29 Search Results for "Hagerup, Torben"

Document
DOI: 10.4230/LIPIcs.SEA.2026.7
From Relative Compression to Hierarchical Compression

Authors: Philip Bille, Inge Li Gørtz, and Máximo Pérez-López

Published in: LIPIcs, Volume 371, 24th International Symposium on Experimental Algorithms (SEA 2026)

Abstract
We introduce a framework to use any relative compression algorithm as a subroutine for hierarchical relative compression. In a dataset consisting of n sequences, it consists of constructing a rooted tree on the sequences, using hashing and similarity techniques, and compressing the children of a node relative to their parent. We build up on previous techniques [Bille et al., 2023], and optimize them further for computational efficiency. We test our framework with three existing relative compression algorithms on six genomic datasets, and we show that in datasets that contain heterogeneous data, hierarchical relative compression improves the compression ratio by a factor 2 or more, when compared to relative compression to a single sequence. Apart from compression ratio, we also explore the trade-offs with respect to compression speed, dataset decompression speed, and average sequence decompression speed. With two of the surveyed algorithms, dataset decompression becomes faster and sequence decompression remains practical, at the cost of compression time, which remains competitive for the datasets with highest variability.
Cite as

Philip Bille, Inge Li Gørtz, and Máximo Pérez-López. From Relative Compression to Hierarchical Compression. In 24th International Symposium on Experimental Algorithms (SEA 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 371, pp. 7:1-7:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{bille_et_al:LIPIcs.SEA.2026.7,
  author =	{Bille, Philip and G{\o}rtz, Inge Li and P\'{e}rez-L\'{o}pez, M\'{a}ximo},
  title =	{{From Relative Compression to Hierarchical Compression}},
  booktitle =	{24th International Symposium on Experimental Algorithms (SEA 2026)},
  pages =	{7:1--7:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-422-2},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{371},
  editor =	{Aum\"{u}ller, Martin and Finocchi, Irene},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SEA.2026.7},
  URN =		{urn:nbn:de:0030-drops-260117},
  doi =		{10.4230/LIPIcs.SEA.2026.7},
  annote =	{Keywords: Relative compression, RLZ, string collections, compressed representation, data structures, efficient algorithms}
}
Document
DOI: 10.4230/LIPIcs.SEA.2026.16
Efficient Large-Scale Text Precompression via Approximate LZ77 Parsings

Authors: Patrick Dinklage

Published in: LIPIcs, Volume 371, 24th International Symposium on Experimental Algorithms (SEA 2026)

Abstract
The LZ77 [Lempel and Ziv, 1977] compression scheme is ubiquitous: it lies at the core of everyday general-purpose standard compressors such as gzip or zstd, but also behind the scenes of many applications such as the compression of payloads transmitted in networks. Computing the exact LZ77 parsing is largely solved in theory: it can be done in sublinear time and space, in compressed space and in external memory, to name but some scenarios. However, these approaches are often impractical for everyday use due to their intensive time or space requirements. Standard compressors tackle this issue by introducing heuristics that go hand in hand with sophisticated encoding schemes to achieve very good compression fast and in small space, however, they only have a local view (e.g., a sliding window) on the input, potentially missing out on long-range repetitions that may be located far apart from one another. In this work, we design and implement - in C++ and leveraging shared-memory parallelism - compression pipelines that first precompress the input using an approximate LZ77 parsing taking care of long-range repetitions. This then serves as an assist to standard compressors for producing a succinct encoding of the remaining short and local repetitions. Similar approaches have been considered by [Kosolobov et al., 2020] and [Nalbach, 2024], respectively using Relative Lempel Ziv [Kuruppu et al. 2010] or the string synchronizing set [Kempa & Kociumaka, 2019]. We fill a gap taking the route via the prefix-free parsing [Boucher et al., 2019], using an intermediate result of [Hong et al., 2023]. On large repetitive inputs of tens of gigabytes, our pipelines are orders of magnitudes faster than the state of the art for computing the exact LZ77 parsing, use space less than the input size and still - despite producing more phrases - achieve the best overall compression in comparison to related work.
Cite as

Patrick Dinklage. Efficient Large-Scale Text Precompression via Approximate LZ77 Parsings. In 24th International Symposium on Experimental Algorithms (SEA 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 371, pp. 16:1-16:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{dinklage:LIPIcs.SEA.2026.16,
  author =	{Dinklage, Patrick},
  title =	{{Efficient Large-Scale Text Precompression via Approximate LZ77 Parsings}},
  booktitle =	{24th International Symposium on Experimental Algorithms (SEA 2026)},
  pages =	{16:1--16:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-422-2},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{371},
  editor =	{Aum\"{u}ller, Martin and Finocchi, Irene},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SEA.2026.16},
  URN =		{urn:nbn:de:0030-drops-260204},
  doi =		{10.4230/LIPIcs.SEA.2026.16},
  annote =	{Keywords: compression, algorithm engineering, parallel computation}
}
Document
DOI: 10.4230/LIPIcs.CPM.2026.3
Computing k-mers in Graphs

Authors: Jarno N. Alanko and Máximo Pérez-López

Published in: LIPIcs, Volume 369, 37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026)

Abstract
We initiate the study of computational problems on k-mers (strings of length k) in labeled graphs. As a starting point, we consider the problem of counting the number of distinct k-mers found on the walks of a graph. We establish that this is #P-hard, even on connected deterministic DAGs. However, in the class of deterministic Wheeler graphs (Gagie, Manzini, and Sirén, TCS 2017), we show that distinct k-mers of such a graph W = (V, E) can be counted using O(|W|k) or O(n⁴ log k) arithmetic operations, where n = |V|, m = |E| and |W| = n+m. The latter result uses a new generalization of the technique of prefix doubling to Wheeler graphs. To generalize our results beyond Wheeler graphs, we discuss ways to transform a graph into a Wheeler graph in a manner that preserves the k-mers. As an application of our k-mer counting algorithms, we construct a representation of the de Bruijn graph of the k-mers that occupies O(n_k + |W|k log(max_{1 ≤ 𝓁 ≤ k} n_𝓁) + σlog m) bits of space, where n_𝓁 is the number of distinct 𝓁-mers in the Wheeler graph, and σ is the size of the alphabet. We show how to construct it in the same time complexity. Given that the Wheeler graph can be exponentially smaller than the de Bruijn graph, for large k this provides a theoretical improvement over previous de Bruijn graph construction methods from graphs, which must spend Ω(k) time per k-mer in the graph.
Cite as

Jarno N. Alanko and Máximo Pérez-López. Computing k-mers in Graphs. In 37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 369, pp. 3:1-3:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{alanko_et_al:LIPIcs.CPM.2026.3,
  author =	{Alanko, Jarno N. and P\'{e}rez-L\'{o}pez, M\'{a}ximo},
  title =	{{Computing k-mers in Graphs}},
  booktitle =	{37th Annual Symposium on Combinatorial Pattern Matching (CPM 2026)},
  pages =	{3:1--3:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-420-8},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{369},
  editor =	{Bille, Philip and Prezza, Nicola},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2026.3},
  URN =		{urn:nbn:de:0030-drops-259294},
  doi =		{10.4230/LIPIcs.CPM.2026.3},
  annote =	{Keywords: Wheeler graph, Wheeler language, de Bruijn graph, graph, k-mer, q-gram, DFA, #P-hard}
}
Document
DOI: 10.4230/LIPIcs.SWAT.2026.7
On the Doubling Dimension and the Perimeter of Geodesically Convex Sets in Fat Polygons

Authors: Mark de Berg, Prosenjit Bose, and Leonidas Theocharous

Published in: LIPIcs, Volume 370, 20th Scandinavian Symposium on Algorithm Theory (SWAT 2026)

Abstract
Many algorithmic problems can be solved (almost) as efficiently in metric spaces of bounded doubling dimension as in Euclidean space. Unfortunately, the metric space defined by points in a simple polygon equipped with the geodesic distance does not necessarily have bounded doubling dimension. We therefore study the doubling dimension of fat polygons, for two well-known fatness definitions. We prove that locally-fat simple polygons do not always have bounded doubling dimension, while any (α,β)-covered polygon does have bounded doubling dimension (even if it has holes). We also study the perimeter of geodesically convex sets in (α,β)-covered polygons (possibly with holes), and show that this perimeter is at most a constant times the Euclidean diameter of the set. Using these two results, we obtain new results for several problems on (α,β)-covered polygons, including an algorithm that computes the closest pair of a set of m points in an (α,β)-covered polygon with n vertices that runs in O(n + mlog n) expected time.
Cite as

Mark de Berg, Prosenjit Bose, and Leonidas Theocharous. On the Doubling Dimension and the Perimeter of Geodesically Convex Sets in Fat Polygons. In 20th Scandinavian Symposium on Algorithm Theory (SWAT 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 370, pp. 7:1-7:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{deberg_et_al:LIPIcs.SWAT.2026.7,
  author =	{de Berg, Mark and Bose, Prosenjit and Theocharous, Leonidas},
  title =	{{On the Doubling Dimension and the Perimeter of Geodesically Convex Sets in Fat Polygons}},
  booktitle =	{20th Scandinavian Symposium on Algorithm Theory (SWAT 2026)},
  pages =	{7:1--7:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-421-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{370},
  editor =	{Fraigniaud, Pierre},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SWAT.2026.7},
  URN =		{urn:nbn:de:0030-drops-260439},
  doi =		{10.4230/LIPIcs.SWAT.2026.7},
  annote =	{Keywords: Fat polygons, doubling dimension}
}
Document
DOI: 10.4230/LIPIcs.SWAT.2026.37
Faster Linear-Space Data Structures for Path Frequency Queries

Authors: Ovidiu Rața

Published in: LIPIcs, Volume 370, 20th Scandinavian Symposium on Algorithm Theory (SWAT 2026)

Abstract
We present linear-space data structures for several frequency queries on trees, namely: path mode, path least frequent element, and path α-minority queries. We present the first linear-space data structures, requiring O(n √{nw}) preprocessing time, that can answer path mode and path least frequent element queries in O(√{n/w}) time. This improves upon the best previously known bound of O(log log n √{n/w}) achieved by Durocher et al. [Durocher et al., 2016] in 2016. For the path α-minority problem, where α is specified at query time, we reduce the query time of the linear-space data structure of Durocher et al. [Durocher et al., 2016] from O(α^{-1}log log n) down to O(α^{-1}) by employing a simple randomized algorithm with a success probability ≥ 1/2. We also present the first linear-space data structure supporting "Path Maximum g-value Color" queries in O(√{n/w}) time, requiring O(n √{nw}) preprocessing time. This general framework encapsulates both path mode and path least frequent element queries. For our data structures, we consider the word-RAM model with w ∈ Ω(log n), where w is the word size in bits.
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Ovidiu Rața. Faster Linear-Space Data Structures for Path Frequency Queries. In 20th Scandinavian Symposium on Algorithm Theory (SWAT 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 370, pp. 37:1-37:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{rata:LIPIcs.SWAT.2026.37,
  author =	{Rața, Ovidiu},
  title =	{{Faster Linear-Space Data Structures for Path Frequency Queries}},
  booktitle =	{20th Scandinavian Symposium on Algorithm Theory (SWAT 2026)},
  pages =	{37:1--37:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-421-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{370},
  editor =	{Fraigniaud, Pierre},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SWAT.2026.37},
  URN =		{urn:nbn:de:0030-drops-260732},
  doi =		{10.4230/LIPIcs.SWAT.2026.37},
  annote =	{Keywords: Data structure, Range query, Mode, Minority, Least frequent element, Trees, Linear-space, Path query}
}
Document
DOI: 10.4230/LIPIcs.SoCG.2026.42
Compressed Data Structures for Heegaard Splitting

Authors: Henrique Ennes and Clément Maria

Published in: LIPIcs, Volume 367, 42nd International Symposium on Computational Geometry (SoCG 2026)

Abstract
Heegaard splittings provide a natural representation of closed 3-manifolds by gluing handlebodies along a common surface. These splittings can be equivalently given by two finite sets of meridians lying on the surface, which define a Heegaard diagram. We present a data structure to effectively represent Heegaard diagrams as normal curves with respect to triangulations of a surface of complexity measured by the space required to express the normal coordinates' vectors in binary. This structure can be significantly more compressed than triangulations of 3-manifolds, giving exponential gains for some families. Even with this succinct definition of complexity, we establish polynomial-time algorithms for comparing and manipulating diagrams, performing stabilizations, detecting trivial stabilizations and reductions, and computing topological invariants of the underlying manifolds, such as their fundamental and homology groups. We also contrast early implementations of our techniques with standard software programs for 3-manifolds, achieving faster algorithms for the average cases and exponential gains in speed for some particular presentations of the inputs.
Cite as

Henrique Ennes and Clément Maria. Compressed Data Structures for Heegaard Splitting. In 42nd International Symposium on Computational Geometry (SoCG 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 367, pp. 42:1-42:15, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{ennes_et_al:LIPIcs.SoCG.2026.42,
  author =	{Ennes, Henrique and Maria, Cl\'{e}ment},
  title =	{{Compressed Data Structures for Heegaard Splitting}},
  booktitle =	{42nd International Symposium on Computational Geometry (SoCG 2026)},
  pages =	{42:1--42:15},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-418-5},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{367},
  editor =	{Ahn, Hee-Kap and Hoffmann, Michael and Nayyeri, Amir},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.SoCG.2026.42},
  URN =		{urn:nbn:de:0030-drops-258484},
  doi =		{10.4230/LIPIcs.SoCG.2026.42},
  annote =	{Keywords: 3-manifold, Heegaard splitting, curves on surfaces, surface theory, data structure, computational topology}
}
Document
DOI: 10.4230/LIPIcs.STACS.2026.36
Time-Optimal Construction of String Synchronizing Sets

Authors: Jonas Ellert and Tomasz Kociumaka

Published in: LIPIcs, Volume 364, 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)

Abstract
A powerful design principle behind many modern string algorithms is local consistency: breaking the symmetry between string positions based on their small contexts so that matching fragments are handled consistently. Among the most influential instantiations of this principle are string synchronizing sets [Kempa & Kociumaka; STOC 2019]. A τ-synchronizing set of a string of length n is a set of O(n/τ) string positions, chosen using their length-2τ contexts, such that (outside of highly periodic regions) every block of τ consecutive positions contains at least one element of the set. Synchronizing sets have found dozens of applications in diverse settings, from quantum and dynamic algorithms to fully compressed computation. In the classic word RAM model, particularly for strings over small alphabets, they enabled faster solutions to core problems in data compression, text indexing, and string similarity. In this work, we show that any string T ∈ [0 .. σ)ⁿ can be preprocessed in O(n log σ / log n) time so that, for any given integer τ ∈ [1 .. n], a τ-synchronizing set of T can be constructed in O((n log τ)/(τ log n)) time. Both bounds are optimal in the word RAM model with machine word size w = Θ(log n), matching the information-theoretic minimum for the input and output sizes, respectively. Previously, constructing a τ-synchronizing set required O(n/τ) time after an O(n)-time preprocessing [Kociumaka, Radoszewski, Rytter, and Waleń; SICOMP 2024], or, in the restricted regime of τ < 0.2 log_σ n, without any preprocessing needed [Kempa & Kociumaka; STOC 2019]. A simple instantiation of our method outputs the synchronizing set as a sorted list in O(n/τ) time, or as a bitmask in O(n/log n) time. Our optimal construction produces a compact fully indexable dictionary, supporting select queries in O(1) time and rank queries in O(log ((log τ)/(log log n))) time. The latter complexity matches known unconditional cell-probe lower bounds for τ ≤ n^{1-Ω(1)}. To achieve this, we introduce a general framework for efficiently processing sparse integer sequences via a custom variable-length encoding. We also augment the optimal variant of van Emde Boas trees [Pătraşcu & Thorup; STOC 2006] with a deterministic linear-time construction. When the set is represented as a bitmask under our sparse encoding, the same guarantees for select and rank queries hold after preprocessing in time proportional to the size of our encoding (in words).
Cite as

Jonas Ellert and Tomasz Kociumaka. Time-Optimal Construction of String Synchronizing Sets. In 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 364, pp. 36:1-36:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

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@InProceedings{ellert_et_al:LIPIcs.STACS.2026.36,
  author =	{Ellert, Jonas and Kociumaka, Tomasz},
  title =	{{Time-Optimal Construction of String Synchronizing Sets}},
  booktitle =	{43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)},
  pages =	{36:1--36:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-412-3},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{364},
  editor =	{Mahajan, Meena and Manea, Florin and McIver, Annabelle and Thắng, Nguy\~{ê}n Kim},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2026.36},
  URN =		{urn:nbn:de:0030-drops-255258},
  doi =		{10.4230/LIPIcs.STACS.2026.36},
  annote =	{Keywords: synchronizing sets, local consistency, packed strings}
}
Document
DOI: 10.4230/LIPIcs.OPODIS.2025.14
Optimal-Length Labeling Schemes for Fast Deterministic Communication in Radio Networks

Authors: Adam Ganczorz, Tomasz Jurdzinski, and Andrzej Pelc

Published in: LIPIcs, Volume 361, 29th International Conference on Principles of Distributed Systems (OPODIS 2025)

Abstract
We consider two fundamental communication tasks in arbitrary radio networks: broadcasting (information from one source has to reach all nodes) and gossiping (every node has a message and all messages have to reach all nodes). Nodes are assigned labels that are (not necessarily different) binary strings. Each node knows its own label and can use it as a parameter in the same deterministic algorithm. The length of a labeling scheme is the largest length of a label. The goal is to find labeling schemes of asymptotically optimal length for the above tasks, and to design fast deterministic distributed algorithms for each of them, using labels of optimal length. Our main result concerns broadcasting. We show the existence of a labeling scheme of constant length that supports broadcasting in time O(D+log² n), where D is the diameter of the network and n is the number of nodes. This broadcasting time is an improvement over the best currently known O(Dlog n + log² n) time of broadcasting with constant-length labels, due to Ellen and Gilbert (SPAA 2020). It also matches the optimal broadcasting time in radio networks of known topology. Hence, we show that appropriately chosen node labels of constant length permit to achieve, in a distributed way, the optimal centralized broadcasting time. This is, perhaps, the most surprising finding of this paper. We are able to obtain our result thanks to a novel methodological tool of propagating information in radio networks, that we call a 2-height respecting tree. Next, we apply our broadcasting algorithm to solve the gossiping problem. We get a gossiping algorithm working in time O(D + Δlog n + log² n), using a labeling scheme of optimal length O(log Δ), where Δ is the maximum degree. Our time is the same as the best known gossiping time in radio networks of known topology.
Cite as

Adam Ganczorz, Tomasz Jurdzinski, and Andrzej Pelc. Optimal-Length Labeling Schemes for Fast Deterministic Communication in Radio Networks. In 29th International Conference on Principles of Distributed Systems (OPODIS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 361, pp. 14:1-14:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{ganczorz_et_al:LIPIcs.OPODIS.2025.14,
  author =	{Ganczorz, Adam and Jurdzinski, Tomasz and Pelc, Andrzej},
  title =	{{Optimal-Length Labeling Schemes for Fast Deterministic Communication in Radio Networks}},
  booktitle =	{29th International Conference on Principles of Distributed Systems (OPODIS 2025)},
  pages =	{14:1--14:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-409-3},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{361},
  editor =	{Arusoaie, Andrei and Onica, Emanuel and Spear, Michael and Tucci-Piergiovanni, Sara},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.OPODIS.2025.14},
  URN =		{urn:nbn:de:0030-drops-251874},
  doi =		{10.4230/LIPIcs.OPODIS.2025.14},
  annote =	{Keywords: radio network, distributed algorithms, algorithms with advice, labeling scheme, broadcasting, gossiping}
}
Document
DOI: 10.4230/LIPIcs.FSTTCS.2025.23
Parallel Complexity of Depth-First-Search and Maximal Path in Restricted Graph Classes

Authors: Archit Chauhan, Samir Datta, and M. Praveen

Published in: LIPIcs, Volume 360, 45th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2025)

Abstract
Constructing a Depth First Search (DFS) tree is a fundamental graph problem, whose parallel complexity is still not settled. Reif showed parallel intractability of lex-first DFS. In contrast, randomized parallel algorithms (and more recently, deterministic quasipolynomial parallel algorithms) are known for constructing a DFS tree in general (di)graphs. However a deterministic parallel algorithm for DFS in general graphs remains an elusive goal. Working towards this, a series of works gave deterministic NC algorithms for DFS in planar graphs and digraphs. We further extend these results to more general graph classes, by providing NC algorithms for (di)graphs of bounded genus, and for undirected H-minor-free graphs where H is a fixed graph with at most one crossing. For the case of (di)graphs of bounded treewidth, we further improve the complexity to a Logspace bound. Constructing a maximal path is a simpler problem (that reduces to DFS) for which no deterministic parallel bounds are known for general graphs. For planar graphs a bound of O(log n) parallel time on a CRCW PRAM (thus in NC²) is known. We improve this bound to Logspace.
Cite as

Archit Chauhan, Samir Datta, and M. Praveen. Parallel Complexity of Depth-First-Search and Maximal Path in Restricted Graph Classes. In 45th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 360, pp. 23:1-23:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{chauhan_et_al:LIPIcs.FSTTCS.2025.23,
  author =	{Chauhan, Archit and Datta, Samir and Praveen, M.},
  title =	{{Parallel Complexity of Depth-First-Search and Maximal Path in Restricted Graph Classes}},
  booktitle =	{45th IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science (FSTTCS 2025)},
  pages =	{23:1--23:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-406-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{360},
  editor =	{Aiswarya, C. and Mehta, Ruta and Roy, Subhajit},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.FSTTCS.2025.23},
  URN =		{urn:nbn:de:0030-drops-251041},
  doi =		{10.4230/LIPIcs.FSTTCS.2025.23},
  annote =	{Keywords: Parallel Complexity, Graph Algorithms, Depth First Search, Maximal Path, Planar Graphs, Minor-Free, Treewidth, Logspace}
}
Document
DOI: 10.4230/LIPIcs.ISAAC.2025.29
Space-Efficient Depth-First Search via Augmented Succinct Graph Encodings

Authors: Michael Elberfeld, Frank Kammer, and Johannes Meintrup

Published in: LIPIcs, Volume 359, 36th International Symposium on Algorithms and Computation (ISAAC 2025)

Abstract
We call a graph G separable if a balanced separator can be computed for G of size O(n^ε) with ε < 1. Many real-world graphs are separable such as graphs of bounded genus, graphs of constant treewidth, and graphs excluding a fixed minor. In particular, the well-known planar graphs are separable. We present a succinct encoding of separable graphs G such that, after the encoding is computed, any number of depth-first searches (DFS) can be performed from any given start vertex, each in o(n) time and o(n) bits in the word RAM model. After the execution of a DFS, the succinct encoding of G is augmented such that the DFS tree is encoded inside the encoding while maintaining succinctness. Afterward, the encoding provides common DFS-related queries in constant time. These queries include queries such as lowest-common ancestor of two given vertices in the DFS tree or queries that output the lowpoint of a given vertex in the DFS tree. Furthermore, for planar graphs, we show that the succinct encoding can be computed in O(n) bits and expected linear time, and a compact variant can be constructed in O(n) time and bits. For other separable graph classes 𝒢 the runtime and space usage depends on the specific algorithms used to find balanced separators in graphs of 𝒢.
Cite as

Michael Elberfeld, Frank Kammer, and Johannes Meintrup. Space-Efficient Depth-First Search via Augmented Succinct Graph Encodings. In 36th International Symposium on Algorithms and Computation (ISAAC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 359, pp. 29:1-29:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{elberfeld_et_al:LIPIcs.ISAAC.2025.29,
  author =	{Elberfeld, Michael and Kammer, Frank and Meintrup, Johannes},
  title =	{{Space-Efficient Depth-First Search via Augmented Succinct Graph Encodings}},
  booktitle =	{36th International Symposium on Algorithms and Computation (ISAAC 2025)},
  pages =	{29:1--29:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-408-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{359},
  editor =	{Chen, Ho-Lin and Hon, Wing-Kai and Tsai, Meng-Tsung},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2025.29},
  URN =		{urn:nbn:de:0030-drops-249379},
  doi =		{10.4230/LIPIcs.ISAAC.2025.29},
  annote =	{Keywords: Depth-First Search, Succinct, Space Efficient, Separable Graphs, Planar Graphs, Table Lookup, r-Division}
}
Document
Brief Announcement
DOI: 10.4230/LIPIcs.DISC.2025.58
Brief Announcement: Optimal-Length Labeling Schemes for Fast Deterministic Communication in Radio Networks

Authors: Adam Ganczorz, Tomasz Jurdzinski, and Andrzej Pelc

Published in: LIPIcs, Volume 356, 39th International Symposium on Distributed Computing (DISC 2025)

Abstract
We consider two fundamental communication tasks in arbitrary radio networks: broadcasting (information from one source has to reach all nodes) and gossiping (every node has a message and all messages have to reach all nodes). Nodes are assigned labels that are (not necessarily different) binary strings. Each node knows its own label and can use it as a parameter in the same deterministic algorithm. The length of a labeling scheme is the largest length of a label. The goal is to find labeling schemes of asymptotically optimal length for the above tasks, and to design fast deterministic distributed algorithms for each of them, using labels of optimal length. Our main result concerns broadcasting. We show the existence of a labeling scheme of constant length that supports broadcasting in time O(D+log² n), where D is the diameter of the network and n is the number of nodes. This broadcasting time is an improvement over the best currently known O(Dlog n + log² n) time of broadcasting with constant-length labels, due to Ellen and Gilbert (SPAA 2020). It also matches the optimal broadcasting time in radio networks of known topology. Hence, we show that appropriately chosen node labels of constant length permit to achieve, in a distributed way, the optimal centralized broadcasting time. This is, perhaps, the most surprising finding of this paper. We are able to obtain our result thanks to a novel methodological tool of propagating information in radio networks, that we call a 2-height respecting tree. Next, we apply our broadcasting algorithm to solve the gossiping problem. We get a gossiping algorithm working in time O(D + Δlog n + log² n), using a labeling scheme of optimal length O(log Δ), where Δ is the maximum degree. Our time is the same as the best known gossiping time in radio networks of known topology.
Cite as

Adam Ganczorz, Tomasz Jurdzinski, and Andrzej Pelc. Brief Announcement: Optimal-Length Labeling Schemes for Fast Deterministic Communication in Radio Networks. In 39th International Symposium on Distributed Computing (DISC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 356, pp. 58:1-58:8, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{ganczorz_et_al:LIPIcs.DISC.2025.58,
  author =	{Ganczorz, Adam and Jurdzinski, Tomasz and Pelc, Andrzej},
  title =	{{Brief Announcement: Optimal-Length Labeling Schemes for Fast Deterministic Communication in Radio Networks}},
  booktitle =	{39th International Symposium on Distributed Computing (DISC 2025)},
  pages =	{58:1--58:8},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-402-4},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{356},
  editor =	{Kowalski, Dariusz R.},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.DISC.2025.58},
  URN =		{urn:nbn:de:0030-drops-248744},
  doi =		{10.4230/LIPIcs.DISC.2025.58},
  annote =	{Keywords: radio network, distributed algorithms, algorithms with advice, labeling scheme, broadcasting, gossiping}
}
Document
DOI: 10.4230/LIPIcs.ESA.2025.11
Courcelle’s Theorem for Lipschitz Continuity

Authors: Tatsuya Gima, Soh Kumabe, and Yuichi Yoshida

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)

Abstract
Lipschitz continuity of algorithms, introduced by Kumabe and Yoshida (FOCS'23), measures the stability of an algorithm against small input perturbations. Algorithms with small Lipschitz continuity are desirable, as they ensure reliable decision-making and reproducible scientific research. Several studies have proposed Lipschitz continuous algorithms for various combinatorial optimization problems, but these algorithms are problem-specific, requiring a separate design for each problem. To address this issue, we provide the first algorithmic meta-theorem in the field of Lipschitz continuous algorithms. Our result can be seen as a Lipschitz continuous analogue of Courcelle’s theorem, which offers Lipschitz continuous algorithms for problems on bounded-treewidth graphs. Specifically, we consider the problem of finding a vertex set in a graph that maximizes or minimizes the total weight, subject to constraints expressed in monadic second-order logic (MSO₂). We show that for any ε > 0, there exists a (1±ε)-approximation algorithm for the problem with a polylogarithmic Lipschitz constant on bounded treewidth graphs. On such graphs, our result outperforms most existing Lipschitz continuous algorithms in terms of approximability and/or Lipschitz continuity. Further, we provide similar results for problems on bounded-clique-width graphs subject to constraints expressed in MSO₁. Additionally, we construct a Lipschitz continuous version of Baker’s decomposition using our meta-theorem as a subroutine.
Cite as

Tatsuya Gima, Soh Kumabe, and Yuichi Yoshida. Courcelle’s Theorem for Lipschitz Continuity. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 11:1-11:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{gima_et_al:LIPIcs.ESA.2025.11,
  author =	{Gima, Tatsuya and Kumabe, Soh and Yoshida, Yuichi},
  title =	{{Courcelle’s Theorem for Lipschitz Continuity}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{11:1--11:14},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.11},
  URN =		{urn:nbn:de:0030-drops-244793},
  doi =		{10.4230/LIPIcs.ESA.2025.11},
  annote =	{Keywords: Fixed-Parameter Tractability, Algorithmic Meta-Theorem, Lipschitz Continuity}
}
Document
DOI: 10.4230/LIPIcs.ESA.2025.5
External-Memory Priority Queues with Optimal Insertions

Authors: Gerth Stølting Brodal, Michael T. Goodrich, John Iacono, Jared Lo, Ulrich Meyer, Victor Pagan, Nodari Sitchinava, and Rolf Svenning

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)

Abstract
We present an external-memory priority queue structure supporting Insert and DeleteMin with amortized 𝒪(1) and 𝒪(lg N) comparisons, respectively, and amortized 𝒪(1/B) and 𝒪(1/B log_{M/B} N/B) I/Os, respectively. Here, M is the size of the internal memory, B is the block size of I/Os between internal and external memory, and N is the number of elements in the priority queue just before an operation is performed. Previous external-memory priority queues required amortized 𝒪(lg N) comparisons and 𝒪(1/B log_{M/B} N/B) I/Os for both Insert and DeleteMin. The construction requires the minimal assumption M ≥ 2B.
Cite as

Gerth Stølting Brodal, Michael T. Goodrich, John Iacono, Jared Lo, Ulrich Meyer, Victor Pagan, Nodari Sitchinava, and Rolf Svenning. External-Memory Priority Queues with Optimal Insertions. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 5:1-5:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{brodal_et_al:LIPIcs.ESA.2025.5,
  author =	{Brodal, Gerth St{\o}lting and Goodrich, Michael T. and Iacono, John and Lo, Jared and Meyer, Ulrich and Pagan, Victor and Sitchinava, Nodari and Svenning, Rolf},
  title =	{{External-Memory Priority Queues with Optimal Insertions}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{5:1--5:14},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.5},
  URN =		{urn:nbn:de:0030-drops-244734},
  doi =		{10.4230/LIPIcs.ESA.2025.5},
  annote =	{Keywords: priority queues, external memory, cache aware, amortized complexity}
}
Document
DOI: 10.4230/LIPIcs.ESA.2025.109
Combined Search and Encoding for Seeds, with an Application to Minimal Perfect Hashing

Authors: Hans-Peter Lehmann, Peter Sanders, Stefan Walzer, and Jonatan Ziegler

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)

Abstract
Randomised algorithms often employ methods that can fail and that are retried with independent randomness until they succeed. Randomised data structures therefore often store indices of successful attempts, called seeds. If n such seeds are required (e.g., for independent substructures) the standard approach is to compute for each i ∈ [n] the smallest successful seed S_i and store S = (S_1,…,S_n). The central observation of this paper is that this is not space-optimal. We present a different algorithm that computes a sequence S' = (S_1',…,S_n') of successful seeds such that the entropy of S' undercuts the entropy of S by Ω(n) bits in most cases. To achieve a memory consumption of OPT+εn, the expected number of inspected seeds increases by a factor of 𝒪(1/ε). We demonstrate the usefulness of our findings with a novel construction for minimal perfect hash functions that, for n keys and any ε ∈ [n^{-3/7},1], has space requirement (1+ε)OPT and construction time 𝒪(n/ε). All previous approaches only support ε = ω(1/log n) or have construction times that increase exponentially with 1/ε. Our implementation beats the construction throughput of the state of the art by more than two orders of magnitude for ε ≤ 3%.
Cite as

Hans-Peter Lehmann, Peter Sanders, Stefan Walzer, and Jonatan Ziegler. Combined Search and Encoding for Seeds, with an Application to Minimal Perfect Hashing. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 109:1-109:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{lehmann_et_al:LIPIcs.ESA.2025.109,
  author =	{Lehmann, Hans-Peter and Sanders, Peter and Walzer, Stefan and Ziegler, Jonatan},
  title =	{{Combined Search and Encoding for Seeds, with an Application to Minimal Perfect Hashing}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{109:1--109:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.109},
  URN =		{urn:nbn:de:0030-drops-245780},
  doi =		{10.4230/LIPIcs.ESA.2025.109},
  annote =	{Keywords: Random Seed, Encoding, Bernoulli Process, Backtracking, Perfect Hashing}
}
Document
DOI: 10.4230/LIPIcs.MFCS.2025.8
Dynamic Membership for Regular Tree Languages

Authors: Antoine Amarilli, Corentin Barloy, Louis Jachiet, and Charles Paperman

Published in: LIPIcs, Volume 345, 50th International Symposium on Mathematical Foundations of Computer Science (MFCS 2025)

Abstract
We study the dynamic membership problem for regular tree languages under relabeling updates: we fix an alphabet Σ and a regular tree language L over Σ (expressed, e.g., as a tree automaton), we are given a tree T with labels in Σ, and we must maintain the information of whether the tree T belongs to L while handling relabeling updates that change the labels of individual nodes in T. Our first contribution is to show that this problem admits an O(log n / log log n) algorithm for any fixed regular tree language, improving over known O(log n) algorithms. This generalizes the known O(log n / log log n) upper bound over words, and it matches the lower bound of Ω(log n / log log n) from dynamic membership to some word languages and from the existential marked ancestor problem. Our second contribution is to introduce a class of regular languages, dubbed almost-commutative tree languages, and show that dynamic membership to such languages under relabeling updates can be decided in constant time per update. Almost-commutative languages generalize both commutative languages and finite languages: they are the analogue for trees of the ZG languages enjoying constant-time dynamic membership over words. Our main technical contribution is to show that this class is conditionally optimal when we assume that the alphabet features a neutral letter, i.e., a letter that has no effect on membership to the language. More precisely, we show that any regular tree language with a neutral letter which is not almost-commutative cannot be maintained in constant time under the assumption that the prefix-U1 problem from [Antoine Amarilli et al., 2021] also does not admit a constant-time algorithm.
Cite as

Antoine Amarilli, Corentin Barloy, Louis Jachiet, and Charles Paperman. Dynamic Membership for Regular Tree Languages. In 50th International Symposium on Mathematical Foundations of Computer Science (MFCS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 345, pp. 8:1-8:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

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@InProceedings{amarilli_et_al:LIPIcs.MFCS.2025.8,
  author =	{Amarilli, Antoine and Barloy, Corentin and Jachiet, Louis and Paperman, Charles},
  title =	{{Dynamic Membership for Regular Tree Languages}},
  booktitle =	{50th International Symposium on Mathematical Foundations of Computer Science (MFCS 2025)},
  pages =	{8:1--8:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-388-1},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{345},
  editor =	{Gawrychowski, Pawe{\l} and Mazowiecki, Filip and Skrzypczak, Micha{\l}},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.MFCS.2025.8},
  URN =		{urn:nbn:de:0030-drops-241155},
  doi =		{10.4230/LIPIcs.MFCS.2025.8},
  annote =	{Keywords: automaton, dynamic membership, incremental maintenance, forest algebra}
}
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