18 Search Results for "Adams, Henry"

Document
DOI: 10.4230/LIPIcs.SoCG.2026.3
Lower Bounding the Gromov-Hausdorff Distance in Metric Graphs

Authors: Henry Adams, Sushovan Majhi, Fedor Manin, Žiga Virk, and Nicolò Zava

Published in: LIPIcs, Volume 367, 42nd International Symposium on Computational Geometry (SoCG 2026)

Abstract
Let G be a finite, connected metric graph and let X be a subset of G. If X is sufficiently dense in G, we show that the Gromov-Hausdorff distance matches the Hausdorff distance, namely d_GH(G,X) = d_H(G,X). When the metric graph is the circle G = S¹ with circumference 2π, a recent study established the equality d_GH(S¹,X) = d_H(S¹,X) whenever d_GH(S¹,X) < π/6. Our results relax this hypothesis to d_GH(S¹,X) < π/3, and furthermore, we show that the constant π/3 is the best possible. We lower bound the Gromov-Hausdorff distance d_GH(G,X) by the Hausdorff distance d_H(G,X) via a simple topological obstruction: the existence of a possibly discontinuous function f: G → X with too small distortion contradicts the connectedness of G.
Cite as

Henry Adams, Sushovan Majhi, Fedor Manin, Žiga Virk, and Nicolò Zava. Lower Bounding the Gromov-Hausdorff Distance in Metric Graphs. In 42nd International Symposium on Computational Geometry (SoCG 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 367, pp. 3:1-3:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

Copy BibTex To Clipboard

@InProceedings{adams_et_al:LIPIcs.SoCG.2026.3,
  author =	{Adams, Henry and Majhi, Sushovan and Manin, Fedor and Virk, \v{Z}iga and Zava, Nicol\`{o}},
  title =	{{Lower Bounding the Gromov-Hausdorff Distance in Metric Graphs}},
  booktitle =	{42nd International Symposium on Computational Geometry (SoCG 2026)},
  pages =	{3:1--3:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-418-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{367},
  editor =	{Ahn, Hee-Kap and Hoffmann, Michael and Nayyeri, Amir},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2026.3},
  URN =		{urn:nbn:de:0030-drops-258099},
  doi =		{10.4230/LIPIcs.SoCG.2026.3},
  annote =	{Keywords: Gromov-Hausdorff distance, distortion, connectedness, Borsuk-Ulam theorem}
}
Document
DOI: 10.4230/LIPIcs.SoCG.2026.78
Mapping Chemical Space: Topological Data Analysis of Chemical Latent Space with Mapper

Authors: Dhruv Meduri, Chuan-Shen Hu, Cong Shen, Kelin Xia, and Bei Wang

Published in: LIPIcs, Volume 367, 42nd International Symposium on Computational Geometry (SoCG 2026)

Abstract
The vast chemical space, encompassing virtually innumerable molecules and materials, presents both immense opportunities and significant challenges. The design and discovery of novel drugs and functional materials may be viewed as a search within this space; however, the sheer scale of potential candidates renders exhaustive exploration infeasible. To address this, we introduce Chemical Mapper, a framework that integrates topological data analysis with deep learning to enable the visual exploration and analysis of chemical latent spaces. At its core, Chemical Mapper employs mapper, a widely used tool in topological data analysis, to investigate the organizational principles of chemical latent spaces defined by molecular representations learned by geometric deep learning models. In doing so, Chemical Mapper not only highlights groups of molecular representations but also uncovers the relationships among them through linkages and branching structures. Our results show that Chemical Mapper reveals intrinsic patterns associated with molecular scaffolds, functional groups, and chemical properties, as well as the structural and functional evolutions of the molecules.
Cite as

Dhruv Meduri, Chuan-Shen Hu, Cong Shen, Kelin Xia, and Bei Wang. Mapping Chemical Space: Topological Data Analysis of Chemical Latent Space with Mapper. In 42nd International Symposium on Computational Geometry (SoCG 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 367, pp. 78:1-78:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

Copy BibTex To Clipboard

@InProceedings{meduri_et_al:LIPIcs.SoCG.2026.78,
  author =	{Meduri, Dhruv and Hu, Chuan-Shen and Shen, Cong and Xia, Kelin and Wang, Bei},
  title =	{{Mapping Chemical Space: Topological Data Analysis of Chemical Latent Space with Mapper}},
  booktitle =	{42nd International Symposium on Computational Geometry (SoCG 2026)},
  pages =	{78:1--78:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-418-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{367},
  editor =	{Ahn, Hee-Kap and Hoffmann, Michael and Nayyeri, Amir},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2026.78},
  URN =		{urn:nbn:de:0030-drops-258854},
  doi =		{10.4230/LIPIcs.SoCG.2026.78},
  annote =	{Keywords: Practice of computational topology, topological data analysis, applications in chemistry, mapper algorithm, high-dimensional data analysis, chemical spaces, geometric deep learning, latent space geometry}
}
Document
DOI: 10.4230/LIPIcs.SoCG.2026.79
D-GRIL: End-To-End Topological Learning with 2-Parameter Persistence

Authors: Soham Mukherjee, Shreyas N. Samaga, Cheng Xin, Steve Oudot, and Tamal K. Dey

Published in: LIPIcs, Volume 367, 42nd International Symposium on Computational Geometry (SoCG 2026)

Abstract
End-to-end topological learning using 1-parameter persistence is well-known. We show that the framework can be enhanced using 2-parameter persistence by adopting a recently introduced 2-parameter persistence based vectorization technique called Gril. We establish a theory for gradient descent on Gril producing D-Gril. We show that D-Gril can be used to learn a bifiltration function on benchmark graph datasets. Further, we exhibit that this framework can be applied in the context of bio-activity prediction in drug discovery.
Cite as

Soham Mukherjee, Shreyas N. Samaga, Cheng Xin, Steve Oudot, and Tamal K. Dey. D-GRIL: End-To-End Topological Learning with 2-Parameter Persistence. In 42nd International Symposium on Computational Geometry (SoCG 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 367, pp. 79:1-79:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

Copy BibTex To Clipboard

@InProceedings{mukherjee_et_al:LIPIcs.SoCG.2026.79,
  author =	{Mukherjee, Soham and Samaga, Shreyas N. and Xin, Cheng and Oudot, Steve and Dey, Tamal K.},
  title =	{{D-GRIL: End-To-End Topological Learning with 2-Parameter Persistence}},
  booktitle =	{42nd International Symposium on Computational Geometry (SoCG 2026)},
  pages =	{79:1--79:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-418-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{367},
  editor =	{Ahn, Hee-Kap and Hoffmann, Michael and Nayyeri, Amir},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2026.79},
  URN =		{urn:nbn:de:0030-drops-258865},
  doi =		{10.4230/LIPIcs.SoCG.2026.79},
  annote =	{Keywords: Topological Data Analysis, Persistent Homology, Multiparameter Persistence, Graph Learning, Graph Neural Networks}
}
Document
DOI: 10.4230/LIPIcs.SoCG.2026.82
A Persistent Version of Latschev’s Theorem

Authors: Steve Oudot and Lukas Waas

Published in: LIPIcs, Volume 367, 42nd International Symposium on Computational Geometry (SoCG 2026)

Abstract
Latschev’s theorem provides sufficient conditions on a metric space M and δ > 0 for the homotopy type of M to agree with that of the Vietoris-Rips complex ℛ^δ(𝕄) of any nearby space 𝕄 in the Gromov-Hausdorff distance. We prove a persistent version of this theorem, providing sufficient conditions on a pair (M, f:M → ℝ^N) and δ > 0 for the persistent homotopy type of the sublevel set filtration of (M, f) to be interleaved with that of the function-Rips complex ℛ^δ(𝕄^•) of any nearby pair (𝕄, 𝕗). In particular, our result answers a longstanding question on the related topic of estimating sublevel set persistent homology from finite point samples.
Cite as

Steve Oudot and Lukas Waas. A Persistent Version of Latschev’s Theorem. In 42nd International Symposium on Computational Geometry (SoCG 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 367, pp. 82:1-82:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

Copy BibTex To Clipboard

@InProceedings{oudot_et_al:LIPIcs.SoCG.2026.82,
  author =	{Oudot, Steve and Waas, Lukas},
  title =	{{A Persistent Version of Latschev’s Theorem}},
  booktitle =	{42nd International Symposium on Computational Geometry (SoCG 2026)},
  pages =	{82:1--82:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-418-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{367},
  editor =	{Ahn, Hee-Kap and Hoffmann, Michael and Nayyeri, Amir},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2026.82},
  URN =		{urn:nbn:de:0030-drops-258891},
  doi =		{10.4230/LIPIcs.SoCG.2026.82},
  annote =	{Keywords: Topological data analysis (TDA), metric geometry, Vietoris-Rips complex, homotopy theory, multi-parameter persistent homology}
}
Document
DOI: 10.4230/LIPIcs.SoCG.2026.93
Simplicial Approximation to CW Complexes with Spherical Delaunay Triangulations

Authors: Raphaël Tinarrage

Published in: LIPIcs, Volume 367, 42nd International Symposium on Computational Geometry (SoCG 2026)

Abstract
Simplicial approximation provides a framework for constructing simplicial complexes that are homotopy equivalent to a given manifold, provided a CW structure is explicitly known. However, its conventional implementation quickly becomes intractable on a computer: barycentric subdivision produces poorly shaped simplices, and the star condition introduces many vertices. To address these limitations, this article develops a subdivision scheme based on spherical Delaunay triangulations, which attains better refinement properties than barycentric subdivisions. Moreover, the star condition is reframed as two independent problems, one geometric and the other combinatorial, respectively tackled in the language of locally equiconnected spaces and the list homomorphism problem, allowing an exponential reduction in the number of vertices. Via a prototype implementation, we obtain simplicial complexes homotopy equivalent to Grassmannians and Stiefel manifolds up to dimension 5.
Cite as

Raphaël Tinarrage. Simplicial Approximation to CW Complexes with Spherical Delaunay Triangulations. In 42nd International Symposium on Computational Geometry (SoCG 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 367, pp. 93:1-93:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

Copy BibTex To Clipboard

@InProceedings{tinarrage:LIPIcs.SoCG.2026.93,
  author =	{Tinarrage, Rapha\"{e}l},
  title =	{{Simplicial Approximation to CW Complexes with Spherical Delaunay Triangulations}},
  booktitle =	{42nd International Symposium on Computational Geometry (SoCG 2026)},
  pages =	{93:1--93:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-418-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{367},
  editor =	{Ahn, Hee-Kap and Hoffmann, Michael and Nayyeri, Amir},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2026.93},
  URN =		{urn:nbn:de:0030-drops-258991},
  doi =		{10.4230/LIPIcs.SoCG.2026.93},
  annote =	{Keywords: Triangulation of manifolds, Simplicial approximation, CW complexes, Delaunay complexes, List homomorphism problem, Topological Data Analysis}
}
Document
DOI: 10.4230/LIPIcs.SoCG.2026.94
Mixup Barcodes: Quantifying Geometric-Topological Interactions Between Point Clouds

Authors: Hubert Wagner, Nickolas Arustamyan, Matthew Wheeler, and Peter Bubenik

Published in: LIPIcs, Volume 367, 42nd International Symposium on Computational Geometry (SoCG 2026)

Abstract
We propose a novel geometric-topological descriptor called a mixup barcode. Intuitively, it characterizes the shape of a point cloud as well as its spatial relationship with another point cloud embedded in the same ambient space. More technically, it enriches a standard persistence barcode with information on the image persistent homology. In three dimensions it captures natural spatial relationships like overlap and surrounding; in higher dimensions more intricate spatial relationships are captured. We provide a theoretical setup and a simple algorithm for mixup barcodes. As a proof of concept, we explore data arising in a geometric-topological problem from machine learning. Specifically, we take first steps towards verifying a hypothesis stating that geometric-topological relationships within intermediate point cloud representations in an artificial neural network can hinder its training. More broadly, our experiments suggest that mixup barcodes are useful for characterizing spatial relationships and spatial interactions (i.e. the evolution of spatial relationships) that are hard to directly visualize or capture using standard methods.
Cite as

Hubert Wagner, Nickolas Arustamyan, Matthew Wheeler, and Peter Bubenik. Mixup Barcodes: Quantifying Geometric-Topological Interactions Between Point Clouds. In 42nd International Symposium on Computational Geometry (SoCG 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 367, pp. 94:1-94:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

Copy BibTex To Clipboard

@InProceedings{wagner_et_al:LIPIcs.SoCG.2026.94,
  author =	{Wagner, Hubert and Arustamyan, Nickolas and Wheeler, Matthew and Bubenik, Peter},
  title =	{{Mixup Barcodes: Quantifying Geometric-Topological Interactions Between Point Clouds}},
  booktitle =	{42nd International Symposium on Computational Geometry (SoCG 2026)},
  pages =	{94:1--94:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-418-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{367},
  editor =	{Ahn, Hee-Kap and Hoffmann, Michael and Nayyeri, Amir},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2026.94},
  URN =		{urn:nbn:de:0030-drops-259009},
  doi =		{10.4230/LIPIcs.SoCG.2026.94},
  annote =	{Keywords: mixup barcode, persistent homology, persistence barcode, persistence diagram, image persistent homology, image persistence, deep learning, multilayer perceptron, topology of neural network embeddings, disentanglement}
}
Document
DOI: 10.4230/LIPIcs.SoCG.2026.5
Bifunction and Interlevel Delaunay Trifiltrations

Authors: Ángel Javier Alonso, Michael Kerber, Tung Lam, Michael Lesnick, and Abhishek Rathod

Published in: LIPIcs, Volume 367, 42nd International Symposium on Computational Geometry (SoCG 2026)

Abstract
A key property of the Delaunay filtration is that it is topologically (i.e., weakly) equivalent to the offset (union-of-balls) filtration. Recently, this filtration has been extended to point clouds equipped with an ℝ-valued function, yielding a computable 2-parameter filtration that satisfies an analogous weak equivalence. Motivated in part by the study of time-varying data, we introduce a 3-parameter extension of the Delaunay filtration for point clouds equipped with an ℝ²-valued function, also satisfying an analogous weak equivalence. For a point cloud X ⊂ ℝ^d, our trifiltration has size O(|X|^{⌈(d+1)/2⌉+1}). We present an algorithm that computes this trifiltration in time O(|X|^{⌈d/2⌉+2}), together with an implementation. Our experiments demonstrate that the implementation can handle thousands of points in ℝ³, with memory growth that is nearly linear.
Cite as

Ángel Javier Alonso, Michael Kerber, Tung Lam, Michael Lesnick, and Abhishek Rathod. Bifunction and Interlevel Delaunay Trifiltrations. In 42nd International Symposium on Computational Geometry (SoCG 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 367, pp. 5:1-5:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

Copy BibTex To Clipboard

@InProceedings{alonso_et_al:LIPIcs.SoCG.2026.5,
  author =	{Alonso, \'{A}ngel Javier and Kerber, Michael and Lam, Tung and Lesnick, Michael and Rathod, Abhishek},
  title =	{{Bifunction and Interlevel Delaunay Trifiltrations}},
  booktitle =	{42nd International Symposium on Computational Geometry (SoCG 2026)},
  pages =	{5:1--5:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-418-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{367},
  editor =	{Ahn, Hee-Kap and Hoffmann, Michael and Nayyeri, Amir},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2026.5},
  URN =		{urn:nbn:de:0030-drops-258118},
  doi =		{10.4230/LIPIcs.SoCG.2026.5},
  annote =	{Keywords: Delaunay triangulation, Multiparameter persistent homology, Interlevel, Bowyer-Watson}
}
Document
DOI: 10.4230/LIPIcs.WABI.2025.17
An Efficient Data Structure and Algorithm for Long-Match Query in Run-Length Compressed BWT

Authors: Ahsan Sanaullah, Degui Zhi, and Shaojie Zhang

Published in: LIPIcs, Volume 344, 25th International Conference on Algorithms for Bioinformatics (WABI 2025)

Abstract
String matching problems in bioinformatics are typically for finding exact substring matches between a query and a reference text. Previous formulations often focus on maximum exact matches (MEMs). However, multiple occurrences of substrings of the query in the text that are long enough but not maximal may not be captured by MEMs. Such long matches can be informative, especially when the text is a collection of similar sequences such as genomes. In this paper, we describe a new type of match between a pattern and a text that aren't necessarily maximal in the query, but still contain useful matching information: locally maximal exact matches (LEMs). There are usually a large amount of LEMs, so we only consider those above some length threshold ℒ. These are referred to as long LEMs. The purpose of long LEMs is to capture substring matches between a query and a text that are not necessarily maximal in the pattern but still long enough to be important. Therefore efficient long LEMs finding algorithms are desired for these datasets. However, these datasets are too large to query on traditional string indexes. Fortunately, these datasets are very repetitive. Recently, compressed string indexes that take advantage of the redundancy in the data but retain efficient querying capability have been proposed as a solution. We therefore give an efficient algorithm for computing all the long LEMs of a query and a text in a BWT runs compressed string index. We describe an O(m+occ) expected time algorithm that relies on an O(r) words space string index for outputting all long LEMs of a pattern with respect to a text given the matching statistics of the pattern with respect to the text. Here m is the length of the query, occ is the number of long LEMs outputted, and r is the number of runs in the BWT of the text. The O(r) space string index we describe relies on an adaptation of the move data structure by Nishimoto and Tabei. We are able to support LCP[i] queries in constant time given SA[i]. In other words, we answer PLCP[i] queries in constant time. These PLCP queries enable the efficient long LEM query. Long LEMs may provide useful similarity information between a pattern and a text that MEMs may ignore. This information is particularly useful in pangenome and biobank scale haplotype panel contexts.
Cite as

Ahsan Sanaullah, Degui Zhi, and Shaojie Zhang. An Efficient Data Structure and Algorithm for Long-Match Query in Run-Length Compressed BWT. In 25th International Conference on Algorithms for Bioinformatics (WABI 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 344, pp. 17:1-17:25, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{sanaullah_et_al:LIPIcs.WABI.2025.17,
  author =	{Sanaullah, Ahsan and Zhi, Degui and Zhang, Shaojie},
  title =	{{An Efficient Data Structure and Algorithm for Long-Match Query in Run-Length Compressed BWT}},
  booktitle =	{25th International Conference on Algorithms for Bioinformatics (WABI 2025)},
  pages =	{17:1--17:25},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-386-7},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{344},
  editor =	{Brejov\'{a}, Bro\v{n}a and Patro, Rob},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WABI.2025.17},
  URN =		{urn:nbn:de:0030-drops-239433},
  doi =		{10.4230/LIPIcs.WABI.2025.17},
  annote =	{Keywords: BWT, LEM, Long LEM, MEM, Run Length Compressed BWT, Move Data Structure, Pangenome}
}
Document
DOI: 10.4230/LIPIcs.GIScience.2025.12
Large Multi-Modal Model Cartographic Map Comprehension for Textual Locality Georeferencing

Authors: Kalana Wijegunarathna, Kristin Stock, and Christopher B. Jones

Published in: LIPIcs, Volume 346, 13th International Conference on Geographic Information Science (GIScience 2025)

Abstract
Millions of biological sample records collected in the last few centuries archived in natural history collections are un-georeferenced. Georeferencing complex locality descriptions associated with these collection samples is a highly labour-intensive task collection agencies struggle with. None of the existing automated methods exploit maps that are an essential tool for georeferencing complex relations. We present preliminary experiments and results of a novel method that exploits multi-modal capabilities of recent Large Multi-Modal Models (LMM). This method enables the model to visually contextualize spatial relations it reads in the locality description. We use a grid-based approach to adapt these auto-regressive models for this task in a zero-shot setting. Our experiments conducted on a small manually annotated dataset show impressive results for our approach (∼1 km Average distance error) compared to uni-modal georeferencing with Large Language Models and existing georeferencing tools. The paper also discusses the findings of the experiments in light of an LMM’s ability to comprehend fine-grained maps. Motivated by these results, a practical framework is proposed to integrate this method into a georeferencing workflow.
Cite as

Kalana Wijegunarathna, Kristin Stock, and Christopher B. Jones. Large Multi-Modal Model Cartographic Map Comprehension for Textual Locality Georeferencing. In 13th International Conference on Geographic Information Science (GIScience 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 346, pp. 12:1-12:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{wijegunarathna_et_al:LIPIcs.GIScience.2025.12,
  author =	{Wijegunarathna, Kalana and Stock, Kristin and Jones, Christopher B.},
  title =	{{Large Multi-Modal Model Cartographic Map Comprehension for Textual Locality Georeferencing}},
  booktitle =	{13th International Conference on Geographic Information Science (GIScience 2025)},
  pages =	{12:1--12:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-378-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{346},
  editor =	{Sila-Nowicka, Katarzyna and Moore, Antoni and O'Sullivan, David and Adams, Benjamin and Gahegan, Mark},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.GIScience.2025.12},
  URN =		{urn:nbn:de:0030-drops-238412},
  doi =		{10.4230/LIPIcs.GIScience.2025.12},
  annote =	{Keywords: Large Multi-Modal Models, Large Language Models, LLM, Georeferencing, Natural History collections}
}
Document
DOI: 10.4230/LIPIcs.CP.2025.27
Understanding the Impact of Value Selection Heuristics in Scheduling Problems

Authors: Tim Luchterhand, Emmanuel Hebrard, and Sylvie Thiébaux

Published in: LIPIcs, Volume 340, 31st International Conference on Principles and Practice of Constraint Programming (CP 2025)

Abstract
It has been observed that value selection heuristics have less impact than other heuristic choices when solving hard combinatorial optimization (CO) problems. It is often thought that this is because more time is spent on unsatisfiable sub-problems where the value ordering is irrelevant. In this paper we investigate this belief in the scheduling domain and come up with a more detailed explanation. We find that, even though there are less relevant choices to be made on hard instances, each mistake tends to have a bigger impact, to a point where the potential gain from a value heuristic predominates. Moreover, we observe two interesting and relatively surprising phenomena when solving scheduling problems. First, the accuracy of a given value selection heuristic decreases with the optimality gap. Second, the computational penalty of a mistake increases with the accuracy of the heuristic. For the first observation, we argue that on hard problems, constraint propagation removes a large portion of choices that align with the intuition behind the heuristic. This means that the heuristic faces mostly difficult choices. For the second observation, we argue that simple heuristics tend to make more mistakes on intuitive choice points, and the computational cost for refuting these mistakes is smaller than for those made by a more accurate heuristic.
Cite as

Tim Luchterhand, Emmanuel Hebrard, and Sylvie Thiébaux. Understanding the Impact of Value Selection Heuristics in Scheduling Problems. In 31st International Conference on Principles and Practice of Constraint Programming (CP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 340, pp. 27:1-27:23, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{luchterhand_et_al:LIPIcs.CP.2025.27,
  author =	{Luchterhand, Tim and Hebrard, Emmanuel and Thi\'{e}baux, Sylvie},
  title =	{{Understanding the Impact of Value Selection Heuristics in Scheduling Problems}},
  booktitle =	{31st International Conference on Principles and Practice of Constraint Programming (CP 2025)},
  pages =	{27:1--27:23},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-380-5},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{340},
  editor =	{de la Banda, Maria Garcia},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CP.2025.27},
  URN =		{urn:nbn:de:0030-drops-238885},
  doi =		{10.4230/LIPIcs.CP.2025.27},
  annote =	{Keywords: Scheduling, Branching Heuristics, Constraint Programming}
}
Document
Track A: Algorithms, Complexity and Games
DOI: 10.4230/LIPIcs.ICALP.2025.37
Satisfiability of Commutative vs. Non-Commutative CSPs

Authors: Andrei A. Bulatov and Stanislav Živný

Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)

Abstract
The Mermin-Peres magic square is a celebrated example of a system of Boolean linear equations that is not (classically) satisfiable but is satisfiable via linear operators on a Hilbert space of dimension four. A natural question is then, for what kind of problems such a phenomenon occurs? Atserias, Kolaitis, and Severini answered this question for all Boolean Constraint Satisfaction Problems (CSPs): For 0-Valid-SAT, 1-Valid-SAT, 2-SAT, Horn-SAT, and Dual Horn-SAT, classical satisfiability and operator satisfiability is the same and thus there is no gap; for all other Boolean CSPs, these notions differ as there are gaps, i.e., there are unsatisfiable instances that are satisfiable via operators on Hilbert spaces. We generalize their result to CSPs on arbitrary finite domains and give an almost complete classification: First, we show that NP-hard CSPs admit a separation between classical satisfiability and satisfiability via operators on finite- and infinite-dimensional Hilbert spaces. Second, we show that tractable CSPs of bounded width have no satisfiability gaps of any kind. Finally, we show that tractable CSPs of unbounded width can simulate, in a satisfiability-gap-preserving fashion, linear equations over an Abelian group of prime order p; for such CSPs, we obtain a separation of classical satisfiability and satisfiability via operators on infinite-dimensional Hilbert spaces. Furthermore, if p = 2, such CSPs also have gaps separating classical satisfiability and satisfiability via operators on finite- and infinite-dimensional Hilbert spaces.
Cite as

Andrei A. Bulatov and Stanislav Živný. Satisfiability of Commutative vs. Non-Commutative CSPs. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 37:1-37:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{bulatov_et_al:LIPIcs.ICALP.2025.37,
  author =	{Bulatov, Andrei A. and \v{Z}ivn\'{y}, Stanislav},
  title =	{{Satisfiability of Commutative vs. Non-Commutative CSPs}},
  booktitle =	{52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
  pages =	{37:1--37:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-372-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{334},
  editor =	{Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.37},
  URN =		{urn:nbn:de:0030-drops-234149},
  doi =		{10.4230/LIPIcs.ICALP.2025.37},
  annote =	{Keywords: constraint satisfaction, quantum CSP, operator CSP}
}
Document
DOI: 10.4230/LIPIcs.SoCG.2025.10
Steinhaus Filtration and Stable Paths in the Mapper

Authors: Dustin L. Arendt, Matthew Broussard, Bala Krishnamoorthy, Nathaniel Saul, and Amber Thrall

Published in: LIPIcs, Volume 332, 41st International Symposium on Computational Geometry (SoCG 2025)

Abstract
We define a new filtration called the Steinhaus filtration built from a single cover based on a generalized Steinhaus distance, a generalization of Jaccard distance. The homology persistence module of a Steinhaus filtration with infinitely many cover elements may not be q-tame, even when the covers are in a totally bounded space. While this may pose a challenge to derive stability results, we show that the Steinhaus filtration is stable when the cover is finite. We show that while the Čech and Steinhaus filtrations are not isomorphic in general, they are isomorphic for a finite point set in dimension one. Furthermore, the VR filtration completely determines the 1-skeleton of the Steinhaus filtration in arbitrary dimension. We then develop a language and theory for stable paths within the Steinhaus filtration. We demonstrate how the framework can be applied to several applications where a standard metric may not be defined but a cover is readily available. We introduce a new perspective for modeling recommendation system datasets. As an example, we look at a movies dataset and we find the stable paths identified in our framework represent a sequence of movies constituting a gentle transition and ordering from one genre to another. For explainable machine learning, we apply the Mapper algorithm for model induction by building a filtration from a single Mapper complex, and provide explanations in the form of stable paths between subpopulations. For illustration, we build a Mapper complex from a supervised machine learning model trained on the FashionMNIST dataset. Stable paths in the Steinhaus filtration provide improved explanations of relationships between subpopulations of images.
Cite as

Dustin L. Arendt, Matthew Broussard, Bala Krishnamoorthy, Nathaniel Saul, and Amber Thrall. Steinhaus Filtration and Stable Paths in the Mapper. In 41st International Symposium on Computational Geometry (SoCG 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 332, pp. 10:1-10:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{arendt_et_al:LIPIcs.SoCG.2025.10,
  author =	{Arendt, Dustin L. and Broussard, Matthew and Krishnamoorthy, Bala and Saul, Nathaniel and Thrall, Amber},
  title =	{{Steinhaus Filtration and Stable Paths in the Mapper}},
  booktitle =	{41st International Symposium on Computational Geometry (SoCG 2025)},
  pages =	{10:1--10:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-370-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{332},
  editor =	{Aichholzer, Oswin and Wang, Haitao},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2025.10},
  URN =		{urn:nbn:de:0030-drops-231625},
  doi =		{10.4230/LIPIcs.SoCG.2025.10},
  annote =	{Keywords: Cover and nerve, Jaccard distance, persistence stability, Mapper, recommender systems, explainable machine learning}
}
Document
DOI: 10.4230/LIPIcs.SoCG.2025.29
Sparsification of the Generalized Persistence Diagrams for Scalability Through Gradient Descent

Authors: Mathieu Carrière, Seunghyun Kim, and Woojin Kim

Published in: LIPIcs, Volume 332, 41st International Symposium on Computational Geometry (SoCG 2025)

Abstract
The generalized persistence diagram (GPD) is a natural extension of the classical persistence barcode to the setting of multi-parameter persistence and beyond. The GPD is defined as an integer-valued function whose domain is the set of intervals in the indexing poset of a persistence module, and is known to be able to capture richer topological information than its single-parameter counterpart. However, computing the GPD is computationally prohibitive due to the sheer size of the interval set. Restricting the GPD to a subset of intervals provides a way to manage this complexity, compromising discriminating power to some extent. However, identifying and computing an effective restriction of the domain that minimizes the loss of discriminating power remains an open challenge. In this work, we introduce a novel method for optimizing the domain of the GPD through gradient descent optimization. To achieve this, we introduce a loss function tailored to optimize the selection of intervals, balancing computational efficiency and discriminative accuracy. The design of the loss function is based on the known erosion stability property of the GPD. We showcase the efficiency of our sparsification method for dataset classification in supervised machine learning. Experimental results demonstrate that our sparsification method significantly reduces the time required for computing the GPDs associated to several datasets, while maintaining classification accuracies comparable to those achieved using full GPDs. Our method thus opens the way for the use of GPD-based methods to applications at an unprecedented scale.
Cite as

Mathieu Carrière, Seunghyun Kim, and Woojin Kim. Sparsification of the Generalized Persistence Diagrams for Scalability Through Gradient Descent. In 41st International Symposium on Computational Geometry (SoCG 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 332, pp. 29:1-29:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{carriere_et_al:LIPIcs.SoCG.2025.29,
  author =	{Carri\`{e}re, Mathieu and Kim, Seunghyun and Kim, Woojin},
  title =	{{Sparsification of the Generalized Persistence Diagrams for Scalability Through Gradient Descent}},
  booktitle =	{41st International Symposium on Computational Geometry (SoCG 2025)},
  pages =	{29:1--29:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-370-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{332},
  editor =	{Aichholzer, Oswin and Wang, Haitao},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2025.29},
  URN =		{urn:nbn:de:0030-drops-231810},
  doi =		{10.4230/LIPIcs.SoCG.2025.29},
  annote =	{Keywords: Multi-parameter persistent homology, Generalized persistence diagram, Generalized rank invariant, Non-convex optimization, Gradient descent}
}
Document
DOI: 10.4230/LIPIcs.ITCS.2025.84
Quantum Communication Complexity of Classical Auctions

Authors: Aviad Rubinstein and Zixin Zhou

Published in: LIPIcs, Volume 325, 16th Innovations in Theoretical Computer Science Conference (ITCS 2025)

Abstract
We study the fundamental, classical mechanism design problem of single-buyer multi-item Bayesian revenue-maximizing auctions under the lens of communication complexity between the buyer and the seller. Specifically, we ask whether using quantum communication can be more efficient than classical communication. We have two sets of results, revealing a surprisingly rich landscape - which looks quite different from both quantum communication in non-strategic parties, and classical communication in mechanism design. We first study the expected communication complexity of approximately optimal auctions. We give quantum auction protocols for buyers with unit-demand or combinatorial valuations that obtain an arbitrarily good approximation of the optimal revenue while running in exponentially more efficient communication compared to classical approximately optimal auctions. However, these auctions come with the caveat that they may require the seller to charge exponentially large payments from a deviating buyer. We show that this caveat is necessary - we give an exponential lower bound on the product of the expected quantum communication and the maximum payment. We then study the worst-case communication complexity of exactly optimal auctions in an extremely simple setting: additive buyer’s valuations over two items. We show the following separations: - There exists a prior where the optimal classical auction protocol requires infinitely many bits, but a one-way message of 1 qubit and 2 classical bits suffices. - There exists a prior where no finite one-way quantum auction protocol can obtain the optimal revenue. However, there is a barely-interactive revenue-optimal quantum auction protocol with the following simple structure: the seller prepares a pair of qubits in the EPR state, sends one of them to the buyer, and then the buyer sends 1 qubit and 2 classical bits. - There exists a prior where no multi-round quantum auction protocol with a finite bound on communication complexity can obtain the optimal revenue.
Cite as

Aviad Rubinstein and Zixin Zhou. Quantum Communication Complexity of Classical Auctions. In 16th Innovations in Theoretical Computer Science Conference (ITCS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 325, pp. 84:1-84:27, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{rubinstein_et_al:LIPIcs.ITCS.2025.84,
  author =	{Rubinstein, Aviad and Zhou, Zixin},
  title =	{{Quantum Communication Complexity of Classical Auctions}},
  booktitle =	{16th Innovations in Theoretical Computer Science Conference (ITCS 2025)},
  pages =	{84:1--84:27},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-361-4},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{325},
  editor =	{Meka, Raghu},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2025.84},
  URN =		{urn:nbn:de:0030-drops-227124},
  doi =		{10.4230/LIPIcs.ITCS.2025.84},
  annote =	{Keywords: Mechanism design, Communication complexity, Quantum computing}
}
Document
DOI: 10.4230/LIPIcs.SoCG.2024.70
Strange Random Topology of the Circle

Authors: Uzu Lim

Published in: LIPIcs, Volume 293, 40th International Symposium on Computational Geometry (SoCG 2024)

Abstract
A paradigm in topological data analysis asserts that persistent homology should be computed to recover the homology of a data manifold. But could there be more to persistent homology? In this paper I bound probabilities that a random m Čech complex built on a circle attains high-dimensional topology. This builds on the known result that any nerve complex of circular arcs has the homotopy type of a bouquet of spheres. We observe a phase transition going from one 1-sphere, bouquet of 2-spheres, one 3-sphere, bouquet of 4-spheres, and so on. Furthermore, the even-dimensional Betti numbers become arbitrarily large over shrinking intervals. Our main tool is an exact computation of the expected Euler characteristic, combined with constraints on homotopy types. The systematic behaviour we observe cannot be regarded as a "topological noise", and calls for deeper investigations from the TDA community.
Cite as

Uzu Lim. Strange Random Topology of the Circle. In 40th International Symposium on Computational Geometry (SoCG 2024). Leibniz International Proceedings in Informatics (LIPIcs), Volume 293, pp. 70:1-70:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2024)

Copy BibTex To Clipboard

@InProceedings{lim:LIPIcs.SoCG.2024.70,
  author =	{Lim, Uzu},
  title =	{{Strange Random Topology of the Circle}},
  booktitle =	{40th International Symposium on Computational Geometry (SoCG 2024)},
  pages =	{70:1--70:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-316-4},
  ISSN =	{1868-8969},
  year =	{2024},
  volume =	{293},
  editor =	{Mulzer, Wolfgang and Phillips, Jeff M.},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2024.70},
  URN =		{urn:nbn:de:0030-drops-200150},
  doi =		{10.4230/LIPIcs.SoCG.2024.70},
  annote =	{Keywords: Topological data analysis, persistent homology, stochastic topology}
}
  • Refine by Type
  • 18 Document/PDF
  • 14 Document/HTML

  • Refine by Publication Year
  • 7 2026
  • 7 2025
  • 2 2024
  • 1 2020
  • 1 2018

  • Refine by Author
  • 2 Adams, Henry
  • 2 Majhi, Sushovan
  • 2 Oudot, Steve
  • 2 Wang, Bei
  • 1 Adamaszek, Michal
  • Show More...

  • Refine by Series/Journal
  • 18 LIPIcs

  • Refine by Classification
  • 8 Mathematics of computing → Algebraic topology
  • 3 Theory of computation → Computational geometry
  • 2 Mathematics of computing → Topology
  • 1 Applied computing → Chemistry
  • 1 Computing methodologies → Discrete space search
  • Show More...

  • Refine by Keyword
  • 3 Vietoris-Rips complex
  • 3 persistent homology
  • 2 Topological Data Analysis
  • 1 BWT
  • 1 Borsuk-Ulam theorem
  • Show More...

Any Issues?
X

Feedback on the Current Page

CAPTCHA

Thanks for your feedback!

Feedback submitted to Dagstuhl Publishing

Could not send message

Please try again later or send an E-mail
© 2023-2026 Schloss Dagstuhl – LZI GmbH Schloss Dagstuhl – LZI GmbH About DROPS Imprint Privacy Contact