91 Search Results for "Kakimura, Naonori"

Volume

LIPIcs, Volume 283

34th International Symposium on Algorithms and Computation (ISAAC 2023)

ISAAC 2023, December 3-6, 2023, Kyoto, Japan

Editors: Satoru Iwata and Naonori Kakimura

Document
DOI: 10.4230/LIPIcs.STACS.2026.33
Higher Hardness Results for the Reconfiguration of Odd Matchings

Authors: Joseph Dorfer

Published in: LIPIcs, Volume 364, 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)

Abstract
We study the reconfiguration of odd matchings of combinatorial graphs. Odd matchings are matchings that cover all but one vertex of a graph. A reconfiguration step, or flip, is an operation that matches the isolated vertex and, consequently, isolates another vertex. The flip graph of odd matchings is a graph that has all odd matchings of a graph as vertices and an edge between two vertices if their corresponding matchings can be transformed into one another via a single flip. We show that computing the diameter of the flip graph of odd matchings is Π₂^p-hard. This complements a recent result by Wulf [FOCS25] that it is Π₂^p-hard to compute the diameter of the flip graph of perfect matchings where a flip swaps matching edges along a single cycle of unbounded size. Further, we show that computing the radius of the flip graph of odd matchings is Σ₃^p-hard. The respective decision problems for the diameter and the radius are also complete in the respective level of the polynomial hierarchy. This shows that computing the radius of the flip graph of odd matchings is provably harder than computing its diameter, unless the polynomial hierarchy collapses. Finally, we reduce set cover to the problem of finding shortest flip sequences. As a consequence, we show APX-hardness and that the problem cannot be approximated by a sublogarithmic factor. By doing so, we answer a question asked by Aichholzer, Brenner, Dorfer, Hoang, Perz, Rieck, and Verciani [GD25].
Cite as

Joseph Dorfer. Higher Hardness Results for the Reconfiguration of Odd Matchings. In 43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 364, pp. 33:1-33:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

Copy BibTex To Clipboard

@InProceedings{dorfer:LIPIcs.STACS.2026.33,
  author =	{Dorfer, Joseph},
  title =	{{Higher Hardness Results for the Reconfiguration of Odd Matchings}},
  booktitle =	{43rd International Symposium on Theoretical Aspects of Computer Science (STACS 2026)},
  pages =	{33:1--33:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-412-3},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{364},
  editor =	{Mahajan, Meena and Manea, Florin and McIver, Annabelle and Thắng, Nguy\~{ê}n Kim},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2026.33},
  URN =		{urn:nbn:de:0030-drops-255222},
  doi =		{10.4230/LIPIcs.STACS.2026.33},
  annote =	{Keywords: Graph Reconfiguration Problems, Flip Graphs, Polynomial Hierarchy, APX-hardness}
}
Document
DOI: 10.4230/LIPIcs.ITCS.2026.105
Fixed-Parameter Tractable Submodular Maximization over a Matroid

Authors: Shamisa Nematollahi, Adrian Vladu, and Junyao Zhao

Published in: LIPIcs, Volume 362, 17th Innovations in Theoretical Computer Science Conference (ITCS 2026)

Abstract
In this paper, we design fixed-parameter tractable (FPT) algorithms for (non-monotone) submodular maximization subject to a matroid constraint, where the matroid rank r is treated as a fixed parameter that is independent of the total number of elements n. We provide two FPT algorithms: one for the offline setting and another for the random-order streaming setting. Our streaming algorithm achieves a 1/2-ε approximation using Õ(r/poly(ε)) memory, while our offline algorithm obtains a 1-(1)/(e)-ε approximation with n⋅ 2^{Õ(r/poly(ε))} runtime and Õ(r/poly(ε)) memory. Both approximation factors are near-optimal in their respective settings, given existing hardness results. In particular, our offline algorithm demonstrates that - unlike in the polynomial-time regime - there is essentially no separation between monotone and non-monotone submodular maximization under a matroid constraint in the FPT framework.
Cite as

Shamisa Nematollahi, Adrian Vladu, and Junyao Zhao. Fixed-Parameter Tractable Submodular Maximization over a Matroid. In 17th Innovations in Theoretical Computer Science Conference (ITCS 2026). Leibniz International Proceedings in Informatics (LIPIcs), Volume 362, pp. 105:1-105:22, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2026)

Copy BibTex To Clipboard

@InProceedings{nematollahi_et_al:LIPIcs.ITCS.2026.105,
  author =	{Nematollahi, Shamisa and Vladu, Adrian and Zhao, Junyao},
  title =	{{Fixed-Parameter Tractable Submodular Maximization over a Matroid}},
  booktitle =	{17th Innovations in Theoretical Computer Science Conference (ITCS 2026)},
  pages =	{105:1--105:22},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-410-9},
  ISSN =	{1868-8969},
  year =	{2026},
  volume =	{362},
  editor =	{Saraf, Shubhangi},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ITCS.2026.105},
  URN =		{urn:nbn:de:0030-drops-253924},
  doi =		{10.4230/LIPIcs.ITCS.2026.105},
  annote =	{Keywords: Submodular maximization, matroids, parameterized complexity, streaming algorithms}
}
Document
DOI: 10.4230/LIPIcs.ISAAC.2025.40
Minimum Sum Coloring with Bundles in Trees and Bipartite Graphs

Authors: Takehiro Ito, Naonori Kakimura, Naoyuki Kamiyama, Yusuke Kobayashi, and Yoshio Okamoto

Published in: LIPIcs, Volume 359, 36th International Symposium on Algorithms and Computation (ISAAC 2025)

Abstract
The minimum sum coloring problem with bundles was introduced by Darbouy and Friggstad (SWAT 2024) as a common generalization of the minimum coloring problem and the minimum sum coloring problem. During their presentation, the following open problem was raised: whether the minimum sum coloring problem with bundles could be solved in polynomial time for trees. We answer their question in the negative by proving that the minimum sum coloring problem with bundles is NP-hard even for paths. We complement this hardness by providing algorithms of the following types. First, we provide a fixed-parameter algorithm for trees when the number of bundles is a parameter; this can be extended to graphs of bounded treewidth. Second, we provide a polynomial-time algorithm for trees when bundles form a partition of the vertex set and the difference between the number of vertices and the number of bundles is constant. Third, we provide a polynomial-time algorithm for trees when bundles form a partition of the vertex set and each bundle induces a connected subgraph. We further show that for bipartite graphs, the problem with weights is NP-hard even when the number of bundles is at least three, but is polynomial-time solvable when the number of bundles is at most two. The threshold shifts to three versus four for the problem without weights.
Cite as

Takehiro Ito, Naonori Kakimura, Naoyuki Kamiyama, Yusuke Kobayashi, and Yoshio Okamoto. Minimum Sum Coloring with Bundles in Trees and Bipartite Graphs. In 36th International Symposium on Algorithms and Computation (ISAAC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 359, pp. 40:1-40:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{ito_et_al:LIPIcs.ISAAC.2025.40,
  author =	{Ito, Takehiro and Kakimura, Naonori and Kamiyama, Naoyuki and Kobayashi, Yusuke and Okamoto, Yoshio},
  title =	{{Minimum Sum Coloring with Bundles in Trees and Bipartite Graphs}},
  booktitle =	{36th International Symposium on Algorithms and Computation (ISAAC 2025)},
  pages =	{40:1--40:14},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-408-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{359},
  editor =	{Chen, Ho-Lin and Hon, Wing-Kai and Tsai, Meng-Tsung},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2025.40},
  URN =		{urn:nbn:de:0030-drops-249482},
  doi =		{10.4230/LIPIcs.ISAAC.2025.40},
  annote =	{Keywords: graph algorithms, minimum sum coloring, minimum coloring, fixed-parameter tractability, NP-hardness}
}
Document
DOI: 10.4230/LIPIcs.ISAAC.2025.54
Reforming an Unfair Allocation by Exchanging Goods

Authors: Sheung Man Yuen, Ayumi Igarashi, Naoyuki Kamiyama, and Warut Suksompong

Published in: LIPIcs, Volume 359, 36th International Symposium on Algorithms and Computation (ISAAC 2025)

Abstract
Fairly allocating indivisible goods is a frequently occurring task in everyday life. Given an initial allocation of the goods, we consider the problem of reforming it via a sequence of exchanges to attain fairness in the form of envy-freeness up to one good (EF1). We present a vast array of results on the complexity of determining whether it is possible to reach an EF1 allocation from the initial allocation and, if so, the minimum number of exchanges required. In particular, we uncover several distinctions based on the number of agents involved and their utility functions. Furthermore, we derive essentially tight bounds on the worst-case number of exchanges needed to achieve EF1.
Cite as

Sheung Man Yuen, Ayumi Igarashi, Naoyuki Kamiyama, and Warut Suksompong. Reforming an Unfair Allocation by Exchanging Goods. In 36th International Symposium on Algorithms and Computation (ISAAC 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 359, pp. 54:1-54:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{yuen_et_al:LIPIcs.ISAAC.2025.54,
  author =	{Yuen, Sheung Man and Igarashi, Ayumi and Kamiyama, Naoyuki and Suksompong, Warut},
  title =	{{Reforming an Unfair Allocation by Exchanging Goods}},
  booktitle =	{36th International Symposium on Algorithms and Computation (ISAAC 2025)},
  pages =	{54:1--54:21},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-408-6},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{359},
  editor =	{Chen, Ho-Lin and Hon, Wing-Kai and Tsai, Meng-Tsung},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ISAAC.2025.54},
  URN =		{urn:nbn:de:0030-drops-249626},
  doi =		{10.4230/LIPIcs.ISAAC.2025.54},
  annote =	{Keywords: fair division, indivisible goods, envy-freeness, exchanges}
}
Document
DOI: 10.4230/LIPIcs.ESA.2025.57
Improved Hardness-Of-Approximation for Token-Swapping

Authors: Sam Hiken and Nicole Wein

Published in: LIPIcs, Volume 351, 33rd Annual European Symposium on Algorithms (ESA 2025)

Abstract
We study the token swapping problem, in which we are given a graph with an initial assignment of one distinct token to each vertex, and a final desired assignment (again with one token per vertex). The goal is to find the minimum length sequence of swaps of adjacent tokens required to get from the initial to the final assignment. The token swapping problem is known to be NP-complete. It is also known to have a polynomial-time 4-approximation algorithm. From the hardness-of-approximation side, it is known to be NP-hard to approximate with a ratio better than 1001/1000. Our main result is an improvement of the approximation ratio of the lower bound: We show that it is NP-hard to approximate with ratio better than 14/13. We then turn our attention to the 0/1-weighted version, in which every token has a weight of either 0 or 1, and the cost of a swap is the sum of the weights of the two participating tokens. Unlike standard token swapping, no constant-factor approximation is known for this version, and we provide an explanation. We prove that 0/1-weighted token swapping is NP-hard to approximate with ratio better than (1-ε) ln(n) for any constant ε > 0. Lastly, we prove two barrier results for the standard (unweighted) token swapping problem. We show that one cannot beat the current best known approximation ratio of 4 using a large class of algorithms which includes all known algorithms, nor can one beat it using a common analysis framework.
Cite as

Sam Hiken and Nicole Wein. Improved Hardness-Of-Approximation for Token-Swapping. In 33rd Annual European Symposium on Algorithms (ESA 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 351, pp. 57:1-57:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{hiken_et_al:LIPIcs.ESA.2025.57,
  author =	{Hiken, Sam and Wein, Nicole},
  title =	{{Improved Hardness-Of-Approximation for Token-Swapping}},
  booktitle =	{33rd Annual European Symposium on Algorithms (ESA 2025)},
  pages =	{57:1--57:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-395-9},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{351},
  editor =	{Benoit, Anne and Kaplan, Haim and Wild, Sebastian and Herman, Grzegorz},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ESA.2025.57},
  URN =		{urn:nbn:de:0030-drops-245251},
  doi =		{10.4230/LIPIcs.ESA.2025.57},
  annote =	{Keywords: algorithms, token-swapping, hardness-of-approximation, lower-bounds}
}
Document
DOI: 10.4230/LIPIcs.WADS.2025.23
Novel Complexity Results for Temporal Separators with Deadlines

Authors: Riccardo Dondi and Manuel Lafond

Published in: LIPIcs, Volume 349, 19th International Symposium on Algorithms and Data Structures (WADS 2025)

Abstract
We consider two variants, (s,z,𝓁)-Temporal Separator and (s,z,𝓁)-Temporal Cut, respectively, of the vertex separator and the edge cut problem in temporal graphs. The goal is to remove the minimum number of vertices (temporal edges, respectively) in order to delete all the temporal paths that have time travel at most 𝓁 between a source vertex s and target vertex z. First, we solve an open problem in the literature showing that (s,z,𝓁)-Temporal Separator is NP-hard even when the underlying graph has pathwidth bounded by four. We complement this result showing that (s,z,𝓁)-Temporal Separator can be solved in polynomial time for graphs of pathwidth bounded by three. Then we consider the approximability of (s,z,𝓁)-Temporal Separator and we show that it cannot be approximated within factor 2^Ω(log^{1-ε}|V|) for any constant ε > 0, unless NP ⊆ ZPP (V is the vertex set of the input temporal graph) and that the strict version is approximable within factor 𝓁-1 (we show also that it is unliklely that this factor can be improved). Then we consider the (s,z,𝓁)-Temporal Cut problem, we show that it is APX-hard and we present a 2 log₂(2𝓁) approximation algorithm.
Cite as

Riccardo Dondi and Manuel Lafond. Novel Complexity Results for Temporal Separators with Deadlines. In 19th International Symposium on Algorithms and Data Structures (WADS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 349, pp. 23:1-23:14, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{dondi_et_al:LIPIcs.WADS.2025.23,
  author =	{Dondi, Riccardo and Lafond, Manuel},
  title =	{{Novel Complexity Results for Temporal Separators with Deadlines}},
  booktitle =	{19th International Symposium on Algorithms and Data Structures (WADS 2025)},
  pages =	{23:1--23:14},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-398-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{349},
  editor =	{Morin, Pat and Oh, Eunjin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WADS.2025.23},
  URN =		{urn:nbn:de:0030-drops-242545},
  doi =		{10.4230/LIPIcs.WADS.2025.23},
  annote =	{Keywords: Temporal Graphs, Graph Algorithms, Graph Separators, Parameterized Complexity, Approximation Complexity}
}
Document
DOI: 10.4230/LIPIcs.WADS.2025.41
Scheduling on Identical Machines with Setup Time and Unknown Execution Time

Authors: Yasushi Kawase, Kazuhisa Makino, Vinh Long Phan, and Hanna Sumita

Published in: LIPIcs, Volume 349, 19th International Symposium on Algorithms and Data Structures (WADS 2025)

Abstract
In this study, we investigate a scheduling problem on identical machines in which jobs require initial setup before execution. We assume that an algorithm can dynamically form a batch (i.e., a collection of jobs to be processed together) from the remaining jobs. The setup time is modeled as a known monotone function of the set of jobs within a batch, while the execution time of each job remains unknown until completion. This uncertainty poses significant challenges for minimizing the makespan. We address these challenges by considering two scenarios: each job batch must be assigned to a single machine, or a batch may be distributed across multiple machines. For both scenarios, we analyze settings with and without preemption. Across these four settings, we design online algorithms that achieve asymptotically optimal competitive ratios with respect to both the number of jobs and the number of machines.
Cite as

Yasushi Kawase, Kazuhisa Makino, Vinh Long Phan, and Hanna Sumita. Scheduling on Identical Machines with Setup Time and Unknown Execution Time. In 19th International Symposium on Algorithms and Data Structures (WADS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 349, pp. 41:1-41:16, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{kawase_et_al:LIPIcs.WADS.2025.41,
  author =	{Kawase, Yasushi and Makino, Kazuhisa and Phan, Vinh Long and Sumita, Hanna},
  title =	{{Scheduling on Identical Machines with Setup Time and Unknown Execution Time}},
  booktitle =	{19th International Symposium on Algorithms and Data Structures (WADS 2025)},
  pages =	{41:1--41:16},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-398-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{349},
  editor =	{Morin, Pat and Oh, Eunjin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WADS.2025.41},
  URN =		{urn:nbn:de:0030-drops-242728},
  doi =		{10.4230/LIPIcs.WADS.2025.41},
  annote =	{Keywords: Online scheduling, Competitive analysis, Makespan minimization, Identical machines scheduling}
}
Document
DOI: 10.4230/LIPIcs.WADS.2025.50
Deterministic (2/3 - ε)-Approximation of Matroid Intersection Using Nearly-Linear Independence-Oracle Queries

Authors: Tatsuya Terao

Published in: LIPIcs, Volume 349, 19th International Symposium on Algorithms and Data Structures (WADS 2025)

Abstract
In the matroid intersection problem, we are given two matroids ℳ₁ = (V, ℐ₁) and ℳ₂ = (V, ℐ₂) defined on the same ground set V of n elements, and the objective is to find a common independent set S ∈ ℐ₁ ∩ ℐ₂ of largest possible cardinality, denoted by r. In this paper, we consider a deterministic matroid intersection algorithm with only a nearly linear number of independence oracle queries. Our contribution is to present a deterministic O(n/(ε) + r log r)-independence-query (2/3-ε)-approximation algorithm for any ε > 0. Our idea is very simple: we apply a recent Õ(n √r/ε)-independence-query (1 - ε)-approximation algorithm of Blikstad [ICALP 2021], but terminate it before completion. Moreover, we also present a semi-streaming algorithm for (2/3 -ε)-approximation of matroid intersection in O(1/ε) passes.
Cite as

Tatsuya Terao. Deterministic (2/3 - ε)-Approximation of Matroid Intersection Using Nearly-Linear Independence-Oracle Queries. In 19th International Symposium on Algorithms and Data Structures (WADS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 349, pp. 50:1-50:18, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{terao:LIPIcs.WADS.2025.50,
  author =	{Terao, Tatsuya},
  title =	{{Deterministic (2/3 - \epsilon)-Approximation of Matroid Intersection Using Nearly-Linear Independence-Oracle Queries}},
  booktitle =	{19th International Symposium on Algorithms and Data Structures (WADS 2025)},
  pages =	{50:1--50:18},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-398-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{349},
  editor =	{Morin, Pat and Oh, Eunjin},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.WADS.2025.50},
  URN =		{urn:nbn:de:0030-drops-242812},
  doi =		{10.4230/LIPIcs.WADS.2025.50},
  annote =	{Keywords: Matroid intersection, approximation algorithm, streaming algorithm}
}
Document
Research
DOI: 10.4230/OASIcs.Grossi.20
Subsequence-Based Indices for Genome Sequence Analysis

Authors: Giovanni Buzzega, Alessio Conte, Veronica Guerrini, Giulia Punzi, Giovanna Rosone, and Lorenzo Tattini

Published in: OASIcs, Volume 132, From Strings to Graphs, and Back Again: A Festschrift for Roberto Grossi's 60th Birthday (2025)

Abstract
Compact indices are a fundamental tool in string analysis, even more so in bioinformatics, where genomic sequences can reach billions in length. This paper presents some recent results in which Roberto Grossi has been involved, showing how some of these indices do more than just efficiently represent data, but rather are able to bring out salient information within it, which can be exploited for their downstream analysis. Specifically, we first review a recently-introduced method [Guerrini et al., 2023] that employs the Burrows-Wheeler Transform to build reasonably accurate phylogenetic trees in an assembly-free scenario. We then describe a recent practical tool [Buzzega et al., 2025] for indexing Maximal Common Subsequences between strings, which can enable analysis of genomic sequence similarity. Experimentally, we show that the results produced by the one index are consistent with the expectations about the results of the other index.
Cite as

Giovanni Buzzega, Alessio Conte, Veronica Guerrini, Giulia Punzi, Giovanna Rosone, and Lorenzo Tattini. Subsequence-Based Indices for Genome Sequence Analysis. In From Strings to Graphs, and Back Again: A Festschrift for Roberto Grossi's 60th Birthday. Open Access Series in Informatics (OASIcs), Volume 132, pp. 20:1-20:21, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{buzzega_et_al:OASIcs.Grossi.20,
  author =	{Buzzega, Giovanni and Conte, Alessio and Guerrini, Veronica and Punzi, Giulia and Rosone, Giovanna and Tattini, Lorenzo},
  title =	{{Subsequence-Based Indices for Genome Sequence Analysis}},
  booktitle =	{From Strings to Graphs, and Back Again: A Festschrift for Roberto Grossi's 60th Birthday},
  pages =	{20:1--20:21},
  series =	{Open Access Series in Informatics (OASIcs)},
  ISBN =	{978-3-95977-391-1},
  ISSN =	{2190-6807},
  year =	{2025},
  volume =	{132},
  editor =	{Conte, Alessio and Marino, Andrea and Rosone, Giovanna and Vitter, Jeffrey Scott},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/OASIcs.Grossi.20},
  URN =		{urn:nbn:de:0030-drops-238199},
  doi =		{10.4230/OASIcs.Grossi.20},
  annote =	{Keywords: String Indices, Burrows-Wheeler Transform, Maximal Common Subsequences, Sequence Analysis, Phylogeny}
}
Document
Track A: Algorithms, Complexity and Games
DOI: 10.4230/LIPIcs.ICALP.2025.63
Computing Distances on Graph Associahedra Is Fixed-Parameter Tractable

Authors: Luís Felipe I. Cunha, Ignasi Sau, Uéverton S. Souza, and Mario Valencia-Pabon

Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)

Abstract
An elimination tree of a connected graph G is a rooted tree on the vertices of G obtained by choosing a root v and recursing on the connected components of G-v to obtain the subtrees of v. The graph associahedron of G is a polytope whose vertices correspond to elimination trees of G and whose edges correspond to tree rotations, a natural operation between elimination trees. These objects generalize associahedra, which correspond to the case where G is a path. Ito et al. [ICALP 2023] recently proved that the problem of computing distances on graph associahedra is NP-hard. In this paper we prove that the problem, for a general graph G, is fixed-parameter tractable parameterized by the distance k. Prior to our work, only the case where G is a path was known to be fixed-parameter tractable. To prove our result, we use a novel approach based on a marking scheme that restricts the search to a set of vertices whose size is bounded by a (large) function of k.
Cite as

Luís Felipe I. Cunha, Ignasi Sau, Uéverton S. Souza, and Mario Valencia-Pabon. Computing Distances on Graph Associahedra Is Fixed-Parameter Tractable. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 63:1-63:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{cunha_et_al:LIPIcs.ICALP.2025.63,
  author =	{Cunha, Lu{\'\i}s Felipe I. and Sau, Ignasi and Souza, U\'{e}verton S. and Valencia-Pabon, Mario},
  title =	{{Computing Distances on Graph Associahedra Is Fixed-Parameter Tractable}},
  booktitle =	{52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
  pages =	{63:1--63:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-372-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{334},
  editor =	{Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.63},
  URN =		{urn:nbn:de:0030-drops-234408},
  doi =		{10.4230/LIPIcs.ICALP.2025.63},
  annote =	{Keywords: graph associahedra, elimination tree, rotation distance, parameterized complexity, fixed-parameter tractable algorithm, combinatorial shortest path, reconfiguration}
}
Document
Track A: Algorithms, Complexity and Games
DOI: 10.4230/LIPIcs.ICALP.2025.36
Faster Fréchet Distance Under Transformations

Authors: Kevin Buchin, Maike Buchin, Zijin Huang, André Nusser, and Sampson Wong

Published in: LIPIcs, Volume 334, 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)

Abstract
We study the problem of computing the Fréchet distance between two polygonal curves under transformations. First, we consider translations in the Euclidean plane. Given two curves π and σ of total complexity n and a threshold δ ≥ 0, we present an 𝒪̃(n^{7 + 1/3}) time algorithm to determine whether there exists a translation t ∈ ℝ² such that the Fréchet distance between π and σ + t is at most δ. This improves on the previous best result, which is an 𝒪(n⁸) time algorithm. We then generalize this result to any class of rationally parameterized transformations, which includes translation, rotation, scaling, and arbitrary affine transformations. For a class T of rationally parametrized transformations with k degrees of freedom, we show that one can determine whether there is a transformation τ ∈ T such that the Fréchet distance between π and τ(σ) is at most δ in 𝒪̃(n^{3k+4/3}) time.
Cite as

Kevin Buchin, Maike Buchin, Zijin Huang, André Nusser, and Sampson Wong. Faster Fréchet Distance Under Transformations. In 52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 334, pp. 36:1-36:20, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{buchin_et_al:LIPIcs.ICALP.2025.36,
  author =	{Buchin, Kevin and Buchin, Maike and Huang, Zijin and Nusser, Andr\'{e} and Wong, Sampson},
  title =	{{Faster Fr\'{e}chet Distance Under Transformations}},
  booktitle =	{52nd International Colloquium on Automata, Languages, and Programming (ICALP 2025)},
  pages =	{36:1--36:20},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-372-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{334},
  editor =	{Censor-Hillel, Keren and Grandoni, Fabrizio and Ouaknine, Jo\"{e}l and Puppis, Gabriele},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.ICALP.2025.36},
  URN =		{urn:nbn:de:0030-drops-234137},
  doi =		{10.4230/LIPIcs.ICALP.2025.36},
  annote =	{Keywords: Fr\'{e}chet distance, curve similarity, shape matching}
}
Document
DOI: 10.4230/LIPIcs.CPM.2025.15
Encoding Co-Lex Orders of Finite-State Automata in Linear Space

Authors: Ruben Becker, Nicola Cotumaccio, Sung-Hwan Kim, Nicola Prezza, and Carlo Tosoni

Published in: LIPIcs, Volume 331, 36th Annual Symposium on Combinatorial Pattern Matching (CPM 2025)

Abstract
The Burrows-Wheeler transform (BWT) is a string transformation that enhances string indexing and compressibility. Cotumaccio and Prezza [SODA '21] extended this transformation to nondeterministic finite automata (NFAs) through co-lexicographic partial orders, i.e., by sorting the states of an NFA according to the co-lexicographic order of the strings reaching them. As the BWT of an NFA shares many properties with its original string variant, the transformation can be used to implement indices for locating specific patterns on the NFA itself. The efficiency of the resulting index is influenced by the width of the partial order on the states: the smaller the width, the faster the index. The most efficient index for arbitrary NFAs currently known in the literature is based on the coarsest forward-stable co-lex (CFS) order of Becker et al. [SPIRE '24]. In this paper, we prove that this CFS order can be encoded within linear space in the number of states in the automaton. The importance of this result stems from the fact that encoding such an order in linear space represents a big first step in the direction of building the index based on this order in near-linear time - the biggest open research question in this context. The currently most efficient known algorithm for this task run in quadratic time in the number of transitions in the NFA and are thus infeasible to run on very large graphs (e.g., pangenome graphs). At this point, a near-linear time algorithm is solely known for the simpler case of deterministic automata [Becker et al., ESA '23] and, in fact, this algorithmic result was enabled by a linear space encoding for deterministic automata [Kim et al., CPM '23].
Cite as

Ruben Becker, Nicola Cotumaccio, Sung-Hwan Kim, Nicola Prezza, and Carlo Tosoni. Encoding Co-Lex Orders of Finite-State Automata in Linear Space. In 36th Annual Symposium on Combinatorial Pattern Matching (CPM 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 331, pp. 15:1-15:17, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{becker_et_al:LIPIcs.CPM.2025.15,
  author =	{Becker, Ruben and Cotumaccio, Nicola and Kim, Sung-Hwan and Prezza, Nicola and Tosoni, Carlo},
  title =	{{Encoding Co-Lex Orders of Finite-State Automata in Linear Space}},
  booktitle =	{36th Annual Symposium on Combinatorial Pattern Matching (CPM 2025)},
  pages =	{15:1--15:17},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-369-0},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{331},
  editor =	{Bonizzoni, Paola and M\"{a}kinen, Veli},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.CPM.2025.15},
  URN =		{urn:nbn:de:0030-drops-231094},
  doi =		{10.4230/LIPIcs.CPM.2025.15},
  annote =	{Keywords: Burrows-Wheeler Transform, Co-Lexicographic Orders, Nondeterministic Finite Automata, Graph Walks}
}
Document
DOI: 10.4230/LIPIcs.STACS.2025.42
Local Enumeration: The Not-All-Equal Case

Authors: Mohit Gurumukhani, Ramamohan Paturi, Michael Saks, and Navid Talebanfard

Published in: LIPIcs, Volume 327, 42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025)

Abstract
Gurumukhani et al. (CCC'24) proposed the local enumeration problem Enum(k, t) as an approach to break the Super Strong Exponential Time Hypothesis (SSETH): for a natural number k and a parameter t, given an n-variate k-CNF with no satisfying assignment of Hamming weight less than t(n), enumerate all satisfying assignments of Hamming weight exactly t(n). Furthermore, they gave a randomized algorithm for Enum(k, t) and employed new ideas to analyze the first non-trivial case, namely k = 3. In particular, they solved Enum(3, n/2) in expected 1.598ⁿ time. A simple construction shows a lower bound of 6^{n/4} ≈ 1.565ⁿ. In this paper, we show that to break SSETH, it is sufficient to consider a simpler local enumeration problem NAE-Enum(k, t): for a natural number k and a parameter t, given an n-variate k-CNF with no satisfying assignment of Hamming weight less than t(n), enumerate all Not-All-Equal (NAE) solutions of Hamming weight exactly t(n), i.e., those that satisfy and falsify some literal in every clause. We refine the algorithm of Gurumukhani et al. and show that it optimally solves NAE-Enum(3, n/2), namely, in expected time poly(n) ⋅ 6^{n/4}.
Cite as

Mohit Gurumukhani, Ramamohan Paturi, Michael Saks, and Navid Talebanfard. Local Enumeration: The Not-All-Equal Case. In 42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 327, pp. 42:1-42:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{gurumukhani_et_al:LIPIcs.STACS.2025.42,
  author =	{Gurumukhani, Mohit and Paturi, Ramamohan and Saks, Michael and Talebanfard, Navid},
  title =	{{Local Enumeration: The Not-All-Equal Case}},
  booktitle =	{42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025)},
  pages =	{42:1--42:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-365-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{327},
  editor =	{Beyersdorff, Olaf and Pilipczuk, Micha{\l} and Pimentel, Elaine and Thắng, Nguy\~{ê}n Kim},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2025.42},
  URN =		{urn:nbn:de:0030-drops-228680},
  doi =		{10.4230/LIPIcs.STACS.2025.42},
  annote =	{Keywords: Depth 3 circuits, k-CNF satisfiability, Circuit lower bounds, Majority function}
}
Document
DOI: 10.4230/LIPIcs.STACS.2025.71
Unfairly Splitting Separable Necklaces

Authors: Patrick Schnider, Linus Stalder, and Simon Weber

Published in: LIPIcs, Volume 327, 42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025)

Abstract
The Necklace Splitting problem is a classical problem in combinatorics that has been intensively studied both from a combinatorial and a computational point of view. It is well-known that the Necklace Splitting problem reduces to the discrete Ham Sandwich problem. This reduction was crucial in the proof of PPA-completeness of the Ham Sandwich problem. Recently, Borzechowski, Schnider and Weber [ISAAC'23] introduced a variant of Necklace Splitting that similarly reduces to the α-Ham Sandwich problem, which lies in the complexity class UEOPL but is not known to be complete. To make this reduction work, the input necklace is guaranteed to be n-separable. They showed that these necklaces can be fairly split in polynomial time and thus this subproblem cannot be used to prove UEOPL-hardness for α-Ham Sandwich. We consider the more general unfair necklace splitting problem on n-separable necklaces, i.e., the problem of splitting these necklaces such that each thief gets a desired fraction of each type of jewels. This more general problem is the natural necklace-splitting-type version of α-Ham Sandwich, and its complexity status is one of the main open questions posed by Borzechowski, Schnider and Weber. We show that the unfair splitting problem is also polynomial-time solvable, and can thus also not be used to show UEOPL-hardness for α-Ham Sandwich.
Cite as

Patrick Schnider, Linus Stalder, and Simon Weber. Unfairly Splitting Separable Necklaces. In 42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025). Leibniz International Proceedings in Informatics (LIPIcs), Volume 327, pp. 71:1-71:19, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2025)

Copy BibTex To Clipboard

@InProceedings{schnider_et_al:LIPIcs.STACS.2025.71,
  author =	{Schnider, Patrick and Stalder, Linus and Weber, Simon},
  title =	{{Unfairly Splitting Separable Necklaces}},
  booktitle =	{42nd International Symposium on Theoretical Aspects of Computer Science (STACS 2025)},
  pages =	{71:1--71:19},
  series =	{Leibniz International Proceedings in Informatics (LIPIcs)},
  ISBN =	{978-3-95977-365-2},
  ISSN =	{1868-8969},
  year =	{2025},
  volume =	{327},
  editor =	{Beyersdorff, Olaf and Pilipczuk, Micha{\l} and Pimentel, Elaine and Thắng, Nguy\~{ê}n Kim},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.STACS.2025.71},
  URN =		{urn:nbn:de:0030-drops-228963},
  doi =		{10.4230/LIPIcs.STACS.2025.71},
  annote =	{Keywords: Necklace splitting, n-separability, well-separation, Ham Sandwich, alpha-Ham Sandwich, unfair splitting, fair division}
}
  • Refine by Type
  • 90 Document/PDF
  • 18 Document/HTML
  • 1 Volume

  • Refine by Publication Year
  • 2 2026
  • 16 2025
  • 3 2024
  • 63 2023
  • 1 2020
  • Show More...

  • Refine by Author
  • 14 Kakimura, Naonori
  • 9 Kobayashi, Yusuke
  • 6 Ito, Takehiro
  • 5 Kamiyama, Naoyuki
  • 5 Okamoto, Yoshio
  • Show More...

  • Refine by Series/Journal
  • 89 LIPIcs
  • 1 OASIcs

  • Refine by Classification
  • 17 Theory of computation → Design and analysis of algorithms
  • 12 Theory of computation → Graph algorithms analysis
  • 8 Theory of computation → Computational geometry
  • 7 Mathematics of computing → Graph algorithms
  • 7 Theory of computation → Parameterized complexity and exact algorithms
  • Show More...

  • Refine by Keyword
  • 5 parameterized complexity
  • 3 Burrows-Wheeler Transform
  • 3 NP-hardness
  • 3 combinatorial reconfiguration
  • 2 Approximation Algorithms
  • Show More...

Any Issues?
X

Feedback on the Current Page

CAPTCHA

Thanks for your feedback!

Feedback submitted to Dagstuhl Publishing

Could not send message

Please try again later or send an E-mail
© 2023-2026 Schloss Dagstuhl – LZI GmbH Schloss Dagstuhl – LZI GmbH About DROPS Imprint Privacy Contact