreen, and Kuldeep S. Meel. Efficient Certified Reasoning for Binarized Neural Networks. In 28th International Conference on Theory and Applications of Satisfiability Testing (SAT 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 341, pp. 32:1-32:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)


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@InProceedings{yang_et_al:LIPIcs.SAT.2025.32,
  author =	{Yang, Jiong and Tan, Yong Kiam and Soos, Mate and Myreen, Magnus O. and Meel, Kuldeep S.},
  title =	{{Efficient Certified Reasoning for Binarized Neural Networks}},
  booktitle =	{28th International Conference on Theory and Applications of Satisfiability Testing (SAT 2025)},
  pages =	{32:1--32:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-381-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{341},
  editor =	{Berg, Jeremias and Nordstr\"{o}m, Jakob},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SAT.2025.32},
  URN =		{urn:nbn:de:0030-drops-237665},
  doi =		{10.4230/LIPIcs.SAT.2025.32},
  annote =	{Keywords: Neural network verification, proof certification, SAT solving, approximate model counting}
}
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